RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 TRNT1Q96Q11 434 aaKnown RBP2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 OR2V2Q96R30 315 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 ZNF607Q96SK3 696 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 NAPGQ99747 312 aaPredicted RBP2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 CITED2Q99967 270 aaPredicted RBP2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 ERP44Q9BS26 406 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 CHID1Q9BWS9 393 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 OR2J1Q9GZK6 312 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 NPFFR1Q9GZQ6 430 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 SIRPDQ9H106 197 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 GHITMQ9H3K2 345 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 ARMC7Q9H6L4 198 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 SIAEQ9HAT2 523 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 TMEM38BQ9NVV0 291 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 DCAF16Q9NXF7 216 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 GLTPQ9NZD2 209 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 BAIAP2L1Q9UHR4 511 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 SNX24Q9Y343 169 aa2.94□□□□□ -1.94
PDLIM5-218ENST00000513341 STARD9Q9P2P6 4700 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 TRAV36DV7A0A075B6V5 113 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 A0A087WUJ7 227 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 TEX13CA0A0J9YWL9 993 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 CBY3A6NI87 242 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 CLDN24A6NM45 220 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 CENPBD1B2RD01 187 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 CFLARO15519 480 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 TIMM8AO60220 97 aaPredicted RBP2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 CRCPO75575 148 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 C6orf47O95873 294 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 PAHP00439 452 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 ALDOBP05062 364 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 FGF4P08620 206 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 MMP7P09237 267 aaPredicted RBP2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 IRF2P14316 349 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 TCP1P17987 556 aaKnown RBP2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 GSTM3P21266 225 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 RPS4Y1P22090 263 aaKnown RBP2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 PAICSP22234 425 aaKnown RBP2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 CCNOP22674 350 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 CALRP27797 417 aaKnown RBP2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 GRPRP30550 384 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 PHBP35232 272 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 MPV17P39210 176 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 RPS5P46782 204 aaKnown RBP2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 GDI2P50395 445 aaKnown RBP2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 UBE2E1P51965 193 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 FOXA1P55317 472 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 PPP1CBP62140 327 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 ARF6P62330 175 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 HPCAP84074 193 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 GLO1Q04760 184 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 BNIP2Q12982 314 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 RBM39Q14498 530 aaKnown RBP2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 CHI3L2Q15782 390 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 HIST3H3Q16695 136 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 IZUMO4Q1ZYL8 232 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 GPAT3Q53EU6 434 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 FAM76BQ5HYJ3 339 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 LCE3AQ5TA76 89 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 IL23RQ5VWK5 629 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 WDR88Q6ZMY6 472 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 PIGWQ7Z7B1 504 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 ANKRD46Q86W74 232 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 RIMKLAQ8IXN7 391 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 PEX5LQ8IYB4 626 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 ZNF101Q8IZC7 436 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 OR8H2Q8N162 312 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 LSMEM1Q8N8F7 131 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 NPEPL1Q8NDH3 523 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 RBM15BQ8NDT2 890 aaKnown RBP2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 OR13G1Q8NGZ3 307 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 OR6X1Q8NH79 312 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 C8orf46Q8TAG6 207 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 FGFBP3Q8TAT2 258 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 SLC7A13Q8TCU3 470 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 ITLN1Q8WWA0 313 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 TAAR8Q969N4 342 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 HAVCR1Q96D42 359 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 RBMXL1Q96E39 390 aaKnown RBP2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 SLC25A44Q96H78 314 aaPredicted RBP2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 TXNDC15Q96J42 360 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 SLC35G5Q96KT7 338 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 NR1H4Q96RI1 486 aaPredicted RBP2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 KCNA7Q96RP8 456 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 DDOQ99489 341 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 SSX3Q99909 188 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 SH3GL3Q99963 347 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 DCTN5Q9BTE1 182 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 EMC6Q9BV81 110 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 FUT8Q9BYC5 575 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 SLC38A1Q9H2H9 487 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 OR51B6Q9H340 312 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 OR51I1Q9H343 314 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 SNTG1Q9NSN8 517 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 MRPL39Q9NYK5 338 aaKnown RBP2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 SLC17A7Q9P2U7 560 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 SIGLEC9Q9Y336 463 aa2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 TSSC4Q9Y5U2 329 aaPredicted RBP2.93□□□□□ -1.94
PDLIM5-218ENST00000513341 KIAA1109Q2LD37 5005 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms