RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 CIB1Q99828 191 aa11.12□□□□□ -0.63
RNF4-215ENST00000511843 C19orf24Q9BVV8 132 aa11.12□□□□□ -0.63
RNF4-215ENST00000511843 GABARAPL1Q9H0R8 117 aa11.12□□□□□ -0.63
RNF4-215ENST00000511843 C7orf69Q9H7B7 122 aa11.12□□□□□ -0.63
RNF4-215ENST00000511843 C1orf123Q9NWV4 160 aa11.12□□□□□ -0.63
RNF4-215ENST00000511843 MRPL15Q9P015 296 aaKnown RBP11.12□□□□□ -0.63
RNF4-215ENST00000511843 LAMP5Q9UJQ1 280 aa11.12□□□□□ -0.63
RNF4-215ENST00000511843 OAZ3Q9UMX2 235 aa11.12□□□□□ -0.63
RNF4-215ENST00000511843 PPIAL4AQ9Y536 164 aa11.12□□□□□ -0.63
RNF4-215ENST00000511843 ANKRD30BLA7E2S9 258 aa11.11□□□□□ -0.63
RNF4-215ENST00000511843 MAGEB4O15481 346 aaPredicted RBP11.11□□□□□ -0.63
RNF4-215ENST00000511843 TCF21O43680 179 aa11.11□□□□□ -0.63
RNF4-215ENST00000511843 VENTXO95231 258 aa11.11□□□□□ -0.63
RNF4-215ENST00000511843 EPHA1P21709 976 aa11.11□□□□□ -0.63
RNF4-215ENST00000511843 ACKR3P25106 362 aa11.11□□□□□ -0.63
RNF4-215ENST00000511843 PSMA6P60900 246 aaKnown RBP11.11□□□□□ -0.63
RNF4-215ENST00000511843 POU4F2Q12837 409 aa11.11□□□□□ -0.63
RNF4-215ENST00000511843 KPNB1Q14974 876 aaKnown RBP11.11□□□□□ -0.63
RNF4-215ENST00000511843 C12orf73Q69YU5 71 aa11.11□□□□□ -0.63
RNF4-215ENST00000511843 C1QL2Q7Z5L3 287 aa11.11□□□□□ -0.63
RNF4-215ENST00000511843 KRT77Q7Z794 578 aa11.11□□□□□ -0.63
RNF4-215ENST00000511843 OR8B12Q8NGG6 310 aa11.11□□□□□ -0.63
RNF4-215ENST00000511843 OR52H1Q8NGJ2 320 aa11.11□□□□□ -0.63
RNF4-215ENST00000511843 Q8TCH9 128 aa11.11□□□□□ -0.63
RNF4-215ENST00000511843 C22orf15Q8WYQ4 148 aa11.11□□□□□ -0.63
RNF4-215ENST00000511843 PAPOLGQ9BWT3 736 aaKnown RBP11.11□□□□□ -0.63
RNF4-215ENST00000511843 YIPF3Q9GZM5 350 aa11.11□□□□□ -0.63
RNF4-215ENST00000511843 SLC22A4Q9H015 551 aa11.11□□□□□ -0.63
RNF4-215ENST00000511843 OR10A2Q9H208 303 aa11.11□□□□□ -0.63
RNF4-215ENST00000511843 OPA3Q9H6K4 179 aa11.11□□□□□ -0.63
RNF4-215ENST00000511843 FN3KRPQ9HA64 309 aa11.11□□□□□ -0.63
RNF4-215ENST00000511843 RNF7Q9UBF6 113 aa11.11□□□□□ -0.63
RNF4-215ENST00000511843 RHBDD3Q9Y3P4 386 aa11.11□□□□□ -0.63
RNF4-215ENST00000511843 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.1□□□□□ -0.63
RNF4-215ENST00000511843 hCG_1807616A0A1W2PRN6 198 aa11.1□□□□□ -0.63
RNF4-215ENST00000511843 J3QLI3 93 aa11.1□□□□□ -0.63
RNF4-215ENST00000511843 APOL3O95236 402 aa11.1□□□□□ -0.63
RNF4-215ENST00000511843 APOC1P02654 83 aa11.1□□□□□ -0.63
RNF4-215ENST00000511843 FCGR1AP12314 374 aa11.1□□□□□ -0.63
RNF4-215ENST00000511843 EGR1P18146 543 aa11.1□□□□□ -0.63
RNF4-215ENST00000511843 GNB2P62879 340 aa11.1□□□□□ -0.63
RNF4-215ENST00000511843 CSNK2BP67870 215 aa11.1□□□□□ -0.63
RNF4-215ENST00000511843 LCN1P1Q5VSP4 162 aa11.1□□□□□ -0.63
RNF4-215ENST00000511843 AADACL4Q5VUY2 407 aa11.1□□□□□ -0.63
RNF4-215ENST00000511843 CCDC121Q6ZUS5 278 aa11.1□□□□□ -0.63
RNF4-215ENST00000511843 OR8S1Q8NH09 359 aa11.1□□□□□ -0.63
RNF4-215ENST00000511843 SPATA3Q8NHX4 192 aa11.1□□□□□ -0.63
RNF4-215ENST00000511843 TMEM163Q8TC26 289 aa11.1□□□□□ -0.63
RNF4-215ENST00000511843 PPP1R14AQ96A00 147 aa11.1□□□□□ -0.63
RNF4-215ENST00000511843 NEIL1Q96FI4 390 aaPredicted RBP11.1□□□□□ -0.63
RNF4-215ENST00000511843 PKP2Q99959 881 aa11.1□□□□□ -0.63
RNF4-215ENST00000511843 SSBP3Q9BWW4 388 aaPredicted RBP11.1□□□□□ -0.63
RNF4-215ENST00000511843 RIBC2Q9H4K1 309 aa11.1□□□□□ -0.63
RNF4-215ENST00000511843 OR5V1Q9UGF6 321 aa11.1□□□□□ -0.63
RNF4-215ENST00000511843 NOP16Q9Y3C1 178 aaKnown RBP11.1□□□□□ -0.63
RNF4-215ENST00000511843 IGHV3OR15-7A0A075B7D8 119 aa11.09□□□□□ -0.63
RNF4-215ENST00000511843 A8MXK9 166 aa11.09□□□□□ -0.63
RNF4-215ENST00000511843 H3BNX3 289 aa11.09□□□□□ -0.63
RNF4-215ENST00000511843 PTBP3O95758 552 aaKnown RBP11.09□□□□□ -0.63
RNF4-215ENST00000511843 ZNF12P17014 697 aa11.09□□□□□ -0.63
RNF4-215ENST00000511843 GATA3P23771 443 aa11.09□□□□□ -0.63
RNF4-215ENST00000511843 DDOSTP39656 456 aa11.09□□□□□ -0.63
RNF4-215ENST00000511843 PITPNBP48739 271 aa11.09□□□□□ -0.63
RNF4-215ENST00000511843 ELF3P78545 371 aaPredicted RBP11.09□□□□□ -0.63
RNF4-215ENST00000511843 EFNB1P98172 346 aa11.09□□□□□ -0.63
RNF4-215ENST00000511843 MFGE8Q08431 387 aaPredicted RBP11.09□□□□□ -0.63
RNF4-215ENST00000511843 ZNF154Q13106 437 aa11.09□□□□□ -0.63
RNF4-215ENST00000511843 OR8B8Q15620 311 aa11.09□□□□□ -0.63
RNF4-215ENST00000511843 DMRTC1Q5HYR2 192 aa11.09□□□□□ -0.63
RNF4-215ENST00000511843 PLEKHG7Q6ZR37 379 aa11.09□□□□□ -0.63
RNF4-215ENST00000511843 RHOUQ7L0Q8 258 aa11.09□□□□□ -0.63
RNF4-215ENST00000511843 MEPCEQ7L2J0 689 aaKnown RBP11.09□□□□□ -0.63
RNF4-215ENST00000511843 C11orf53Q8IXP5 236 aa11.09□□□□□ -0.63
RNF4-215ENST00000511843 ERGIC1Q969X5 290 aa11.09□□□□□ -0.63
RNF4-215ENST00000511843 CENPNQ96H22 339 aaPredicted RBP11.09□□□□□ -0.63
RNF4-215ENST00000511843 CNN2Q99439 309 aaKnown RBP11.09□□□□□ -0.63
RNF4-215ENST00000511843 SLC6A7Q99884 636 aa11.09□□□□□ -0.63
RNF4-215ENST00000511843 PRRG3Q9BZD7 231 aa11.09□□□□□ -0.63
RNF4-215ENST00000511843 FGF23Q9GZV9 251 aaPredicted RBP11.09□□□□□ -0.63
RNF4-215ENST00000511843 SP140LQ9H930 580 aa11.09□□□□□ -0.63
RNF4-215ENST00000511843 C14orf119Q9NWQ9 140 aa11.09□□□□□ -0.63
RNF4-215ENST00000511843 CTSZQ9UBR2 303 aa11.09□□□□□ -0.63
RNF4-215ENST00000511843 MIOXQ9UGB7 285 aa11.09□□□□□ -0.63
RNF4-215ENST00000511843 IKZF2Q9UKS7 526 aa11.09□□□□□ -0.63
RNF4-215ENST00000511843 LRCH1Q9Y2L9 728 aa11.09□□□□□ -0.63
RNF4-215ENST00000511843 POLR3KQ9Y2Y1 108 aaPredicted RBP11.09□□□□□ -0.63
RNF4-215ENST00000511843 INSIG2Q9Y5U4 225 aa11.09□□□□□ -0.63
RNF4-215ENST00000511843 IGHV3OR16-10A0A075B7F0 116 aa11.08□□□□□ -0.64
RNF4-215ENST00000511843 PPIAL4CA0A0B4J2A2 164 aa11.08□□□□□ -0.64
RNF4-215ENST00000511843 TMEM269A0A1B0GVZ9 245 aa11.08□□□□□ -0.64
RNF4-215ENST00000511843 ZNF850A8MQ14 1090 aa11.08□□□□□ -0.64
RNF4-215ENST00000511843 LGALS8O00214 317 aa11.08□□□□□ -0.64
RNF4-215ENST00000511843 FSHBP01225 129 aa11.08□□□□□ -0.64
RNF4-215ENST00000511843 GYPAP02724 150 aa11.08□□□□□ -0.64
RNF4-215ENST00000511843 GNALP38405 381 aa11.08□□□□□ -0.64
RNF4-215ENST00000511843 CXCR4P61073 352 aa11.08□□□□□ -0.64
RNF4-215ENST00000511843 ACTR3P61158 418 aa11.08□□□□□ -0.64
RNF4-215ENST00000511843 PAX2Q02962 417 aa11.08□□□□□ -0.64
RNF4-215ENST00000511843 PRDX4Q13162 271 aa11.08□□□□□ -0.64
RNF4-215ENST00000511843 ARMCX4Q5H9R4 360 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms