RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 ZNF717Q9BY31 904 aaPredicted RBP1.91□□□□□ -2.1
TRAPPC11-207ENST00000511409 SAMD10Q9BYL1 202 aa1.91□□□□□ -2.1
TRAPPC11-207ENST00000511409 C8orf33Q9H7E9 229 aaPredicted RBP1.91□□□□□ -2.1
TRAPPC11-207ENST00000511409 DDX18Q9NVP1 670 aaKnown RBP1.91□□□□□ -2.1
TRAPPC11-207ENST00000511409 ADA2Q9NZK5 511 aa1.91□□□□□ -2.1
TRAPPC11-207ENST00000511409 CBY1Q9Y3M2 126 aa1.91□□□□□ -2.1
TRAPPC11-207ENST00000511409 BRWD3Q6RI45 1802 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 IGHV3-49A0A0A0MS15 119 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 IGHV3-72A0A0B4J1Y9 119 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 H0YIV9 168 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 K7EM74 188 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 PLIN3O60664 434 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 GATBO75879 557 aaKnown RBP1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 CDRT1O95170 752 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 SCELO95171 688 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 FARS2O95363 451 aaKnown RBP1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 IGKV1-17P01599 117 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 IGLV3-19P01714 112 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 MT-ND4P03905 459 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 DCNP07585 359 aaKnown RBP1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 SFTPCP11686 197 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 BMI1P35226 326 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 MYCNOSP40205 109 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 RAB11AP62491 216 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 ZNF616Q08AN1 781 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 NAB1Q13506 487 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 RAB11BQ15907 218 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 RPEL1Q2QD12 228 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 DNLZQ5SXM8 178 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 OR2T5Q6IEZ7 315 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 GUSBP11Q6P575 273 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 CD300LGQ6UXG3 332 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 UNQ9165/PRO28630Q6UXU0 137 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 TMPRSS11AQ6ZMR5 421 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 FAM122BQ7Z309 247 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 KIF2BQ8N4N8 673 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 TRAM1L1Q8N609 369 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 GATSQ8NAP1 163 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 OR5T1Q8NG75 326 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 OR4M1Q8NGD0 313 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 OR2T29Q8NH02 315 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 GLYATL2Q8WU03 294 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 PIH1D2Q8WWB5 315 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 TMEM159Q96B96 161 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 RCN3Q96D15 328 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 CERS2Q96G23 380 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 CSPG4P5Q96PW8 444 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 CTRCQ99895 268 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 KCNS3Q9BQ31 491 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 ULBP2Q9BZM5 246 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 NAA50Q9GZZ1 169 aaKnown RBP1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 TOLLIPQ9H0E2 274 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 BLZF1Q9H2G9 400 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 FARSAQ9Y285 508 aaKnown RBP1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 COMMD3-BMI1R4GMX3 469 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 S4R3C0 116 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 TSPOAP1O95153 1857 aa1.9□□□□□ -2.11
TRAPPC11-207ENST00000511409 IGKV1-27A0A075B6S5 117 aa1.89□□□□□ -2.11
TRAPPC11-207ENST00000511409 A0A1B0GTQ1 180 aa1.89□□□□□ -2.11
TRAPPC11-207ENST00000511409 SPRR5A0A1B0GTR4 108 aa1.89□□□□□ -2.11
TRAPPC11-207ENST00000511409 GOLGA8JA6NMD2 632 aa1.89□□□□□ -2.11
TRAPPC11-207ENST00000511409 BTNL10A8MVZ5 291 aa1.89□□□□□ -2.11
TRAPPC11-207ENST00000511409 TAAR5O14804 337 aa1.89□□□□□ -2.11
TRAPPC11-207ENST00000511409 CASC3O15234 703 aaKnown RBP1.89□□□□□ -2.11
TRAPPC11-207ENST00000511409 ERI3O43414 337 aaKnown RBP1.89□□□□□ -2.11
TRAPPC11-207ENST00000511409 CATP04040 527 aaKnown RBP1.89□□□□□ -2.11
TRAPPC11-207ENST00000511409 RPN2P04844 631 aa1.89□□□□□ -2.11
TRAPPC11-207ENST00000511409 GOLGA8HP0CJ92 632 aa1.89□□□□□ -2.11
TRAPPC11-207ENST00000511409 PCK1P35558 622 aa1.89□□□□□ -2.11
TRAPPC11-207ENST00000511409 PRLHRP49683 370 aa1.89□□□□□ -2.11
TRAPPC11-207ENST00000511409 BCAP31P51572 246 aa1.89□□□□□ -2.11
TRAPPC11-207ENST00000511409 PSMD4P55036 377 aaKnown RBP1.89□□□□□ -2.11
TRAPPC11-207ENST00000511409 YWHAEP62258 255 aaKnown RBP1.89□□□□□ -2.11
TRAPPC11-207ENST00000511409 TSC22D1Q15714 1073 aa1.89□□□□□ -2.11
TRAPPC11-207ENST00000511409 SLC25A35Q3KQZ1 300 aa1.89□□□□□ -2.11
TRAPPC11-207ENST00000511409 HIKESHIQ53FT3 197 aa1.89□□□□□ -2.11
TRAPPC11-207ENST00000511409 MLIPQ5VWP3 458 aa1.89□□□□□ -2.11
TRAPPC11-207ENST00000511409 Q6ZSR6 202 aa1.89□□□□□ -2.11
TRAPPC11-207ENST00000511409 ERO1BQ86YB8 467 aa1.89□□□□□ -2.11
TRAPPC11-207ENST00000511409 RAB43Q86YS6 212 aa1.89□□□□□ -2.11
TRAPPC11-207ENST00000511409 TMEM105Q8N8V8 129 aa1.89□□□□□ -2.11
TRAPPC11-207ENST00000511409 DCAKDQ8WVC6 231 aa1.89□□□□□ -2.11
TRAPPC11-207ENST00000511409 C17orf50Q8WW18 174 aa1.89□□□□□ -2.11
TRAPPC11-207ENST00000511409 ISOC2Q96AB3 205 aa1.89□□□□□ -2.11
TRAPPC11-207ENST00000511409 OR4K3Q96R72 315 aa1.89□□□□□ -2.11
TRAPPC11-207ENST00000511409 MARVELD1Q9BSK0 173 aa1.89□□□□□ -2.11
TRAPPC11-207ENST00000511409 NUDT9Q9BW91 350 aa1.89□□□□□ -2.11
TRAPPC11-207ENST00000511409 OSBPL11Q9BXB4 747 aa1.89□□□□□ -2.11
TRAPPC11-207ENST00000511409 DEFB129Q9H1M3 183 aa1.89□□□□□ -2.11
TRAPPC11-207ENST00000511409 NCOR1P1Q9H4R4 102 aa1.89□□□□□ -2.11
TRAPPC11-207ENST00000511409 PSME2Q9UL46 239 aa1.89□□□□□ -2.11
TRAPPC11-207ENST00000511409 SIGLEC9Q9Y336 463 aa1.89□□□□□ -2.11
TRAPPC11-207ENST00000511409 SCN1AP35498 2009 aa1.89□□□□□ -2.11
TRAPPC11-207ENST00000511409 ANKRD12Q6UB98 2062 aa1.89□□□□□ -2.11
TRAPPC11-207ENST00000511409 AHDC1Q5TGY3 1603 aaPredicted RBP1.88□□□□□ -2.11
TRAPPC11-207ENST00000511409 A0A1B0GUH1 482 aa1.88□□□□□ -2.11
TRAPPC11-207ENST00000511409 M0R1X1 148 aa1.88□□□□□ -2.11
TRAPPC11-207ENST00000511409 LGALS9O00182 355 aa1.88□□□□□ -2.11
TRAPPC11-207ENST00000511409 MANBAO00462 879 aa1.88□□□□□ -2.11
TRAPPC11-207ENST00000511409 ZBTB5O15062 677 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms