RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 SMN1Q16637 294 aaKnown RBP17.08■□□□□ 0.32
HOXC6-204ENST00000509328 KLHL22Q53GT1 634 aa17.08■□□□□ 0.32
HOXC6-204ENST00000509328 LIPNQ5VXI9 398 aa17.08■□□□□ 0.32
HOXC6-204ENST00000509328 FAM220AQ7Z4H9 259 aa17.08■□□□□ 0.32
HOXC6-204ENST00000509328 KCTD20Q7Z5Y7 419 aa17.08■□□□□ 0.32
HOXC6-204ENST00000509328 KLBQ86Z14 1044 aa17.08■□□□□ 0.32
HOXC6-204ENST00000509328 C8orf59Q8N0T1 100 aaPredicted RBP17.08■□□□□ 0.32
HOXC6-204ENST00000509328 CELF2-AS1Q8N7Q2 184 aa17.08■□□□□ 0.32
HOXC6-204ENST00000509328 CNIH3Q8TBE1 160 aa17.08■□□□□ 0.32
HOXC6-204ENST00000509328 CCL17Q92583 94 aa17.08■□□□□ 0.32
HOXC6-204ENST00000509328 MEGF10Q96KG7 1140 aa17.08■□□□□ 0.32
HOXC6-204ENST00000509328 MYCBPQ99417 103 aaPredicted RBP17.08■□□□□ 0.32
HOXC6-204ENST00000509328 ADAT1Q9BUB4 502 aaKnown RBP17.08■□□□□ 0.32
HOXC6-204ENST00000509328 VCX3BQ9H321 246 aa17.08■□□□□ 0.32
HOXC6-204ENST00000509328 G6PC2Q9NQR9 355 aa17.08■□□□□ 0.32
HOXC6-204ENST00000509328 OR52A1Q9UKL2 312 aa17.08■□□□□ 0.32
HOXC6-204ENST00000509328 GTF2A1LQ9UNN4 478 aa17.08■□□□□ 0.32
HOXC6-204ENST00000509328 TEP1Q99973 2627 aaKnown RBP17.07■□□□□ 0.32
HOXC6-204ENST00000509328 IGHV4-61A0A0C4DH41 118 aa17.07■□□□□ 0.32
HOXC6-204ENST00000509328 CLDN25C9JDP6 229 aa17.07■□□□□ 0.32
HOXC6-204ENST00000509328 RPP14O95059 124 aaKnown RBP17.07■□□□□ 0.32
HOXC6-204ENST00000509328 TTRP02766 147 aa17.07■□□□□ 0.32
HOXC6-204ENST00000509328 TACSTD2P09758 323 aa17.07■□□□□ 0.32
HOXC6-204ENST00000509328 SLC3A1Q07837 685 aa17.07■□□□□ 0.32
HOXC6-204ENST00000509328 CDONQ4KMG0 1287 aa17.07■□□□□ 0.32
HOXC6-204ENST00000509328 TP53I3Q53FA7 332 aa17.07■□□□□ 0.32
HOXC6-204ENST00000509328 BCL2L15Q5TBC7 163 aa17.07■□□□□ 0.32
HOXC6-204ENST00000509328 FTMTQ8N4E7 242 aa17.07■□□□□ 0.32
HOXC6-204ENST00000509328 TFAP2CQ92754 450 aa17.07■□□□□ 0.32
HOXC6-204ENST00000509328 MRPL48Q96GC5 212 aaKnown RBP17.07■□□□□ 0.32
HOXC6-204ENST00000509328 SMR3AQ99954 134 aa17.07■□□□□ 0.32
HOXC6-204ENST00000509328 INPP5EQ9NRR6 644 aa17.07■□□□□ 0.32
HOXC6-204ENST00000509328 TREM2Q9NZC2 230 aa17.07■□□□□ 0.32
HOXC6-204ENST00000509328 GNG8Q9UK08 70 aa17.07■□□□□ 0.32
HOXC6-204ENST00000509328 PPP1R3CQ9UQK1 317 aa17.07■□□□□ 0.32
HOXC6-204ENST00000509328 ZANQ9Y493 2812 aa17.06■□□□□ 0.32
HOXC6-204ENST00000509328 ATP6V1G2O95670 118 aa17.06■□□□□ 0.32
HOXC6-204ENST00000509328 IGLV3-1P01715 115 aa17.06■□□□□ 0.32
HOXC6-204ENST00000509328 IGHA1P01876 353 aa17.06■□□□□ 0.32
HOXC6-204ENST00000509328 GNAO1P09471 354 aa17.06■□□□□ 0.32
HOXC6-204ENST00000509328 CD200P41217 278 aa17.06■□□□□ 0.32
HOXC6-204ENST00000509328 CHN2P52757 468 aa17.06■□□□□ 0.32
HOXC6-204ENST00000509328 AQP4P55087 323 aa17.06■□□□□ 0.32
HOXC6-204ENST00000509328 ACTA2P62736 377 aa17.06■□□□□ 0.32
HOXC6-204ENST00000509328 ACTG2P63267 376 aa17.06■□□□□ 0.32
HOXC6-204ENST00000509328 COMMD2Q86X83 199 aa17.06■□□□□ 0.32
HOXC6-204ENST00000509328 ELMOD2Q8IZ81 293 aa17.06■□□□□ 0.32
HOXC6-204ENST00000509328 SPERTQ8NA61 448 aa17.06■□□□□ 0.32
HOXC6-204ENST00000509328 OR52I1Q8NGK6 324 aa17.06■□□□□ 0.32
HOXC6-204ENST00000509328 OR51E1Q8TCB6 317 aa17.06■□□□□ 0.32
HOXC6-204ENST00000509328 RORBQ92753 470 aa17.06■□□□□ 0.32
HOXC6-204ENST00000509328 PPP1R14AQ96A00 147 aa17.06■□□□□ 0.32
HOXC6-204ENST00000509328 TIMD4Q96H15 378 aa17.06■□□□□ 0.32
HOXC6-204ENST00000509328 GSX1Q9H4S2 264 aaPredicted RBP17.06■□□□□ 0.32
HOXC6-204ENST00000509328 GCM1Q9NP62 436 aa17.06■□□□□ 0.32
HOXC6-204ENST00000509328 MYRFQ9Y2G1 1151 aa17.06■□□□□ 0.32
HOXC6-204ENST00000509328 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.05■□□□□ 0.32
HOXC6-204ENST00000509328 IRGMA1A4Y4 181 aa17.05■□□□□ 0.32
HOXC6-204ENST00000509328 IFNL4K9M1U5 179 aa17.05■□□□□ 0.32
HOXC6-204ENST00000509328 FAM20BO75063 409 aa17.05■□□□□ 0.32
HOXC6-204ENST00000509328 ATP6V1B1P15313 513 aa17.05■□□□□ 0.32
HOXC6-204ENST00000509328 ACKR3P25106 362 aa17.05■□□□□ 0.32
HOXC6-204ENST00000509328 GATA4P43694 442 aa17.05■□□□□ 0.32
HOXC6-204ENST00000509328 MAP2K3P46734 347 aa17.05■□□□□ 0.32
HOXC6-204ENST00000509328 MZT1Q08AG7 82 aa17.05■□□□□ 0.32
HOXC6-204ENST00000509328 MAB21L1Q13394 359 aa17.05■□□□□ 0.32
HOXC6-204ENST00000509328 GALEQ14376 348 aa17.05■□□□□ 0.32
HOXC6-204ENST00000509328 CLEC9AQ6UXN8 241 aa17.05■□□□□ 0.32
HOXC6-204ENST00000509328 CATSPERDQ86XM0 798 aa17.05■□□□□ 0.32
HOXC6-204ENST00000509328 RAB1CQ92928 201 aa17.05■□□□□ 0.32
HOXC6-204ENST00000509328 SOX7Q9BT81 388 aa17.05■□□□□ 0.32
HOXC6-204ENST00000509328 FGF20Q9NP95 211 aaPredicted RBP17.05■□□□□ 0.32
HOXC6-204ENST00000509328 GPR84Q9NQS5 396 aa17.05■□□□□ 0.32
HOXC6-204ENST00000509328 TMEM106BQ9NUM4 274 aa17.05■□□□□ 0.32
HOXC6-204ENST00000509328 ACOXLQ9NUZ1 547 aa17.05■□□□□ 0.32
HOXC6-204ENST00000509328 LY6G6DO95868 133 aa17.04■□□□□ 0.32
HOXC6-204ENST00000509328 GNALP38405 381 aa17.04■□□□□ 0.32
HOXC6-204ENST00000509328 TMEM249Q2WGJ8 235 aa17.04■□□□□ 0.32
HOXC6-204ENST00000509328 PEG10Q86TG7 708 aaKnown RBP17.04■□□□□ 0.32
HOXC6-204ENST00000509328 LHFPL3Q86UP9 236 aa17.04■□□□□ 0.32
HOXC6-204ENST00000509328 EGFL6Q8IUX8 553 aa17.04■□□□□ 0.32
HOXC6-204ENST00000509328 FBLIM1Q8WUP2 373 aa17.04■□□□□ 0.32
HOXC6-204ENST00000509328 DVL3Q92997 716 aaPredicted RBP17.04■□□□□ 0.32
HOXC6-204ENST00000509328 ERGIC1Q969X5 290 aa17.04■□□□□ 0.32
HOXC6-204ENST00000509328 ALG8Q9BVK2 526 aa17.04■□□□□ 0.32
HOXC6-204ENST00000509328 PAPOLGQ9BWT3 736 aaKnown RBP17.04■□□□□ 0.32
HOXC6-204ENST00000509328 ABCB9Q9NP78 766 aa17.04■□□□□ 0.32
HOXC6-204ENST00000509328 C14orf119Q9NWQ9 140 aa17.04■□□□□ 0.32
HOXC6-204ENST00000509328 ERVK13-1Q9NX77 482 aa17.04■□□□□ 0.32
HOXC6-204ENST00000509328 SLC22A13Q9Y226 551 aa17.04■□□□□ 0.32
HOXC6-204ENST00000509328 RHBDD3Q9Y3P4 386 aa17.04■□□□□ 0.32
HOXC6-204ENST00000509328 MPC1Q9Y5U8 109 aa17.04■□□□□ 0.32
HOXC6-204ENST00000509328 ABCA1O95477 2261 aa17.04■□□□□ 0.32
HOXC6-204ENST00000509328 MTRF1O75570 445 aaKnown RBP17.03■□□□□ 0.32
HOXC6-204ENST00000509328 CST4P01036 141 aa17.03■□□□□ 0.32
HOXC6-204ENST00000509328 HEXAP06865 529 aa17.03■□□□□ 0.32
HOXC6-204ENST00000509328 OR12D2P58182 307 aa17.03■□□□□ 0.32
HOXC6-204ENST00000509328 MVKQ03426 396 aa17.03■□□□□ 0.32
HOXC6-204ENST00000509328 C6orf52Q5T4I8 152 aa17.03■□□□□ 0.32
HOXC6-204ENST00000509328 AVPI1Q5T686 147 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms