RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 FOXN2P32314 431 aa6.45□□□□□ -1.38
PDGFRA-206ENST00000508170 VHLP40337 213 aa6.45□□□□□ -1.38
PDGFRA-206ENST00000508170 HCCSP53701 268 aa6.45□□□□□ -1.38
PDGFRA-206ENST00000508170 CKS1BP61024 79 aa6.45□□□□□ -1.38
PDGFRA-206ENST00000508170 DOC2BQ14184 412 aa6.45□□□□□ -1.38
PDGFRA-206ENST00000508170 SPDYE7PQ495Y7 208 aa6.45□□□□□ -1.38
PDGFRA-206ENST00000508170 LRRC37A5PQ49AS3 106 aa6.45□□□□□ -1.38
PDGFRA-206ENST00000508170 PYCR3Q53H96 274 aa6.45□□□□□ -1.38
PDGFRA-206ENST00000508170 TMEM97Q5BJF2 176 aa6.45□□□□□ -1.38
PDGFRA-206ENST00000508170 ZBTB8OSQ8IWT0 167 aa6.45□□□□□ -1.38
PDGFRA-206ENST00000508170 OR6T1Q8NGN1 323 aa6.45□□□□□ -1.38
PDGFRA-206ENST00000508170 MRPL24Q96A35 216 aaKnown RBP6.45□□□□□ -1.38
PDGFRA-206ENST00000508170 PNPLA2Q96AD5 504 aa6.45□□□□□ -1.38
PDGFRA-206ENST00000508170 FKBP10Q96AY3 582 aa6.45□□□□□ -1.38
PDGFRA-206ENST00000508170 DYNLL2Q96FJ2 89 aa6.45□□□□□ -1.38
PDGFRA-206ENST00000508170 CCDC32Q9BV29 185 aa6.45□□□□□ -1.38
PDGFRA-206ENST00000508170 CLMPQ9H6B4 373 aa6.45□□□□□ -1.38
PDGFRA-206ENST00000508170 APOBEC3GQ9HC16 384 aaKnown RBP6.45□□□□□ -1.38
PDGFRA-206ENST00000508170 FAM206AQ9NX38 181 aa6.45□□□□□ -1.38
PDGFRA-206ENST00000508170 OR12D3Q9UGF7 316 aa6.45□□□□□ -1.38
PDGFRA-206ENST00000508170 GPR160Q9UJ42 338 aa6.45□□□□□ -1.38
PDGFRA-206ENST00000508170 KCNS2Q9ULS6 477 aa6.45□□□□□ -1.38
PDGFRA-206ENST00000508170 TP53TG1Q9Y2A0 90 aa6.45□□□□□ -1.38
PDGFRA-206ENST00000508170 ANKRD36CQ5JPF3 1778 aa6.45□□□□□ -1.38
PDGFRA-206ENST00000508170 CNTNAP1P78357 1384 aa6.45□□□□□ -1.38
PDGFRA-206ENST00000508170 ITGB4P16144 1822 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 DVL1O14640 695 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 RGS5O15539 181 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 ZNF623O75123 536 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 SLC25A27O95847 323 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 HOXC4P09017 264 aaPredicted RBP6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 HTR1DP28221 377 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 AVPR1BP47901 424 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 EMDP50402 254 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 PITX1P78337 314 aaPredicted RBP6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 CX3CL1P78423 397 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 ZNF616Q08AN1 781 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 PPP1R1AQ13522 171 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 EDDM3AQ14507 147 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 Q75L30 129 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 TCF24Q7RTU0 167 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 FAM19A5Q7Z5A7 132 aaPredicted RBP6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 GPR135Q8IZ08 494 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 ATPAF2Q8N5M1 289 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 SLC25A43Q8WUT9 341 aaPredicted RBP6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 EEF1AKMT1Q8WVE0 214 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 RGP1Q92546 391 aaPredicted RBP6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 GHSRQ92847 366 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 OR5M11Q96RB7 305 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 PPDPFQ9H3Y8 114 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 JPT1Q9UK76 154 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 SIGLEC9Q9Y336 463 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 HS3ST3B1Q9Y662 390 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 EVPLQ92817 2033 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 LRP5O75197 1615 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 NUP98P52948 1817 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 ZCWPW2A0A1B0GU75 182 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 ANHXE9PGG2 379 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 CLIC3O95833 236 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 FOLR1P15328 257 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 PYCR1P32322 319 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 LGALS7P47929 136 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 PGFP49763 221 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 KIAA0141Q14154 515 aaPredicted RBP6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 HLA-DRB5Q30154 266 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 ZBED5Q49AG3 693 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 TMEM128Q5BJH2 165 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 GPRC6AQ5T6X5 926 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 SMARCD3Q6STE5 483 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 SHKBP1Q8TBC3 707 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 RASL10AQ92737 203 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 IRF7Q92985 503 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 ZNF385DQ9H6B1 395 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 AKTIPQ9H8T0 292 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 Q9UF83 564 aa6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 TRMT112Q9UI30 125 aaKnown RBP6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 UTP11Q9Y3A2 253 aaKnown RBP6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 RPL36Q9Y3U8 105 aaKnown RBP6.44□□□□□ -1.38
PDGFRA-206ENST00000508170 TMEM178BH3BS89 294 aa6.43□□□□□ -1.38
PDGFRA-206ENST00000508170 SYNGR1O43759 233 aa6.43□□□□□ -1.38
PDGFRA-206ENST00000508170 GYPCP04921 128 aa6.43□□□□□ -1.38
PDGFRA-206ENST00000508170 ZNF806P0C7X5 589 aa6.43□□□□□ -1.38
PDGFRA-206ENST00000508170 SSTR4P31391 388 aa6.43□□□□□ -1.38
PDGFRA-206ENST00000508170 OR3A4PP47883 348 aa6.43□□□□□ -1.38
PDGFRA-206ENST00000508170 ZFP36L2P47974 494 aaKnown RBP6.43□□□□□ -1.38
PDGFRA-206ENST00000508170 CDKN2DP55273 166 aa6.43□□□□□ -1.38
PDGFRA-206ENST00000508170 CHD4Q14839 1912 aa6.43□□□□□ -1.38
PDGFRA-206ENST00000508170 OPCMLQ14982 345 aa6.43□□□□□ -1.38
PDGFRA-206ENST00000508170 RNF212Q495C1 297 aa6.43□□□□□ -1.38
PDGFRA-206ENST00000508170 PLPP4Q5VZY2 271 aa6.43□□□□□ -1.38
PDGFRA-206ENST00000508170 HBMQ6B0K9 141 aa6.43□□□□□ -1.38
PDGFRA-206ENST00000508170 ATRAIDQ6UW56 229 aa6.43□□□□□ -1.38
PDGFRA-206ENST00000508170 YTHDF3Q7Z739 585 aaKnown RBP6.43□□□□□ -1.38
PDGFRA-206ENST00000508170 CATSPER3Q86XQ3 398 aa6.43□□□□□ -1.38
PDGFRA-206ENST00000508170 SFTPA1Q8IWL2 248 aa6.43□□□□□ -1.38
PDGFRA-206ENST00000508170 SVOPLQ8N434 492 aa6.43□□□□□ -1.38
PDGFRA-206ENST00000508170 ZADH2Q8N4Q0 377 aa6.43□□□□□ -1.38
PDGFRA-206ENST00000508170 ARRDC1Q8N5I2 433 aa6.43□□□□□ -1.38
PDGFRA-206ENST00000508170 PRELID2Q8N945 189 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms