RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 LY86O95711 162 aa15.17■□□□□ 0.02
SQSTM1-211ENST00000506690 SFTPBP07988 381 aa15.17■□□□□ 0.02
SQSTM1-211ENST00000506690 LMO1P25800 156 aa15.17■□□□□ 0.02
SQSTM1-211ENST00000506690 ACTR1BP42025 376 aa15.17■□□□□ 0.02
SQSTM1-211ENST00000506690 RPS23P62266 143 aaKnown RBP15.17■□□□□ 0.02
SQSTM1-211ENST00000506690 GLO1Q04760 184 aa15.17■□□□□ 0.02
SQSTM1-211ENST00000506690 KIAA0141Q14154 515 aaPredicted RBP15.17■□□□□ 0.02
SQSTM1-211ENST00000506690 TOMM34Q15785 309 aaPredicted RBP15.17■□□□□ 0.02
SQSTM1-211ENST00000506690 SGCBQ16585 318 aa15.17■□□□□ 0.02
SQSTM1-211ENST00000506690 CDPF1Q6NVV7 123 aa15.17■□□□□ 0.02
SQSTM1-211ENST00000506690 PSRC1Q6PGN9 363 aaPredicted RBP15.17■□□□□ 0.02
SQSTM1-211ENST00000506690 COX15Q7KZN9 410 aa15.17■□□□□ 0.02
SQSTM1-211ENST00000506690 OR13G1Q8NGZ3 307 aa15.17■□□□□ 0.02
SQSTM1-211ENST00000506690 AKR7LQ8NHP1 331 aa15.17■□□□□ 0.02
SQSTM1-211ENST00000506690 ST7LQ8TDW4 575 aa15.17■□□□□ 0.02
SQSTM1-211ENST00000506690 OIT3Q8WWZ8 545 aa15.17■□□□□ 0.02
SQSTM1-211ENST00000506690 C14orf144Q96I85 54 aa15.17■□□□□ 0.02
SQSTM1-211ENST00000506690 GNRHR2Q96P88 292 aa15.17■□□□□ 0.02
SQSTM1-211ENST00000506690 OSGIN2Q9Y236 505 aa15.17■□□□□ 0.02
SQSTM1-211ENST00000506690 COA3Q9Y2R0 106 aaPredicted RBP15.17■□□□□ 0.02
SQSTM1-211ENST00000506690 ARID1BQ8NFD5 2236 aaPredicted RBP15.17■□□□□ 0.02
SQSTM1-211ENST00000506690 SCDO00767 359 aa15.17■□□□□ 0.02
SQSTM1-211ENST00000506690 DEDDO75618 318 aa15.17■□□□□ 0.02
SQSTM1-211ENST00000506690 HNRNPA1P09651 372 aaKnown RBP eCLIP15.17■□□□□ 0.02
SQSTM1-211ENST00000506690 ZNF574Q6ZN55 896 aaPredicted RBP15.17■□□□□ 0.02
SQSTM1-211ENST00000506690 ARHGEF39Q8N4T4 335 aa15.17■□□□□ 0.02
SQSTM1-211ENST00000506690 SLAMF9Q96A28 289 aa15.17■□□□□ 0.02
SQSTM1-211ENST00000506690 ADAT3Q96EY9 351 aaPredicted RBP15.17■□□□□ 0.02
SQSTM1-211ENST00000506690 PRDM13Q9H4Q3 707 aa15.17■□□□□ 0.02
SQSTM1-211ENST00000506690 PARPBPQ9NWS1 579 aa15.17■□□□□ 0.02
SQSTM1-211ENST00000506690 PPP4R1LQ9P1A2 415 aa15.17■□□□□ 0.02
SQSTM1-211ENST00000506690 C5orf42Q9H799 3197 aa15.17■□□□□ 0.02
SQSTM1-211ENST00000506690 CLPSP04118 112 aa15.16■□□□□ 0.02
SQSTM1-211ENST00000506690 CTSBP07858 339 aa15.16■□□□□ 0.02
SQSTM1-211ENST00000506690 EN2P19622 333 aaPredicted RBP15.16■□□□□ 0.02
SQSTM1-211ENST00000506690 GLRA1P23415 457 aa15.16■□□□□ 0.02
SQSTM1-211ENST00000506690 GNALP38405 381 aa15.16■□□□□ 0.02
SQSTM1-211ENST00000506690 ZNF529Q6P280 563 aa15.16■□□□□ 0.02
SQSTM1-211ENST00000506690 RD3Q7Z3Z2 195 aa15.16■□□□□ 0.02
SQSTM1-211ENST00000506690 DCXRQ7Z4W1 244 aa15.16■□□□□ 0.02
SQSTM1-211ENST00000506690 SLC25A43Q8WUT9 341 aaPredicted RBP15.16■□□□□ 0.02
SQSTM1-211ENST00000506690 ZDHHC12Q96GR4 267 aa15.16■□□□□ 0.02
SQSTM1-211ENST00000506690 MARS2Q96GW9 593 aaKnown RBP15.16■□□□□ 0.02
SQSTM1-211ENST00000506690 SLC35B3Q9H1N7 401 aa15.16■□□□□ 0.02
SQSTM1-211ENST00000506690 GAR1Q9NY12 217 aaKnown RBP15.16■□□□□ 0.02
SQSTM1-211ENST00000506690 XIRP2A4UGR9 3374 aa15.16■□□□□ 0.02
SQSTM1-211ENST00000506690 SLC31A1O15431 190 aa15.16■□□□□ 0.02
SQSTM1-211ENST00000506690 SEC11BP0C7V7 166 aa15.16■□□□□ 0.02
SQSTM1-211ENST00000506690 HIST1H1DP16402 221 aaKnown RBP15.16■□□□□ 0.02
SQSTM1-211ENST00000506690 OR5H2Q8NGV7 314 aa15.16■□□□□ 0.02
SQSTM1-211ENST00000506690 OR14C36Q8NHC7 312 aa15.16■□□□□ 0.02
SQSTM1-211ENST00000506690 SLC25A36Q96CQ1 311 aa15.16■□□□□ 0.02
SQSTM1-211ENST00000506690 PRRX2Q99811 253 aa15.16■□□□□ 0.02
SQSTM1-211ENST00000506690 CCDC3Q9BQI4 270 aa15.16■□□□□ 0.02
SQSTM1-211ENST00000506690 SMIM3Q9BZL3 60 aa15.16■□□□□ 0.02
SQSTM1-211ENST00000506690 LINC01553A4QN01 128 aa15.15■□□□□ 0.02
SQSTM1-211ENST00000506690 SOCS1O15524 211 aa15.15■□□□□ 0.02
SQSTM1-211ENST00000506690 ZNF354AO60765 605 aaPredicted RBP15.15■□□□□ 0.02
SQSTM1-211ENST00000506690 RAD51DO75771 328 aa15.15■□□□□ 0.02
SQSTM1-211ENST00000506690 OR2C1O95371 312 aa15.15■□□□□ 0.02
SQSTM1-211ENST00000506690 MT-ATP6P00846 226 aa15.15■□□□□ 0.02
SQSTM1-211ENST00000506690 CXCR1P25024 350 aa15.15■□□□□ 0.02
SQSTM1-211ENST00000506690 S100A2P29034 98 aa15.15■□□□□ 0.02
SQSTM1-211ENST00000506690 MMP16P51512 607 aa15.15■□□□□ 0.02
SQSTM1-211ENST00000506690 ZNF616Q08AN1 781 aa15.15■□□□□ 0.02
SQSTM1-211ENST00000506690 PCK2Q16822 640 aa15.15■□□□□ 0.02
SQSTM1-211ENST00000506690 IAH1Q2TAA2 248 aaPredicted RBP15.15■□□□□ 0.02
SQSTM1-211ENST00000506690 DEGS2Q6QHC5 323 aa15.15■□□□□ 0.02
SQSTM1-211ENST00000506690 KCNJ16Q9NPI9 418 aa15.15■□□□□ 0.02
SQSTM1-211ENST00000506690 TUBD1Q9UJT1 453 aa15.15■□□□□ 0.02
SQSTM1-211ENST00000506690 SRPK3Q9UPE1 567 aa15.15■□□□□ 0.02
SQSTM1-211ENST00000506690 ARHGEF17Q96PE2 2063 aaPredicted RBP15.15■□□□□ 0.02
SQSTM1-211ENST00000506690 A0A0J9YY10 115 aa15.15■□□□□ 0.02
SQSTM1-211ENST00000506690 MASP2O00187 686 aa15.15■□□□□ 0.02
SQSTM1-211ENST00000506690 UTS2O95399 124 aa15.15■□□□□ 0.02
SQSTM1-211ENST00000506690 IL33O95760 270 aa15.15■□□□□ 0.02
SQSTM1-211ENST00000506690 IGHMP01871 453 aa15.15■□□□□ 0.02
SQSTM1-211ENST00000506690 RNF224P0DH78 156 aa15.15■□□□□ 0.02
SQSTM1-211ENST00000506690 RNH1P13489 461 aaKnown RBP15.15■□□□□ 0.02
SQSTM1-211ENST00000506690 MYOGP15173 224 aa15.15■□□□□ 0.02
SQSTM1-211ENST00000506690 CRABP1P29762 137 aa15.15■□□□□ 0.02
SQSTM1-211ENST00000506690 TMEM50BP56557 158 aa15.15■□□□□ 0.02
SQSTM1-211ENST00000506690 C1orf140Q5VVS0 124 aa15.15■□□□□ 0.02
SQSTM1-211ENST00000506690 POMZP3Q6PJE2 187 aa15.15■□□□□ 0.02
SQSTM1-211ENST00000506690 TMEM104Q8NE00 496 aa15.15■□□□□ 0.02
SQSTM1-211ENST00000506690 SLC26A10Q8NG04 563 aa15.15■□□□□ 0.02
SQSTM1-211ENST00000506690 OR10H5Q8NGA6 315 aa15.15■□□□□ 0.02
SQSTM1-211ENST00000506690 CD300LFQ8TDQ1 290 aa15.15■□□□□ 0.02
SQSTM1-211ENST00000506690 S100A13Q99584 98 aa15.15■□□□□ 0.02
SQSTM1-211ENST00000506690 PRTFDC1Q9NRG1 225 aa15.15■□□□□ 0.02
SQSTM1-211ENST00000506690 LUZP4Q9P127 313 aa15.15■□□□□ 0.02
SQSTM1-211ENST00000506690 PLRG1O43660 514 aaKnown RBP15.14■□□□□ 0.01
SQSTM1-211ENST00000506690 DXOO77932 396 aaKnown RBP15.14■□□□□ 0.01
SQSTM1-211ENST00000506690 HIST1H1BP16401 226 aaKnown RBP15.14■□□□□ 0.01
SQSTM1-211ENST00000506690 SUCLG1P53597 346 aaKnown RBP15.14■□□□□ 0.01
SQSTM1-211ENST00000506690 RAP1AP62834 184 aa15.14■□□□□ 0.01
SQSTM1-211ENST00000506690 ERV3-1Q14264 604 aa15.14■□□□□ 0.01
SQSTM1-211ENST00000506690 FAM78AQ5JUQ0 283 aa15.14■□□□□ 0.01
SQSTM1-211ENST00000506690 C7orf61Q8IZ16 206 aa15.14■□□□□ 0.01
SQSTM1-211ENST00000506690 ZNF101Q8IZC7 436 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms