RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 C2orf50Q96LR7 162 aa13.25□□□□□ -0.29
SNF8-203ENST00000504000 RTBDNQ9BSG5 229 aaPredicted RBP13.25□□□□□ -0.29
SNF8-203ENST00000504000 PCED1AQ9H1Q7 454 aa13.25□□□□□ -0.29
SNF8-203ENST00000504000 SLC26A1Q9H2B4 701 aa13.25□□□□□ -0.29
SNF8-203ENST00000504000 UNC80Q8N2C7 3258 aa13.25□□□□□ -0.29
SNF8-203ENST00000504000 IGLV3-12A0A075B6K2 115 aa13.25□□□□□ -0.29
SNF8-203ENST00000504000 METTL12A8MUP2 240 aa13.25□□□□□ -0.29
SNF8-203ENST00000504000 SOCS1O15524 211 aa13.25□□□□□ -0.29
SNF8-203ENST00000504000 MTRF1O75570 445 aaKnown RBP13.25□□□□□ -0.29
SNF8-203ENST00000504000 IGHG1P01857 330 aa13.25□□□□□ -0.29
SNF8-203ENST00000504000 CSTBP04080 98 aaKnown RBP13.25□□□□□ -0.29
SNF8-203ENST00000504000 PGA4P0DJD7 388 aa13.25□□□□□ -0.29
SNF8-203ENST00000504000 PGA3P0DJD8 388 aa13.25□□□□□ -0.29
SNF8-203ENST00000504000 ZNF17P17021 662 aa13.25□□□□□ -0.29
SNF8-203ENST00000504000 ECI1P42126 302 aa13.25□□□□□ -0.29
SNF8-203ENST00000504000 PPA1Q15181 289 aa13.25□□□□□ -0.29
SNF8-203ENST00000504000 MST1LQ2TV78 715 aa13.25□□□□□ -0.29
SNF8-203ENST00000504000 SHEQ5VZ18 495 aa13.25□□□□□ -0.29
SNF8-203ENST00000504000 H3F3CQ6NXT2 135 aa13.25□□□□□ -0.29
SNF8-203ENST00000504000 ZNF784Q8NCA9 323 aaPredicted RBP13.25□□□□□ -0.29
SNF8-203ENST00000504000 TMEM104Q8NE00 496 aa13.25□□□□□ -0.29
SNF8-203ENST00000504000 NOXO1Q8NFA2 376 aa13.25□□□□□ -0.29
SNF8-203ENST00000504000 OR4A4PQ8NGN8 299 aa13.25□□□□□ -0.29
SNF8-203ENST00000504000 OR5H2Q8NGV7 314 aa13.25□□□□□ -0.29
SNF8-203ENST00000504000 TMEM41AQ96HV5 264 aa13.25□□□□□ -0.29
SNF8-203ENST00000504000 MLXQ9UH92 298 aa13.25□□□□□ -0.29
SNF8-203ENST00000504000 OSGIN2Q9Y236 505 aa13.25□□□□□ -0.29
SNF8-203ENST00000504000 RP1P56715 2156 aa13.25□□□□□ -0.29
SNF8-203ENST00000504000 PCDH15Q96QU1 1955 aa13.24□□□□□ -0.29
SNF8-203ENST00000504000 LOC102725191A0A1B0GVB3 256 aa13.24□□□□□ -0.29
SNF8-203ENST00000504000 FOXI3A8MTJ6 420 aaPredicted RBP13.24□□□□□ -0.29
SNF8-203ENST00000504000 MPIG6BO95866 241 aa13.24□□□□□ -0.29
SNF8-203ENST00000504000 GIMD1P0DJR0 217 aa13.24□□□□□ -0.29
SNF8-203ENST00000504000 PVALBP20472 110 aaPredicted RBP13.24□□□□□ -0.29
SNF8-203ENST00000504000 BCKDHBP21953 392 aa13.24□□□□□ -0.29
SNF8-203ENST00000504000 RFC3P40938 356 aa13.24□□□□□ -0.29
SNF8-203ENST00000504000 CAV2P51636 162 aa13.24□□□□□ -0.29
SNF8-203ENST00000504000 GABREP78334 506 aa13.24□□□□□ -0.29
SNF8-203ENST00000504000 CTAG1AP78358 180 aa13.24□□□□□ -0.29
SNF8-203ENST00000504000 FOXF1Q12946 379 aa13.24□□□□□ -0.29
SNF8-203ENST00000504000 DEFB133Q30KQ1 61 aa13.24□□□□□ -0.29
SNF8-203ENST00000504000 SLC25A47Q6Q0C1 308 aa13.24□□□□□ -0.29
SNF8-203ENST00000504000 LANCL3Q6ZV70 420 aa13.24□□□□□ -0.29
SNF8-203ENST00000504000 UEVLDQ8IX04 471 aa13.24□□□□□ -0.29
SNF8-203ENST00000504000 NFAM1Q8NET5 270 aaPredicted RBP13.24□□□□□ -0.29
SNF8-203ENST00000504000 OR2I1PQ8NGU4 316 aa13.24□□□□□ -0.29
SNF8-203ENST00000504000 OR6X1Q8NH79 312 aa13.24□□□□□ -0.29
SNF8-203ENST00000504000 TMED6Q8WW62 240 aa13.24□□□□□ -0.29
SNF8-203ENST00000504000 EMG1Q92979 244 aaKnown RBP13.24□□□□□ -0.29
SNF8-203ENST00000504000 ZC3H10Q96K80 434 aaKnown RBP13.24□□□□□ -0.29
SNF8-203ENST00000504000 SLC5A7Q9GZV3 580 aa13.24□□□□□ -0.29
SNF8-203ENST00000504000 TLNRD1Q9H1K6 362 aa13.24□□□□□ -0.29
SNF8-203ENST00000504000 SDHAF3Q9NRP4 125 aa13.24□□□□□ -0.29
SNF8-203ENST00000504000 MEMO1Q9Y316 297 aa13.24□□□□□ -0.29
SNF8-203ENST00000504000 POMT1Q9Y6A1 747 aa13.24□□□□□ -0.29
SNF8-203ENST00000504000 PQLC2LA1A4F0 135 aa13.23□□□□□ -0.29
SNF8-203ENST00000504000 DUX1O43812 170 aa13.23□□□□□ -0.29
SNF8-203ENST00000504000 PRF1P14222 555 aa13.23□□□□□ -0.29
SNF8-203ENST00000504000 FOLR1P15328 257 aa13.23□□□□□ -0.29
SNF8-203ENST00000504000 RPS2P15880 293 aaKnown RBP13.23□□□□□ -0.29
SNF8-203ENST00000504000 FKBP2P26885 142 aaKnown RBP13.23□□□□□ -0.29
SNF8-203ENST00000504000 P2RY4P51582 365 aa13.23□□□□□ -0.29
SNF8-203ENST00000504000 FBXW4P57775 412 aa13.23□□□□□ -0.29
SNF8-203ENST00000504000 CLRN1P58418 232 aa13.23□□□□□ -0.29
SNF8-203ENST00000504000 RAB30Q15771 203 aa13.23□□□□□ -0.29
SNF8-203ENST00000504000 HIST3H3Q16695 136 aa13.23□□□□□ -0.29
SNF8-203ENST00000504000 AADACL3Q5VUY0 350 aa13.23□□□□□ -0.29
SNF8-203ENST00000504000 ZNF585AQ6P3V2 769 aa13.23□□□□□ -0.29
SNF8-203ENST00000504000 Q6ZS52 159 aa13.23□□□□□ -0.29
SNF8-203ENST00000504000 SKA3Q8IX90 412 aa13.23□□□□□ -0.29
SNF8-203ENST00000504000 POC1AQ8NBT0 407 aa13.23□□□□□ -0.29
SNF8-203ENST00000504000 OR8B12Q8NGG6 310 aa13.23□□□□□ -0.29
SNF8-203ENST00000504000 ZNF501Q96CX3 271 aaPredicted RBP13.23□□□□□ -0.29
SNF8-203ENST00000504000 EMC6Q9BV81 110 aa13.23□□□□□ -0.29
SNF8-203ENST00000504000 OR10A2Q9H208 303 aa13.23□□□□□ -0.29
SNF8-203ENST00000504000 GPR84Q9NQS5 396 aa13.23□□□□□ -0.29
SNF8-203ENST00000504000 ZFP57Q9NU63 452 aa13.23□□□□□ -0.29
SNF8-203ENST00000504000 KNL1Q8NG31 2342 aa13.23□□□□□ -0.29
SNF8-203ENST00000504000 IGLV3-1P01715 115 aa13.23□□□□□ -0.29
SNF8-203ENST00000504000 ATXN8OSP0DMR3 200 aa13.23□□□□□ -0.29
SNF8-203ENST00000504000 NAT2P11245 290 aa13.23□□□□□ -0.29
SNF8-203ENST00000504000 ABOP16442 354 aa13.23□□□□□ -0.29
SNF8-203ENST00000504000 PAX6P26367 422 aa13.23□□□□□ -0.29
SNF8-203ENST00000504000 NPY4RP50391 375 aa13.23□□□□□ -0.29
SNF8-203ENST00000504000 RAB13P51153 203 aa13.23□□□□□ -0.29
SNF8-203ENST00000504000 ZNF84P51523 738 aa13.23□□□□□ -0.29
SNF8-203ENST00000504000 GRB2P62993 217 aaKnown RBP13.23□□□□□ -0.29
SNF8-203ENST00000504000 CFHR1Q03591 330 aa13.23□□□□□ -0.29
SNF8-203ENST00000504000 ECH1Q13011 328 aa13.23□□□□□ -0.29
SNF8-203ENST00000504000 MYBPHQ13203 477 aa13.23□□□□□ -0.29
SNF8-203ENST00000504000 ABHD12BQ7Z5M8 362 aaPredicted RBP13.23□□□□□ -0.29
SNF8-203ENST00000504000 DMBX1Q8NFW5 382 aa13.23□□□□□ -0.29
SNF8-203ENST00000504000 CADM4Q8NFZ8 388 aa13.23□□□□□ -0.29
SNF8-203ENST00000504000 ACKR4Q9NPB9 350 aa13.23□□□□□ -0.29
SNF8-203ENST00000504000 PNRC2Q9NPJ4 139 aaKnown RBP13.23□□□□□ -0.29
SNF8-203ENST00000504000 RCC2Q9P258 522 aaKnown RBP13.23□□□□□ -0.29
SNF8-203ENST00000504000 B3GALT1Q9Y5Z6 326 aa13.23□□□□□ -0.29
SNF8-203ENST00000504000 SEC16AO15027 2179 aa13.22□□□□□ -0.29
SNF8-203ENST00000504000 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.22□□□□□ -0.29
SNF8-203ENST00000504000 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms