RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 JSRP1Q96MG2 331 aaPredicted RBP6.6□□□□□ -1.35
PDGFC-203ENST00000502773 PRRG4Q9BZD6 226 aa6.6□□□□□ -1.35
PDGFC-203ENST00000502773 MCTS1Q9ULC4 181 aaKnown RBP6.6□□□□□ -1.35
PDGFC-203ENST00000502773 CCDC187A0A096LP49 1063 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 A0A0U1RQV5 110 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 A0A1W2PQM1 296 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 TMEM82A0PJX8 343 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 PIN1P1O15428 100 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 TPOP07202 933 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 NDUFA6P56556 154 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 CFHR1Q03591 330 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 LRRC37A5PQ49AS3 106 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 C10orf128Q5T292 105 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 GABRG1Q8N1C3 465 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 NPRL2Q8WTW4 380 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 C14orf79Q96F83 325 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 HIST1H2AAQ96QV6 131 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 IGHV3-20A0A0C4DH32 117 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 SHISA3A0PJX4 238 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 DCDC2BA2VCK2 349 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 SLC6A9P48067 706 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 PTH2RP49190 550 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 AGFG1P52594 562 aaKnown RBP6.59□□□□□ -1.35
PDGFC-203ENST00000502773 ARF1P84077 181 aaKnown RBP6.59□□□□□ -1.35
PDGFC-203ENST00000502773 OC90Q02509 493 aaPredicted RBP6.59□□□□□ -1.35
PDGFC-203ENST00000502773 PLP2Q04941 152 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 ZFP36L1Q07352 338 aaKnown RBP6.59□□□□□ -1.35
PDGFC-203ENST00000502773 RBM39Q14498 530 aaKnown RBP6.59□□□□□ -1.35
PDGFC-203ENST00000502773 ZNF626Q68DY1 528 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.59□□□□□ -1.35
PDGFC-203ENST00000502773 INO80EQ8NBZ0 244 aaPredicted RBP6.59□□□□□ -1.35
PDGFC-203ENST00000502773 OR10K1Q8NGX5 313 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 CPT1CQ8TCG5 803 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 GPX8Q8TED1 209 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 FGGYQ96C11 551 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 MRPS24Q96EL2 167 aaKnown RBP6.59□□□□□ -1.35
PDGFC-203ENST00000502773 APMAPQ9HDC9 416 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 TAS2R4Q9NYW5 299 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 KLHL13Q9P2N7 655 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 C14orf166Q9Y224 244 aaKnown RBP6.59□□□□□ -1.35
PDGFC-203ENST00000502773 NOP16Q9Y3C1 178 aaKnown RBP6.59□□□□□ -1.35
PDGFC-203ENST00000502773 GOLT1BQ9Y3E0 138 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 TIMM10BQ9Y5J6 103 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 SERPINE3A8MV23 424 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 SERPINA5P05154 406 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 ITGA5P08648 1049 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 FAM157BP0CG42 384 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 LIFP15018 202 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 NFYAP23511 347 aaPredicted RBP6.59□□□□□ -1.35
PDGFC-203ENST00000502773 MPZP25189 248 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 KIR3DL2P43630 455 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 NKX6-1P78426 367 aaPredicted RBP6.59□□□□□ -1.35
PDGFC-203ENST00000502773 MALLQ13021 153 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 MFAP5Q13361 173 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 MRPL49Q13405 166 aaKnown RBP6.59□□□□□ -1.35
PDGFC-203ENST00000502773 INSL4Q14641 139 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 RAB35Q15286 201 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 CDNFQ49AH0 187 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 H3F3CQ6NXT2 135 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 BPIFB2Q8N4F0 458 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 OR10G3Q8NGC4 313 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 OR51A2Q8NGJ7 313 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 TMEM59Q9BXS4 323 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 CHST6Q9GZX3 395 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 TOLLIPQ9H0E2 274 aa6.59□□□□□ -1.35
PDGFC-203ENST00000502773 MRPS28Q9Y2Q9 187 aaKnown RBP6.59□□□□□ -1.35
PDGFC-203ENST00000502773 LOC390937A0A1W2PQ73 354 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 OR6C6A6NF89 314 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 F5H0A9 414 aaPredicted RBP6.58□□□□□ -1.36
PDGFC-203ENST00000502773 XRCC2O43543 280 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 WNT11O96014 354 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 SNRNP70P08621 437 aaKnown RBP6.58□□□□□ -1.36
PDGFC-203ENST00000502773 POU3F2P20265 443 aaPredicted RBP6.58□□□□□ -1.36
PDGFC-203ENST00000502773 SFTPDP35247 375 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 NUBP1P53384 320 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 ATP1B3P54709 279 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 MRPS34P82930 218 aaKnown RBP6.58□□□□□ -1.36
PDGFC-203ENST00000502773 PMPCAQ10713 525 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 PCOLCEQ15113 449 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 RIPPLY2Q5TAB7 128 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 ZNF385CQ66K41 422 aaPredicted RBP6.58□□□□□ -1.36
PDGFC-203ENST00000502773 AAED1Q7RTV5 226 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 TGIF2LXQ8IUE1 241 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 POC1BQ8TC44 478 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 SLAMF9Q96A28 289 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 FAM173AQ9BQD7 235 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 METTL9Q9H1A3 318 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 OR51M1Q9H341 326 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 MRPL22Q9NWU5 206 aaKnown RBP6.58□□□□□ -1.36
PDGFC-203ENST00000502773 KLRC4-KLRK1H3BQV0 150 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 P2RY10O00398 339 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 AGPAT2O15120 278 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 HMGB3O15347 200 aaKnown RBP6.58□□□□□ -1.36
PDGFC-203ENST00000502773 IFNA21P01568 189 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 CST2P09228 141 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 IGFBP3P17936 291 aaPredicted RBP6.58□□□□□ -1.36
PDGFC-203ENST00000502773 ANXA7P20073 488 aaKnown RBP6.58□□□□□ -1.36
PDGFC-203ENST00000502773 CNR1P21554 472 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 CD34P28906 385 aa6.58□□□□□ -1.36
PDGFC-203ENST00000502773 CX3CR1P49238 355 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms