RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 RHOXF1Q8NHV9 184 aa4.33□□□□□ -1.72
FXN-205ENST00000498653 HSD17B8Q92506 261 aa4.33□□□□□ -1.72
FXN-205ENST00000498653 NSMAFQ92636 917 aa4.33□□□□□ -1.72
FXN-205ENST00000498653 RFKQ969G6 155 aa4.33□□□□□ -1.72
FXN-205ENST00000498653 MCHR2Q969V1 340 aa4.33□□□□□ -1.72
FXN-205ENST00000498653 RADILQ96JH8 1075 aa4.33□□□□□ -1.72
FXN-205ENST00000498653 CNBD2Q96M20 576 aa4.33□□□□□ -1.72
FXN-205ENST00000498653 C18orf15Q96N68 181 aa4.33□□□□□ -1.72
FXN-205ENST00000498653 MRPL13Q9BYD1 178 aaKnown RBP4.33□□□□□ -1.72
FXN-205ENST00000498653 ANKRD60Q9BZ19 345 aa4.33□□□□□ -1.72
FXN-205ENST00000498653 SYT4Q9H2B2 425 aa4.33□□□□□ -1.72
FXN-205ENST00000498653 OR51V1Q9H2C8 321 aa4.33□□□□□ -1.72
FXN-205ENST00000498653 RERGLQ9H628 205 aa4.33□□□□□ -1.72
FXN-205ENST00000498653 MED20Q9H944 212 aa4.33□□□□□ -1.72
FXN-205ENST00000498653 MARCH7Q9H992 704 aa4.33□□□□□ -1.72
FXN-205ENST00000498653 GPR35Q9HC97 309 aa4.33□□□□□ -1.72
FXN-205ENST00000498653 HINT3Q9NQE9 182 aaKnown RBP4.33□□□□□ -1.72
FXN-205ENST00000498653 RPRD1BQ9NQG5 326 aaKnown RBP4.33□□□□□ -1.72
FXN-205ENST00000498653 TNFRSF19Q9NS68 423 aa4.33□□□□□ -1.72
FXN-205ENST00000498653 SLC7A10Q9NS82 523 aa4.33□□□□□ -1.72
FXN-205ENST00000498653 DNAJC27Q9NZQ0 273 aa4.33□□□□□ -1.72
FXN-205ENST00000498653 PRSS50Q9UI38 385 aa4.33□□□□□ -1.72
FXN-205ENST00000498653 POU2F3Q9UKI9 436 aa4.33□□□□□ -1.72
FXN-205ENST00000498653 PLA2G2DQ9UNK4 145 aa4.33□□□□□ -1.72
FXN-205ENST00000498653 B9D1Q9UPM9 204 aa4.33□□□□□ -1.72
FXN-205ENST00000498653 LRRC42Q9Y546 428 aa4.33□□□□□ -1.72
FXN-205ENST00000498653 IGLV1-36A0A0B4J1U3 117 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 A0A1W2PPL8 197 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 CIB4A0PJX0 185 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 LYNX1G3V0Z9 82 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 RPL36A-HNRNPH2H7BZ11 118 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 DENRO43583 198 aaKnown RBP4.32□□□□□ -1.72
FXN-205ENST00000498653 FAM20BO75063 409 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 ENTPD6O75354 484 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 GLCEO94923 617 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 MPZL1O95297 269 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 IGHV3-9P01782 118 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 HLA-DQA2P01906 255 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 GYPBP06028 91 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 LYNX1P0DP58 116 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 CTLA4P16410 223 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 SPI1P17947 270 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 GABRB1P18505 474 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 EDNRAP25101 427 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 LAP3P28838 519 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 MPGP29372 298 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 FMO3P31513 532 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 PYCR1P32322 319 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 VEGFCP49767 419 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 ZNF133P52736 654 aaPredicted RBP4.32□□□□□ -1.72
FXN-205ENST00000498653 BLVRAP53004 296 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 SH3BGRP55822 239 aaPredicted RBP4.32□□□□□ -1.72
FXN-205ENST00000498653 RPL15P61313 204 aaKnown RBP4.32□□□□□ -1.72
FXN-205ENST00000498653 ISL1P61371 349 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 CSNK2BP67870 215 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 ARF1P84077 181 aaKnown RBP4.32□□□□□ -1.72
FXN-205ENST00000498653 ROR2Q01974 943 aaKnown RBP4.32□□□□□ -1.72
FXN-205ENST00000498653 FMODQ06828 376 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 TMED1Q13445 227 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 MED21Q13503 144 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 APOFQ13790 326 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 STK11Q15831 433 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 SGCAQ16586 387 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 HIST3H3Q16695 136 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 C21orf62-AS1Q17RA5 79 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 CEACAM16Q2WEN9 425 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 ARMCX4Q5H9R4 360 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 SLC35D3Q5M8T2 416 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 PHYHD1Q5SRE7 291 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 C10orf128Q5T292 105 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 LCN1P1Q5VSP4 162 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 AADACL4Q5VUY2 407 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 SLC22A25Q6T423 547 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 TFAP2EQ6VUC0 442 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 Q6ZT83 130 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 BCDIN3DQ7Z5W3 292 aaKnown RBP4.32□□□□□ -1.72
FXN-205ENST00000498653 ZBTB46Q86UZ6 589 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 GLB1L2Q8IW92 636 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 OR6V1Q8N148 313 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 LINC00482Q8N8I6 264 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 C11orf44Q8N8P7 122 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 BBS1Q8NFJ9 593 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 OR6K6Q8NGW6 343 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 CNIH3Q8TBE1 160 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 PTP4A1Q93096 173 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 NMD3Q96D46 503 aaKnown RBP4.32□□□□□ -1.72
FXN-205ENST00000498653 FBXO17Q96EF6 278 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 ZNF582Q96NG8 517 aaPredicted RBP4.32□□□□□ -1.72
FXN-205ENST00000498653 TSSK2Q96PF2 358 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 ALKBH3Q96Q83 286 aaPredicted RBP4.32□□□□□ -1.72
FXN-205ENST00000498653 DDOQ99489 341 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 TEAD3Q99594 435 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 VRK1Q99986 396 aaPredicted RBP4.32□□□□□ -1.72
FXN-205ENST00000498653 HCAR1Q9BXC0 346 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 NMNAT2Q9BZQ4 307 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 NUAK2Q9H093 628 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 PRDM13Q9H4Q3 707 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 C16orf95Q9H693 158 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 SEC61A2Q9H9S3 476 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 CRLF2Q9HC73 371 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms