RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 MSX2P35548 267 aaPredicted RBP9.49□□□□□ -0.89
CDK9-205ENST00000498339 GSK3BP49841 420 aa9.49□□□□□ -0.89
CDK9-205ENST00000498339 RPS6KA3P51812 740 aa9.49□□□□□ -0.89
CDK9-205ENST00000498339 CSNK2BP67870 215 aa9.49□□□□□ -0.89
CDK9-205ENST00000498339 SLC35A2P78381 396 aa9.49□□□□□ -0.89
CDK9-205ENST00000498339 CYLC2Q14093 348 aaPredicted RBP9.49□□□□□ -0.89
CDK9-205ENST00000498339 RSPO1Q2MKA7 263 aaPredicted RBP9.49□□□□□ -0.89
CDK9-205ENST00000498339 RFX4Q33E94 735 aa9.49□□□□□ -0.89
CDK9-205ENST00000498339 SLC36A3Q495N2 470 aa9.49□□□□□ -0.89
CDK9-205ENST00000498339 GLYATL3Q5SZD4 288 aa9.49□□□□□ -0.89
CDK9-205ENST00000498339 TBPL2Q6SJ96 375 aa9.49□□□□□ -0.89
CDK9-205ENST00000498339 LIAT1Q6ZQX7 453 aa9.49□□□□□ -0.89
CDK9-205ENST00000498339 MBOAT2Q6ZWT7 520 aa9.49□□□□□ -0.89
CDK9-205ENST00000498339 DPY19L4Q7Z388 723 aa9.49□□□□□ -0.89
CDK9-205ENST00000498339 RNF113BQ8IZP6 322 aaKnown RBP9.49□□□□□ -0.89
CDK9-205ENST00000498339 FAM156AQ8NDB6 213 aa9.49□□□□□ -0.89
CDK9-205ENST00000498339 OR5T2Q8NGG2 359 aa9.49□□□□□ -0.89
CDK9-205ENST00000498339 OR56B2PQ8NGI1 322 aa9.49□□□□□ -0.89
CDK9-205ENST00000498339 OR9Q1Q8NGQ5 310 aa9.49□□□□□ -0.89
CDK9-205ENST00000498339 TNFRSF14Q92956 283 aa9.49□□□□□ -0.89
CDK9-205ENST00000498339 SEH1LQ96EE3 360 aa9.49□□□□□ -0.89
CDK9-205ENST00000498339 DMRTB1Q96MA1 342 aa9.49□□□□□ -0.89
CDK9-205ENST00000498339 TMEM120AQ9BXJ8 343 aa9.49□□□□□ -0.89
CDK9-205ENST00000498339 ZNF702PQ9H963 129 aa9.49□□□□□ -0.89
CDK9-205ENST00000498339 SRA1Q9HD15 236 aaKnown RBP9.49□□□□□ -0.89
CDK9-205ENST00000498339 ADA2Q9NZK5 511 aa9.49□□□□□ -0.89
CDK9-205ENST00000498339 TMEM5Q9Y2B1 443 aa9.49□□□□□ -0.89
CDK9-205ENST00000498339 TENM3Q9P273 2699 aa9.49□□□□□ -0.89
CDK9-205ENST00000498339 M0R1W7 72 aa9.48□□□□□ -0.89
CDK9-205ENST00000498339 DCTN6O00399 190 aa9.48□□□□□ -0.89
CDK9-205ENST00000498339 PPP1R3DO95685 299 aa9.48□□□□□ -0.89
CDK9-205ENST00000498339 RENP00797 406 aa9.48□□□□□ -0.89
CDK9-205ENST00000498339 LHBP01229 141 aa9.48□□□□□ -0.89
CDK9-205ENST00000498339 PAICSP22234 425 aaKnown RBP9.48□□□□□ -0.89
CDK9-205ENST00000498339 NAA10P41227 235 aaPredicted RBP9.48□□□□□ -0.89
CDK9-205ENST00000498339 CDKN2AP42771 156 aaKnown RBP9.48□□□□□ -0.89
CDK9-205ENST00000498339 KRTAP27-1Q3LI81 207 aa9.48□□□□□ -0.89
CDK9-205ENST00000498339 PLA1AQ53H76 456 aa9.48□□□□□ -0.89
CDK9-205ENST00000498339 NANOGP8Q6NSW7 305 aa9.48□□□□□ -0.89
CDK9-205ENST00000498339 TMPRSS11FQ6ZWK6 438 aa9.48□□□□□ -0.89
CDK9-205ENST00000498339 TSEN54Q7Z6J9 526 aaKnown RBP9.48□□□□□ -0.89
CDK9-205ENST00000498339 SLC26A10Q8NG04 563 aa9.48□□□□□ -0.89
CDK9-205ENST00000498339 C8orf46Q8TAG6 207 aa9.48□□□□□ -0.89
CDK9-205ENST00000498339 DPF1Q92782 380 aa9.48□□□□□ -0.89
CDK9-205ENST00000498339 DUS3LQ96G46 650 aaKnown RBP9.48□□□□□ -0.89
CDK9-205ENST00000498339 RNPEPL1Q9HAU8 725 aa9.48□□□□□ -0.89
CDK9-205ENST00000498339 NRIP3Q9NQ35 241 aa9.48□□□□□ -0.89
CDK9-205ENST00000498339 SNTG1Q9NSN8 517 aa9.48□□□□□ -0.89
CDK9-205ENST00000498339 SERTAD4Q9NUC0 356 aa9.48□□□□□ -0.89
CDK9-205ENST00000498339 SLC25A10Q9UBX3 287 aaPredicted RBP9.48□□□□□ -0.89
CDK9-205ENST00000498339 ZNF391Q9UJN7 358 aa9.48□□□□□ -0.89
CDK9-205ENST00000498339 SNX13Q9Y5W8 968 aa9.48□□□□□ -0.89
CDK9-205ENST00000498339 EPPK1P58107 5090 aaKnown RBP9.48□□□□□ -0.89
CDK9-205ENST00000498339 BIRC6Q9NR09 4857 aa9.47□□□□□ -0.89
CDK9-205ENST00000498339 TRBV23-1A0A0A0MS06 115 aa9.47□□□□□ -0.89
CDK9-205ENST00000498339 IGLV1-36A0A0B4J1U3 117 aa9.47□□□□□ -0.89
CDK9-205ENST00000498339 ADARB2-AS1A8MUL3 147 aa9.47□□□□□ -0.89
CDK9-205ENST00000498339 FAHP16930 419 aa9.47□□□□□ -0.89
CDK9-205ENST00000498339 KDELR2P33947 212 aa9.47□□□□□ -0.89
CDK9-205ENST00000498339 GNALP38405 381 aa9.47□□□□□ -0.89
CDK9-205ENST00000498339 SLC7A2P52569 658 aa9.47□□□□□ -0.89
CDK9-205ENST00000498339 LGALS4P56470 323 aa9.47□□□□□ -0.89
CDK9-205ENST00000498339 SELENOWP63302 87 aa9.47□□□□□ -0.89
CDK9-205ENST00000498339 STUMQ69YW2 141 aa9.47□□□□□ -0.89
CDK9-205ENST00000498339 VTCN1Q7Z7D3 282 aa9.47□□□□□ -0.89
CDK9-205ENST00000498339 CPLX4Q7Z7G2 160 aa9.47□□□□□ -0.89
CDK9-205ENST00000498339 FAM185AQ8N0U4 392 aa9.47□□□□□ -0.89
CDK9-205ENST00000498339 OR6V1Q8N148 313 aa9.47□□□□□ -0.89
CDK9-205ENST00000498339 OR5D13Q8NGL4 314 aa9.47□□□□□ -0.89
CDK9-205ENST00000498339 C12orf43Q96C57 262 aaKnown RBP9.47□□□□□ -0.89
CDK9-205ENST00000498339 RSRC1Q96IZ7 334 aaKnown RBP9.47□□□□□ -0.89
CDK9-205ENST00000498339 ERMAPQ96PL5 475 aaPredicted RBP9.47□□□□□ -0.89
CDK9-205ENST00000498339 GPX7Q96SL4 187 aaPredicted RBP9.47□□□□□ -0.89
CDK9-205ENST00000498339 B9D2Q9BPU9 175 aa9.47□□□□□ -0.89
CDK9-205ENST00000498339 COPS4Q9BT78 406 aa9.47□□□□□ -0.89
CDK9-205ENST00000498339 ELL3Q9HB65 397 aaPredicted RBP9.47□□□□□ -0.89
CDK9-205ENST00000498339 RPRD1BQ9NQG5 326 aaKnown RBP9.47□□□□□ -0.89
CDK9-205ENST00000498339 B9D1Q9UPM9 204 aa9.47□□□□□ -0.89
CDK9-205ENST00000498339 FAM220BPB1ANY3 271 aa9.46□□□□□ -0.9
CDK9-205ENST00000498339 FFAR1O14842 300 aa9.46□□□□□ -0.9
CDK9-205ENST00000498339 TBX1O43435 398 aa9.46□□□□□ -0.9
CDK9-205ENST00000498339 ZNF682O95780 498 aa9.46□□□□□ -0.9
CDK9-205ENST00000498339 TFF1P04155 84 aa9.46□□□□□ -0.9
CDK9-205ENST00000498339 SLC2A1P11166 492 aa9.46□□□□□ -0.9
CDK9-205ENST00000498339 ZNF823P16415 610 aa9.46□□□□□ -0.9
CDK9-205ENST00000498339 HOXD3P31249 432 aaPredicted RBP9.46□□□□□ -0.9
CDK9-205ENST00000498339 VDAC2P45880 294 aaPredicted RBP9.46□□□□□ -0.9
CDK9-205ENST00000498339 TAF13Q15543 124 aa9.46□□□□□ -0.9
CDK9-205ENST00000498339 AANATQ16613 207 aa9.46□□□□□ -0.9
CDK9-205ENST00000498339 FGD3Q5JSP0 725 aa9.46□□□□□ -0.9
CDK9-205ENST00000498339 KHDC1LQ5JSQ8 128 aa9.46□□□□□ -0.9
CDK9-205ENST00000498339 CRIP3Q6Q6R5 217 aa9.46□□□□□ -0.9
CDK9-205ENST00000498339 WDR82Q6UXN9 313 aa9.46□□□□□ -0.9
CDK9-205ENST00000498339 DPY19L2P2Q6ZN68 376 aa9.46□□□□□ -0.9
CDK9-205ENST00000498339 WDR86Q86TI4 376 aa9.46□□□□□ -0.9
CDK9-205ENST00000498339 CYP4Z1Q86W10 505 aa9.46□□□□□ -0.9
CDK9-205ENST00000498339 TMEM219Q86XT9 240 aa9.46□□□□□ -0.9
CDK9-205ENST00000498339 PAPD5Q8NDF8 572 aaKnown RBP9.46□□□□□ -0.9
CDK9-205ENST00000498339 OR2T12Q8NG77 320 aa9.46□□□□□ -0.9
CDK9-205ENST00000498339 OR1M1Q8NGA1 313 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms