RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 RBMY1DP0C7P1 496 aaKnown RBP4.81□□□□□ -1.64
BRCA1-224ENST00000497488 RBMY1A1P0DJD3 496 aaKnown RBP4.81□□□□□ -1.64
BRCA1-224ENST00000497488 IGHV1-2P23083 117 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 KIR2DS4P43632 304 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 RAB7AP51149 207 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 OR10A3P58181 314 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 RPL32P62910 135 aaKnown RBP4.81□□□□□ -1.64
BRCA1-224ENST00000497488 HMGCS1Q01581 520 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 TWF1Q12792 350 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 GUSBP1Q15486 140 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 SNCBQ16143 134 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 TMEM249Q2WGJ8 235 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 ACTBL2Q562R1 376 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 GDPD4Q6W3E5 623 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 USP50Q70EL3 339 aaPredicted RBP4.81□□□□□ -1.64
BRCA1-224ENST00000497488 ZNF771Q7L3S4 317 aaPredicted RBP4.81□□□□□ -1.64
BRCA1-224ENST00000497488 PRSS41Q7RTY9 318 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 C17orf82Q86X59 251 aaPredicted RBP4.81□□□□□ -1.64
BRCA1-224ENST00000497488 PRIMA1Q86XR5 153 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 NAXDQ8IW45 347 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 FBXO16Q8IX29 292 aaPredicted RBP4.81□□□□□ -1.64
BRCA1-224ENST00000497488 SKA3Q8IX90 412 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 KIR2DL5AQ8N109 375 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 CCDC112Q8NEF3 446 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 KIR2DL5BQ8NHK3 375 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 MRGPRDQ8TDS7 321 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 DOK4Q8TEW6 326 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 YIPF6Q96EC8 236 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 ZNF488Q96MN9 340 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 ACOT13Q9NPJ3 140 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 TAS2R9Q9NYW1 312 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 ZNF107Q9UII5 783 aaPredicted RBP4.81□□□□□ -1.64
BRCA1-224ENST00000497488 CES1P1Q9UKY3 287 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 OR51B2Q9Y5P1 312 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 PSME4Q14997 1843 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 COL1A1P02452 1464 aaPredicted RBP4.81□□□□□ -1.64
BRCA1-224ENST00000497488 FER1L5A0AVI2 2057 aa4.81□□□□□ -1.64
BRCA1-224ENST00000497488 ANKRD65E5RJM6 399 aa4.8□□□□□ -1.64
BRCA1-224ENST00000497488 J3QLI3 93 aa4.8□□□□□ -1.64
BRCA1-224ENST00000497488 SLC16A4O15374 487 aa4.8□□□□□ -1.64
BRCA1-224ENST00000497488 HCRTR1O43613 425 aa4.8□□□□□ -1.64
BRCA1-224ENST00000497488 SHOX2O60902 331 aaPredicted RBP4.8□□□□□ -1.64
BRCA1-224ENST00000497488 VDAC1P21796 283 aa4.8□□□□□ -1.64
BRCA1-224ENST00000497488 USF1P22415 310 aaPredicted RBP4.8□□□□□ -1.64
BRCA1-224ENST00000497488 RPS12P25398 132 aaKnown RBP4.8□□□□□ -1.64
BRCA1-224ENST00000497488 ARL2P36404 184 aa4.8□□□□□ -1.64
BRCA1-224ENST00000497488 KLK7P49862 253 aa4.8□□□□□ -1.64
BRCA1-224ENST00000497488 UBE2E1P51965 193 aa4.8□□□□□ -1.64
BRCA1-224ENST00000497488 NKX2-5P52952 324 aaPredicted RBP4.8□□□□□ -1.64
BRCA1-224ENST00000497488 NUP107P57740 925 aa4.8□□□□□ -1.64
BRCA1-224ENST00000497488 GLO1Q04760 184 aa4.8□□□□□ -1.64
BRCA1-224ENST00000497488 STX4Q12846 297 aa4.8□□□□□ -1.64
BRCA1-224ENST00000497488 CAPRIN1Q14444 709 aaKnown RBP4.8□□□□□ -1.64
BRCA1-224ENST00000497488 TMEM30BQ3MIR4 351 aa4.8□□□□□ -1.64
BRCA1-224ENST00000497488 OR10J3Q5JRS4 329 aa4.8□□□□□ -1.64
BRCA1-224ENST00000497488 FAM27D1Q5T7N8 215 aa4.8□□□□□ -1.64
BRCA1-224ENST00000497488 RUSC1-AS1Q66K80 236 aa4.8□□□□□ -1.64
BRCA1-224ENST00000497488 OR5M10Q6IEU7 315 aa4.8□□□□□ -1.64
BRCA1-224ENST00000497488 CNIH2Q6PI25 160 aa4.8□□□□□ -1.64
BRCA1-224ENST00000497488 DRAM2Q6UX65 266 aa4.8□□□□□ -1.64
BRCA1-224ENST00000497488 ZNF571Q7Z3V5 609 aaPredicted RBP4.8□□□□□ -1.64
BRCA1-224ENST00000497488 HIPK1Q86Z02 1210 aa4.8□□□□□ -1.64
BRCA1-224ENST00000497488 BBS7Q8IWZ6 715 aa4.8□□□□□ -1.64
BRCA1-224ENST00000497488 C6orf223Q8N319 242 aa4.8□□□□□ -1.64
BRCA1-224ENST00000497488 AQP11Q8NBQ7 271 aa4.8□□□□□ -1.64
BRCA1-224ENST00000497488 C19orf18Q8NEA5 215 aa4.8□□□□□ -1.64
BRCA1-224ENST00000497488 OR8K1Q8NGG5 319 aa4.8□□□□□ -1.64
BRCA1-224ENST00000497488 DYNC2LI1Q8TCX1 351 aa4.8□□□□□ -1.64
BRCA1-224ENST00000497488 APH1BQ8WW43 257 aa4.8□□□□□ -1.64
BRCA1-224ENST00000497488 TMEM234Q8WY98 164 aa4.8□□□□□ -1.64
BRCA1-224ENST00000497488 GMPPAQ96IJ6 420 aaPredicted RBP4.8□□□□□ -1.64
BRCA1-224ENST00000497488 UBE2E2Q96LR5 201 aa4.8□□□□□ -1.64
BRCA1-224ENST00000497488 RANBP9Q96S59 729 aa4.8□□□□□ -1.64
BRCA1-224ENST00000497488 ATF6BQ99941 703 aa4.8□□□□□ -1.64
BRCA1-224ENST00000497488 COA1Q9GZY4 146 aa4.8□□□□□ -1.64
BRCA1-224ENST00000497488 C20orf85Q9H1P6 137 aa4.8□□□□□ -1.64
BRCA1-224ENST00000497488 ZDHHC4Q9NPG8 344 aa4.8□□□□□ -1.64
BRCA1-224ENST00000497488 IMPAD1Q9NX62 359 aa4.8□□□□□ -1.64
BRCA1-224ENST00000497488 ASF1AQ9Y294 204 aa4.8□□□□□ -1.64
BRCA1-224ENST00000497488 STYXL1Q9Y6J8 313 aa4.8□□□□□ -1.64
BRCA1-224ENST00000497488 A6NIZ1 184 aa4.79□□□□□ -1.64
BRCA1-224ENST00000497488 CDIPTO14735 213 aa4.79□□□□□ -1.64
BRCA1-224ENST00000497488 FGF16O43320 207 aa4.79□□□□□ -1.64
BRCA1-224ENST00000497488 MPZL2O60487 215 aa4.79□□□□□ -1.64
BRCA1-224ENST00000497488 IFNA5P01569 189 aa4.79□□□□□ -1.64
BRCA1-224ENST00000497488 RPSAP08865 295 aaKnown RBP4.79□□□□□ -1.64
BRCA1-224ENST00000497488 HSPD1P10809 573 aaKnown RBP4.79□□□□□ -1.64
BRCA1-224ENST00000497488 LAMP1P11279 417 aa4.79□□□□□ -1.64
BRCA1-224ENST00000497488 ZNF35P13682 527 aa4.79□□□□□ -1.64
BRCA1-224ENST00000497488 IGLL1P15814 213 aa4.79□□□□□ -1.64
BRCA1-224ENST00000497488 CMA1P23946 247 aa4.79□□□□□ -1.64
BRCA1-224ENST00000497488 ADORA1P30542 326 aa4.79□□□□□ -1.64
BRCA1-224ENST00000497488 ZNF121P58317 390 aaPredicted RBP4.79□□□□□ -1.64
BRCA1-224ENST00000497488 LINC01547P58512 204 aaPredicted RBP4.79□□□□□ -1.64
BRCA1-224ENST00000497488 RAP1BP61224 184 aa4.79□□□□□ -1.64
BRCA1-224ENST00000497488 MRPS25P82663 173 aaKnown RBP4.79□□□□□ -1.64
BRCA1-224ENST00000497488 RPL18AQ02543 176 aaKnown RBP4.79□□□□□ -1.64
BRCA1-224ENST00000497488 CLINT1Q14677 625 aa4.79□□□□□ -1.64
BRCA1-224ENST00000497488 SLC1A5Q15758 541 aa4.79□□□□□ -1.64
BRCA1-224ENST00000497488 ADAMTSL4-AS1Q5T5F5 129 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms