RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 NEURL4Q96JN8 1562 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 ADGRA3Q8IWK6 1321 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 IGLV1-36A0A0B4J1U3 117 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 LOC100653049A0A140TA62 436 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 LINC00854A0A1B0GVQ3 168 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 A6NDN8 102 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 SLC22A20A6NK97 555 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 CENPXA8MT69 81 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 ERI3O43414 337 aaKnown RBP1.26□□□□□ -2.21
VPS26A-208ENST00000497022 XRCC2O43543 280 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 KRT34O76011 436 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 TDP2O95551 362 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 HPRT1P00492 218 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 OXTP01178 125 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 IVLP07476 585 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 TACSTD2P09758 323 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 ZNF806P0C7X5 589 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 CSNK2A2P19784 350 aaPredicted RBP1.26□□□□□ -2.21
VPS26A-208ENST00000497022 RAB3BP20337 219 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 PTNP21246 168 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 CASQ1P31415 396 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 FABP6P51161 128 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 ATP6V0D1P61421 351 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 PRR3P79522 188 aaKnown RBP1.26□□□□□ -2.21
VPS26A-208ENST00000497022 CDH17Q12864 832 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 QPRTQ15274 297 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 TSC22D1Q15714 1073 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 ZNF829Q3KNS6 432 aaPredicted RBP1.26□□□□□ -2.21
VPS26A-208ENST00000497022 FBXO48Q5FWF7 155 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 THEM4Q5T1C6 240 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 ADNP2Q6IQ32 1131 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 SLC25A25Q6KCM7 469 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 ASCL4Q6XD76 172 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 LINC00336Q6ZUF6 198 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 SLC35D2Q76EJ3 337 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 HORMAD1Q86X24 394 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 PRSS58Q8IYP2 241 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 VKORC1L1Q8N0U8 176 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 FAM58AQ8N1B3 248 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 ST20-AS1Q8NBB2 130 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 FBXO36Q8NEA4 188 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 OR52E2Q8NGJ4 325 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 OR51L1Q8NGJ5 315 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 OR13C9Q8NGT0 318 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 OR51F2Q8NH61 342 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 LILRB4Q8NHJ6 448 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 ISOC2Q96AB3 205 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 FLYWCH2Q96CP2 140 aaKnown RBP1.26□□□□□ -2.21
VPS26A-208ENST00000497022 LRRC39Q96DD0 335 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 SEH1LQ96EE3 360 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 C19orf60Q96EN9 201 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 GALNT14Q96FL9 552 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 SIKE1Q9BRV8 207 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 STMN4Q9H169 189 aaPredicted RBP1.26□□□□□ -2.21
VPS26A-208ENST00000497022 GAL3ST2Q9H3Q3 398 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 MRM3Q9HC36 420 aaKnown RBP1.26□□□□□ -2.21
VPS26A-208ENST00000497022 CD209Q9NNX6 404 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 FBXO6Q9NRD1 293 aaPredicted RBP1.26□□□□□ -2.21
VPS26A-208ENST00000497022 MCUBQ9NWR8 336 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 SLC39A1Q9NY26 324 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 IFNKQ9P0W0 207 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 DDX19BQ9UMR2 479 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 KPTNQ9Y664 436 aa1.26□□□□□ -2.21
VPS26A-208ENST00000497022 BZW2Q9Y6E2 419 aaKnown RBP1.26□□□□□ -2.21
VPS26A-208ENST00000497022 GSTTP1A0A1W2PQM5 241 aa1.25□□□□□ -2.21
VPS26A-208ENST00000497022 GABRPO00591 440 aa1.25□□□□□ -2.21
VPS26A-208ENST00000497022 NME4O00746 187 aa1.25□□□□□ -2.21
VPS26A-208ENST00000497022 NEMFO60524 1076 aa1.25□□□□□ -2.21
VPS26A-208ENST00000497022 SLC19A2O60779 497 aa1.25□□□□□ -2.21
VPS26A-208ENST00000497022 MPDU1O75352 247 aa1.25□□□□□ -2.21
VPS26A-208ENST00000497022 RDH16O75452 317 aa1.25□□□□□ -2.21
VPS26A-208ENST00000497022 ETHE1O95571 254 aa1.25□□□□□ -2.21
VPS26A-208ENST00000497022 KLK1P06870 262 aa1.25□□□□□ -2.21
VPS26A-208ENST00000497022 CCDC172P0C7W6 258 aa1.25□□□□□ -2.21
VPS26A-208ENST00000497022 HOXB8P17481 243 aaPredicted RBP1.25□□□□□ -2.21
VPS26A-208ENST00000497022 ATF6P18850 670 aa1.25□□□□□ -2.21
VPS26A-208ENST00000497022 USF1P22415 310 aaPredicted RBP1.25□□□□□ -2.21
VPS26A-208ENST00000497022 WARSP23381 471 aaKnown RBP1.25□□□□□ -2.21
VPS26A-208ENST00000497022 CEACAM3P40198 252 aa1.25□□□□□ -2.21
VPS26A-208ENST00000497022 SERPINB8P50452 374 aa1.25□□□□□ -2.21
VPS26A-208ENST00000497022 RAB7AP51149 207 aa1.25□□□□□ -2.21
VPS26A-208ENST00000497022 CLDN6P56747 220 aa1.25□□□□□ -2.21
VPS26A-208ENST00000497022 ZNF121P58317 390 aaPredicted RBP1.25□□□□□ -2.21
VPS26A-208ENST00000497022 PPP1CBP62140 327 aa1.25□□□□□ -2.21
VPS26A-208ENST00000497022 SEMG2Q02383 582 aa1.25□□□□□ -2.21
VPS26A-208ENST00000497022 SNRNP35Q16560 246 aaKnown RBP1.25□□□□□ -2.21
VPS26A-208ENST00000497022 TPRG1LQ5T0D9 272 aa1.25□□□□□ -2.21
VPS26A-208ENST00000497022 LIN9Q5TKA1 542 aa1.25□□□□□ -2.21
VPS26A-208ENST00000497022 AP1ARQ63HQ0 302 aa1.25□□□□□ -2.21
VPS26A-208ENST00000497022 C16orf87Q6PH81 154 aa1.25□□□□□ -2.21
VPS26A-208ENST00000497022 WDR82Q6UXN9 313 aa1.25□□□□□ -2.21
VPS26A-208ENST00000497022 NPSR1Q6W5P4 371 aa1.25□□□□□ -2.21
VPS26A-208ENST00000497022 C12orf54Q6X4T0 127 aa1.25□□□□□ -2.21
VPS26A-208ENST00000497022 MRPL55Q7Z7F7 128 aaKnown RBP1.25□□□□□ -2.21
VPS26A-208ENST00000497022 UNC93AQ86WB7 457 aa1.25□□□□□ -2.21
VPS26A-208ENST00000497022 FAM71AQ8IYT1 594 aa1.25□□□□□ -2.21
VPS26A-208ENST00000497022 ARHGAP18Q8N392 663 aa1.25□□□□□ -2.21
VPS26A-208ENST00000497022 CBR4Q8N4T8 237 aa1.25□□□□□ -2.21
VPS26A-208ENST00000497022 CSGALNACT2Q8N6G5 542 aa1.25□□□□□ -2.21
VPS26A-208ENST00000497022 ASCC1Q8N9N2 400 aaKnown RBP1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms