RNA–Protein interactions for RNA: ENST00000496826.1

USF3-204, Transcript of upstream transcription factor family member 3, humanhuman

TSL 1 (best)

Gene USF3, Length 8,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-204ENST00000496826 SLC25A32Q9H2D1 315 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 TP63Q9H3D4 680 aaPredicted RBP5.33□□□□□ -1.56
USF3-204ENST00000496826 TUBA4BQ9H853 241 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 AUP1Q9Y679 476 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 V9GY05 133 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 C21orf140B9A014 251 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 M0R082 166 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 MASP2O00187 686 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 PRF1P14222 555 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 TNFRSF4P43489 277 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 WNT3AP56704 352 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 SRSF1Q07955 248 aaKnown RBP eCLIP5.33□□□□□ -1.56
USF3-204ENST00000496826 LINC01559Q495D7 138 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 SFRP4Q6FHJ7 346 aaPredicted RBP5.33□□□□□ -1.56
USF3-204ENST00000496826 USP17L6PQ6QN14 398 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 TCF24Q7RTU0 167 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 UBAC2Q8NBM4 344 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 LHX4Q969G2 390 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 PRR11Q96HE9 360 aaPredicted RBP5.33□□□□□ -1.56
USF3-204ENST00000496826 MS4A4EQ96PG1 132 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 ADAMTS10Q9H324 1103 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 ZDHHC18Q9NUE0 388 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 CLN8Q9UBY8 286 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 ASCC3Q8N3C0 2202 aaKnown RBP5.33□□□□□ -1.56
USF3-204ENST00000496826 FITM1A5D6W6 292 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 GPX1P07203 203 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 FAM163BP0C2L3 166 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 MAGEA5P43359 124 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 CCR6P51684 374 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 SNU13P55769 128 aaKnown RBP5.33□□□□□ -1.56
USF3-204ENST00000496826 CLDN20P56880 219 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 CYBRD1Q53TN4 286 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 DBF4BQ8NFT6 615 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 CRB3Q9BUF7 120 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 ANGPTL4Q9BY76 406 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 AICDAQ9GZX7 198 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 CBLN4Q9NTU7 201 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 UQCC1Q9NVA1 299 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 KLK11Q9UBX7 282 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 KCNK6Q9Y257 313 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 SCN3AQ9NY46 2000 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 PLB1Q6P1J6 1458 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 ZNF735P0CB33 412 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 CBR1P16152 277 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 HOXD13P35453 343 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 FUT6P51993 359 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 RAC3P60763 192 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 SPHARQ15513 63 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 HYAL4Q2M3T9 481 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 TBPL2Q6SJ96 375 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 APCDD1Q8J025 514 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 FAM103A1Q9BTL3 118 aaKnown RBP5.33□□□□□ -1.56
USF3-204ENST00000496826 LRRC61Q9BV99 259 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 TOLLIPQ9H0E2 274 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 POPDC3Q9HBV1 291 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 IGSF5Q9NSI5 407 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 ATP23Q9Y6H3 246 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 MYH13Q9UKX3 1938 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 hCG_2039718K7EN88 272 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 CCSO14618 274 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 PLAUP00749 431 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 GP1BAP07359 652 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 OR4A8P0C604 315 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 SMIM18P0DKX4 95 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 CORO1AP31146 461 aaKnown RBP5.33□□□□□ -1.56
USF3-204ENST00000496826 IHHQ14623 411 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 PELI3Q8N2H9 469 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 KRTCAP2Q8N6L1 136 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 UBE2E2Q96LR5 201 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 LTB4R2Q9NPC1 389 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 RNF186Q9NXI6 227 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 HSF4Q9ULV5 492 aa5.33□□□□□ -1.56
USF3-204ENST00000496826 FBLL1A6NHQ2 334 aaKnown RBP5.32□□□□□ -1.56
USF3-204ENST00000496826 MFNGO00587 321 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 RER1O15258 196 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 MT-ATP6P00846 226 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 MAS1LP35410 378 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 ASAH1Q13510 395 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 AMIGO2Q86SJ2 522 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 OR10Z1Q8NGY1 313 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 OR6X1Q8NH79 312 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 SH2D3AQ9BRG2 576 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 CHAC1Q9BUX1 264 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 SH2D2AQ9NP31 389 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 LANCL2Q9NS86 450 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 OR4C46A6NHA9 309 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 LALBAP00709 142 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 SELPP16109 830 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 ZBTB25P24278 435 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 SLC6A1P30531 599 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 SSR4P51571 173 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 CDC20Q12834 499 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 KIR2DS3Q14952 304 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 LRRC75BQ2VPJ9 315 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 KMT5CQ86Y97 462 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 NAXDQ8IW45 347 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 HIST1H4GQ99525 98 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 RPRMQ9NS64 109 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 HRASLS2Q9NWW9 162 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 FBXL2Q9UKC9 423 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms