RNA–Protein interactions for RNA: ENST00000496818.2

CACNA1C-229, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-229ENST00000496818 RAB36O95755 333 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 CHRM4P08173 479 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 TACSTD2P09758 323 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 DUX4L2P0CJ85 424 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 DUX4L3P0CJ86 424 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 DUX4L4P0CJ87 422 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 DUX4L5P0CJ88 424 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 DUX4L6P0CJ89 424 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 DUX4L7P0CJ90 424 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 HSMCR30P0CW71 290 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 OR12D1P0DN82 309 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 SAGP10523 405 aaPredicted RBP4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 NPR2P20594 1047 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 CXCR1P25024 350 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 GIFP27352 417 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 TALDO1P37837 337 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 SLC9A3P48764 834 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 FOXG1P55316 489 aaPredicted RBP4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 RPS23P62266 143 aaKnown RBP4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 H3F3AP84243 136 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 CDK5Q00535 292 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 GALK2Q01415 458 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 NHLH2Q02577 135 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 CD300CQ08708 224 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 FUT5Q11128 374 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 RAB40BQ12829 278 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 MRPL28Q13084 256 aaKnown RBP4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 SNTB2Q13425 540 aaKnown RBP4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 ICAM4Q14773 271 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 MAPK14Q16539 360 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 SYPL1Q16563 259 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 CCDC58Q4VC31 144 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 KLHL22Q53GT1 634 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 MRPL2Q5T653 305 aaKnown RBP4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 TMEM225Q6GV28 225 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 NIPAL3Q6P499 406 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 FAM122CQ6P4D5 195 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 MZT2AQ6P582 158 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 ANKRD16Q6P6B7 361 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 ADGRG3Q86Y34 549 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 C3orf56Q8N813 242 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 C19orf18Q8NEA5 215 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 OR4K5Q8NGD3 323 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 OR4D11Q8NGI4 311 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 OR51F2Q8NH61 342 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 SGMS2Q8NHU3 365 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 VANGL1Q8TAA9 524 aaPredicted RBP4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 LHFPL5Q8TAF8 219 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 SLC7A13Q8TCU3 470 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 GNPDA2Q8TDQ7 276 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 SLC25A46Q96AG3 418 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 ZNF524Q96C55 264 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 MARS2Q96GW9 593 aaKnown RBP4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 BOD1Q96IK1 185 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 ZNF582Q96NG8 517 aaPredicted RBP4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 ZNF385AQ96PM9 386 aaKnown RBP4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 IL4I1Q96RQ9 567 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 MNTQ99583 582 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 ARHGDIGQ99819 225 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 MARVELD1Q9BSK0 173 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 SSBP3Q9BWW4 388 aaPredicted RBP4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 RSPO3Q9BXY4 272 aaPredicted RBP4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 PLA2G12AQ9BZM1 189 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 METTL17Q9H7H0 456 aaPredicted RBP4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 FGF20Q9NP95 211 aaPredicted RBP4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 MAN2C1Q9NTJ4 1040 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 DNAJC27Q9NZQ0 273 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 CALML5Q9NZT1 146 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 DUX4Q9UBX2 424 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 TESQ9UGI8 421 aaKnown RBP4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 KCNE5Q9UJ90 142 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 TBC1D24Q9ULP9 559 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 ING4Q9UNL4 249 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 RCE1Q9Y256 329 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 RASD1Q9Y272 281 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 SESN1Q9Y6P5 492 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 FBN1P35555 2871 aaKnown RBP4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 NINQ8N4C6 2090 aa4.95□□□□□ -1.62
CACNA1C-229ENST00000496818 LOC105371267A0A1B0GV96 52 aa4.94□□□□□ -1.62
CACNA1C-229ENST00000496818 TMEM129A0AVI4 362 aa4.94□□□□□ -1.62
CACNA1C-229ENST00000496818 ANKRD61A6NGH8 418 aa4.94□□□□□ -1.62
CACNA1C-229ENST00000496818 LIPT2A6NK58 231 aa4.94□□□□□ -1.62
CACNA1C-229ENST00000496818 A8MVM7 634 aa4.94□□□□□ -1.62
CACNA1C-229ENST00000496818 TRIM77I1YAP6 450 aa4.94□□□□□ -1.62
CACNA1C-229ENST00000496818 M0R3H8 397 aa4.94□□□□□ -1.62
CACNA1C-229ENST00000496818 MYL12BO14950 172 aa4.94□□□□□ -1.62
CACNA1C-229ENST00000496818 IGKV3-15P01624 115 aa4.94□□□□□ -1.62
CACNA1C-229ENST00000496818 IGLV1-44P01699 117 aa4.94□□□□□ -1.62
CACNA1C-229ENST00000496818 TFP02787 698 aa4.94□□□□□ -1.62
CACNA1C-229ENST00000496818 DBIP07108 87 aaKnown RBP4.94□□□□□ -1.62
CACNA1C-229ENST00000496818 MSMBP08118 114 aa4.94□□□□□ -1.62
CACNA1C-229ENST00000496818 ZNF43P17038 809 aa4.94□□□□□ -1.62
CACNA1C-229ENST00000496818 MYL12AP19105 171 aa4.94□□□□□ -1.62
CACNA1C-229ENST00000496818 HOXA5P20719 270 aa4.94□□□□□ -1.62
CACNA1C-229ENST00000496818 TNFSF4P23510 183 aa4.94□□□□□ -1.62
CACNA1C-229ENST00000496818 FPR3P25089 353 aa4.94□□□□□ -1.62
CACNA1C-229ENST00000496818 PRKAR1BP31321 381 aa4.94□□□□□ -1.62
CACNA1C-229ENST00000496818 FGF9P31371 208 aaPredicted RBP4.94□□□□□ -1.62
CACNA1C-229ENST00000496818 TNFSF8P32971 234 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms