RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, human

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-233	ENST00000495899	CPT2	P23786	658 aa		10.43	□□□□□ -0.74
MRPL55-233	ENST00000495899	DVL1P1	P54792	670 aa	Predicted RBP	10.43	□□□□□ -0.74
MRPL55-233	ENST00000495899	SNRPG	P62308	76 aa	Known RBP	10.43	□□□□□ -0.74
MRPL55-233	ENST00000495899	EGR3	Q06889	387 aa		10.43	□□□□□ -0.74
MRPL55-233	ENST00000495899	MAB21L1	Q13394	359 aa		10.43	□□□□□ -0.74
MRPL55-233	ENST00000495899	MEDAG	Q5VYS4	303 aa		10.43	□□□□□ -0.74
MRPL55-233	ENST00000495899	ZBTB49	Q6ZSB9	765 aa		10.43	□□□□□ -0.74
MRPL55-233	ENST00000495899	LRRC28	Q86X40	367 aa	Predicted RBP	10.43	□□□□□ -0.74
MRPL55-233	ENST00000495899	SLC35F2	Q8IXU6	374 aa		10.43	□□□□□ -0.74
MRPL55-233	ENST00000495899	FTMT	Q8N4E7	242 aa		10.43	□□□□□ -0.74
MRPL55-233	ENST00000495899	CSNK2A3	Q8NEV1	391 aa		10.43	□□□□□ -0.74
MRPL55-233	ENST00000495899	EME1	Q96AY2	570 aa		10.43	□□□□□ -0.74
MRPL55-233	ENST00000495899	OR8B4	Q96RC9	309 aa		10.43	□□□□□ -0.74
MRPL55-233	ENST00000495899	NARFL	Q9H6Q4	476 aa		10.43	□□□□□ -0.74
MRPL55-233	ENST00000495899	ZNF665	Q9H7R5	613 aa		10.43	□□□□□ -0.74
MRPL55-233	ENST00000495899	IMPAD1	Q9NX62	359 aa		10.43	□□□□□ -0.74
MRPL55-233	ENST00000495899	DNAJC27	Q9NZQ0	273 aa		10.43	□□□□□ -0.74
MRPL55-233	ENST00000495899	ZNF319	Q9P2F9	582 aa		10.43	□□□□□ -0.74
MRPL55-233	ENST00000495899	RRP15	Q9Y3B9	282 aa	Known RBP	10.43	□□□□□ -0.74
MRPL55-233	ENST00000495899	ZFHX3	Q15911	3703 aa		10.43	□□□□□ -0.74
MRPL55-233	ENST00000495899	C2CD3	Q4AC94	2353 aa		10.43	□□□□□ -0.74
MRPL55-233	ENST00000495899	FN1	P02751	2386 aa	Known RBP	10.42	□□□□□ -0.74
MRPL55-233	ENST00000495899	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	10.42	□□□□□ -0.74
MRPL55-233	ENST00000495899	hCG_38984	A0A1B0GV85	526 aa		10.42	□□□□□ -0.74
MRPL55-233	ENST00000495899	TMEM269	A0A1B0GVZ9	245 aa		10.42	□□□□□ -0.74
MRPL55-233	ENST00000495899		A6NHS1	94 aa		10.42	□□□□□ -0.74
MRPL55-233	ENST00000495899	ZNF670-ZNF695	F2Z2N8	137 aa		10.42	□□□□□ -0.74
MRPL55-233	ENST00000495899	PTBP3	O95758	552 aa	Known RBP	10.42	□□□□□ -0.74
MRPL55-233	ENST00000495899	IGHV2-70	P01814	119 aa		10.42	□□□□□ -0.74
MRPL55-233	ENST00000495899	MSMB	P08118	114 aa		10.42	□□□□□ -0.74
MRPL55-233	ENST00000495899	OR2T7	P0C7T2	308 aa		10.42	□□□□□ -0.74
MRPL55-233	ENST00000495899	GSK3A	P49840	483 aa		10.42	□□□□□ -0.74
MRPL55-233	ENST00000495899	BTG1	P62324	171 aa		10.42	□□□□□ -0.74
MRPL55-233	ENST00000495899	ZNF829	Q3KNS6	432 aa	Predicted RBP	10.42	□□□□□ -0.74
MRPL55-233	ENST00000495899	CHRFAM7A	Q494W8	412 aa		10.42	□□□□□ -0.74
MRPL55-233	ENST00000495899	TMEM155	Q4W5P6	130 aa		10.42	□□□□□ -0.74
MRPL55-233	ENST00000495899	ZNF322	Q6U7Q0	402 aa	Predicted RBP	10.42	□□□□□ -0.74
MRPL55-233	ENST00000495899	C1orf87	Q8N0U7	546 aa		10.42	□□□□□ -0.74
MRPL55-233	ENST00000495899	SPIC	Q8N5J4	248 aa		10.42	□□□□□ -0.74
MRPL55-233	ENST00000495899	OR56B2P	Q8NGI1	322 aa		10.42	□□□□□ -0.74
MRPL55-233	ENST00000495899	OR2T27	Q8NH04	317 aa		10.42	□□□□□ -0.74
MRPL55-233	ENST00000495899	FAM81A	Q8TBF8	368 aa		10.42	□□□□□ -0.74
MRPL55-233	ENST00000495899		Q8TCH9	128 aa		10.42	□□□□□ -0.74
MRPL55-233	ENST00000495899	SIGLEC11	Q96RL6	698 aa		10.42	□□□□□ -0.74
MRPL55-233	ENST00000495899	GAL3ST1	Q99999	423 aa		10.42	□□□□□ -0.74
MRPL55-233	ENST00000495899	ADAT1	Q9BUB4	502 aa	Known RBP	10.42	□□□□□ -0.74
MRPL55-233	ENST00000495899	BEX2	Q9BXY8	128 aa		10.42	□□□□□ -0.74
MRPL55-233	ENST00000495899	SHARPIN	Q9H0F6	387 aa		10.42	□□□□□ -0.74
MRPL55-233	ENST00000495899	C14orf119	Q9NWQ9	140 aa		10.42	□□□□□ -0.74
MRPL55-233	ENST00000495899	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	10.42	□□□□□ -0.74
MRPL55-233	ENST00000495899	ABCA1	O95477	2261 aa		10.41	□□□□□ -0.74
MRPL55-233	ENST00000495899		A0A0U1RQV5	110 aa		10.41	□□□□□ -0.74
MRPL55-233	ENST00000495899	ISPD	A4D126	451 aa		10.41	□□□□□ -0.74
MRPL55-233	ENST00000495899	SNTN	A6NMZ2	147 aa		10.41	□□□□□ -0.74
MRPL55-233	ENST00000495899	MPZL2	O60487	215 aa		10.41	□□□□□ -0.74
MRPL55-233	ENST00000495899	BAG2	O95816	211 aa		10.41	□□□□□ -0.74
MRPL55-233	ENST00000495899	IGHV2-5	P01817	119 aa		10.41	□□□□□ -0.74
MRPL55-233	ENST00000495899	ATP6V1E1	P36543	226 aa		10.41	□□□□□ -0.74
MRPL55-233	ENST00000495899	MDH2	P40926	338 aa	Known RBP	10.41	□□□□□ -0.74
MRPL55-233	ENST00000495899	RIDA	P52758	137 aa	Known RBP	10.41	□□□□□ -0.74
MRPL55-233	ENST00000495899	CXCR4	P61073	352 aa		10.41	□□□□□ -0.74
MRPL55-233	ENST00000495899	OR8B8	Q15620	311 aa		10.41	□□□□□ -0.74
MRPL55-233	ENST00000495899	ZIK1	Q3SY52	487 aa	Predicted RBP	10.41	□□□□□ -0.74
MRPL55-233	ENST00000495899	KRT74	Q7RTS7	529 aa		10.41	□□□□□ -0.74
MRPL55-233	ENST00000495899	MOGAT3	Q86VF5	341 aa		10.41	□□□□□ -0.74
MRPL55-233	ENST00000495899	GLCCI1	Q86VQ1	547 aa		10.41	□□□□□ -0.74
MRPL55-233	ENST00000495899	MUC20	Q8N307	709 aa	Predicted RBP	10.41	□□□□□ -0.74
MRPL55-233	ENST00000495899	KLHL36	Q8N4N3	616 aa		10.41	□□□□□ -0.74
MRPL55-233	ENST00000495899	OR51G2	Q8NGK0	314 aa		10.41	□□□□□ -0.74
MRPL55-233	ENST00000495899	OR11L1	Q8NGX0	322 aa		10.41	□□□□□ -0.74
MRPL55-233	ENST00000495899	OR51F2	Q8NH61	342 aa		10.41	□□□□□ -0.74
MRPL55-233	ENST00000495899	RDH12	Q96NR8	316 aa		10.41	□□□□□ -0.74
MRPL55-233	ENST00000495899	MBOAT4	Q96T53	435 aa		10.41	□□□□□ -0.74
MRPL55-233	ENST00000495899	SLC29A1	Q99808	456 aa		10.41	□□□□□ -0.74
MRPL55-233	ENST00000495899	FN3KRP	Q9HA64	309 aa		10.41	□□□□□ -0.74
MRPL55-233	ENST00000495899	ABCB9	Q9NP78	766 aa		10.41	□□□□□ -0.74
MRPL55-233	ENST00000495899	C8orf4	Q9NR00	106 aa		10.41	□□□□□ -0.74
MRPL55-233	ENST00000495899	FAM206A	Q9NX38	181 aa		10.41	□□□□□ -0.74
MRPL55-233	ENST00000495899	IKZF2	Q9UKS7	526 aa		10.41	□□□□□ -0.74
MRPL55-233	ENST00000495899	COPS3	Q9UNS2	423 aa		10.41	□□□□□ -0.74
MRPL55-233	ENST00000495899	TRAV20	A0A0B4J274	112 aa		10.4	□□□□□ -0.74
MRPL55-233	ENST00000495899	FAM157A	C9JC47	383 aa		10.4	□□□□□ -0.74
MRPL55-233	ENST00000495899	ANKRD65	E5RJM6	399 aa		10.4	□□□□□ -0.74
MRPL55-233	ENST00000495899	SULT1C4	O75897	302 aa		10.4	□□□□□ -0.74
MRPL55-233	ENST00000495899	CST4	P01036	141 aa		10.4	□□□□□ -0.74
MRPL55-233	ENST00000495899	IRF2	P14316	349 aa		10.4	□□□□□ -0.74
MRPL55-233	ENST00000495899	ATP6V1B1	P15313	513 aa		10.4	□□□□□ -0.74
MRPL55-233	ENST00000495899	HNF1A	P20823	631 aa		10.4	□□□□□ -0.74
MRPL55-233	ENST00000495899	GNAL	P38405	381 aa		10.4	□□□□□ -0.74
MRPL55-233	ENST00000495899	MAP2K3	P46734	347 aa		10.4	□□□□□ -0.74
MRPL55-233	ENST00000495899	ZMYND11	Q15326	602 aa		10.4	□□□□□ -0.74
MRPL55-233	ENST00000495899	GFOD2	Q3B7J2	385 aa		10.4	□□□□□ -0.74
MRPL55-233	ENST00000495899	FAM120AOS	Q5T036	256 aa		10.4	□□□□□ -0.74
MRPL55-233	ENST00000495899	OR8B12	Q8NGG6	310 aa		10.4	□□□□□ -0.74
MRPL55-233	ENST00000495899	ZNF420	Q8TAQ5	688 aa	Predicted RBP	10.4	□□□□□ -0.74
MRPL55-233	ENST00000495899	UBE2F	Q969M7	185 aa		10.4	□□□□□ -0.74
MRPL55-233	ENST00000495899	TMEM186	Q96B77	213 aa		10.4	□□□□□ -0.74
MRPL55-233	ENST00000495899	PBOV1	Q9GZY1	135 aa		10.4	□□□□□ -0.74
MRPL55-233	ENST00000495899	MOB1A	Q9H8S9	216 aa		10.4	□□□□□ -0.74
MRPL55-233	ENST00000495899	DCAF16	Q9NXF7	216 aa		10.4	□□□□□ -0.74

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