RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 LMO1P25800 156 aa13.6□□□□□ -0.23
SDF4-207ENST00000494748 CRABP1P29762 137 aa13.6□□□□□ -0.23
SDF4-207ENST00000494748 C1orf140Q5VVS0 124 aa13.6□□□□□ -0.23
SDF4-207ENST00000494748 DEGS2Q6QHC5 323 aa13.6□□□□□ -0.23
SDF4-207ENST00000494748 Q6ZRG5 221 aa13.6□□□□□ -0.23
SDF4-207ENST00000494748 ANGPTL5Q86XS5 388 aa13.6□□□□□ -0.23
SDF4-207ENST00000494748 OR5AS1Q8N127 324 aa13.6□□□□□ -0.23
SDF4-207ENST00000494748 ASB10Q8WXI3 467 aa13.6□□□□□ -0.23
SDF4-207ENST00000494748 ISOC2Q96AB3 205 aa13.6□□□□□ -0.23
SDF4-207ENST00000494748 OCSTAMPQ9BR26 566 aa13.6□□□□□ -0.23
SDF4-207ENST00000494748 TMED7-TICAM2A0A0A6YYA0 188 aa13.6□□□□□ -0.23
SDF4-207ENST00000494748 A0A1W2PPH5 198 aa13.6□□□□□ -0.23
SDF4-207ENST00000494748 MS4A18H0YCH9 400 aa13.6□□□□□ -0.23
SDF4-207ENST00000494748 TAAR5O14804 337 aa13.6□□□□□ -0.23
SDF4-207ENST00000494748 ZNF354AO60765 605 aaPredicted RBP13.6□□□□□ -0.23
SDF4-207ENST00000494748 SCGNO76038 276 aa13.6□□□□□ -0.23
SDF4-207ENST00000494748 CSNK1EP49674 416 aaKnown RBP13.6□□□□□ -0.23
SDF4-207ENST00000494748 EMP2P54851 167 aa13.6□□□□□ -0.23
SDF4-207ENST00000494748 ZNF239Q16600 458 aaKnown RBP13.6□□□□□ -0.23
SDF4-207ENST00000494748 MS4A18Q3C1V0 323 aa13.6□□□□□ -0.23
SDF4-207ENST00000494748 SPACA5Q96QH8 159 aa13.6□□□□□ -0.23
SDF4-207ENST00000494748 NRSN2Q9GZP1 204 aa13.6□□□□□ -0.23
SDF4-207ENST00000494748 AMDHD2Q9Y303 409 aa13.6□□□□□ -0.23
SDF4-207ENST00000494748 RP1P56715 2156 aa13.6□□□□□ -0.23
SDF4-207ENST00000494748 A0A1W2PP11 408 aa13.6□□□□□ -0.23
SDF4-207ENST00000494748 C7orf77A4D0Y5 90 aa13.6□□□□□ -0.23
SDF4-207ENST00000494748 C5orf67F2Z3F1 127 aa13.6□□□□□ -0.23
SDF4-207ENST00000494748 GLRA1P23415 457 aa13.6□□□□□ -0.23
SDF4-207ENST00000494748 ADH6P28332 368 aa13.6□□□□□ -0.23
SDF4-207ENST00000494748 KDF1Q8NAX2 398 aaPredicted RBP13.6□□□□□ -0.23
SDF4-207ENST00000494748 OR13C9Q8NGT0 318 aa13.6□□□□□ -0.23
SDF4-207ENST00000494748 ZNF285Q96NJ3 590 aa13.6□□□□□ -0.23
SDF4-207ENST00000494748 YPEL4Q96NS1 127 aa13.6□□□□□ -0.23
SDF4-207ENST00000494748 SOX7Q9BT81 388 aa13.6□□□□□ -0.23
SDF4-207ENST00000494748 RPS10P5Q9NQ39 176 aa13.6□□□□□ -0.23
SDF4-207ENST00000494748 KPTNQ9Y664 436 aa13.6□□□□□ -0.23
SDF4-207ENST00000494748 TSPAN2O60636 221 aa13.59□□□□□ -0.23
SDF4-207ENST00000494748 DDAH2O95865 285 aa13.59□□□□□ -0.23
SDF4-207ENST00000494748 CST4P01036 141 aa13.59□□□□□ -0.23
SDF4-207ENST00000494748 GSTP1P09211 210 aaKnown RBP13.59□□□□□ -0.23
SDF4-207ENST00000494748 HNRNPA2B1P22626 353 aaKnown RBP13.59□□□□□ -0.23
SDF4-207ENST00000494748 NTSR1P30989 418 aa13.59□□□□□ -0.23
SDF4-207ENST00000494748 TDGQ13569 410 aa13.59□□□□□ -0.23
SDF4-207ENST00000494748 FAM76BQ5HYJ3 339 aa13.59□□□□□ -0.23
SDF4-207ENST00000494748 COL13A1Q5TAT6 717 aaPredicted RBP13.59□□□□□ -0.23
SDF4-207ENST00000494748 Q7L0L9 218 aa13.59□□□□□ -0.23
SDF4-207ENST00000494748 OOSP2Q86WS3 158 aa13.59□□□□□ -0.23
SDF4-207ENST00000494748 ADAMTS18Q8TE60 1221 aa13.59□□□□□ -0.23
SDF4-207ENST00000494748 ZNF721Q8TF20 911 aa13.59□□□□□ -0.23
SDF4-207ENST00000494748 SLC46A1Q96NT5 459 aa13.59□□□□□ -0.23
SDF4-207ENST00000494748 KCNK17Q96T54 332 aa13.59□□□□□ -0.23
SDF4-207ENST00000494748 CDC14BO60729 498 aa13.59□□□□□ -0.23
SDF4-207ENST00000494748 TNFRSF4P43489 277 aa13.59□□□□□ -0.23
SDF4-207ENST00000494748 ZNF84P51523 738 aa13.59□□□□□ -0.23
SDF4-207ENST00000494748 AKIRIN2Q53H80 203 aa13.59□□□□□ -0.23
SDF4-207ENST00000494748 ZNF600Q6ZNG1 722 aa13.59□□□□□ -0.23
SDF4-207ENST00000494748 RPP25Q9BUL9 199 aaKnown RBP13.59□□□□□ -0.23
SDF4-207ENST00000494748 PBOV1Q9GZY1 135 aa13.59□□□□□ -0.23
SDF4-207ENST00000494748 ARV1Q9H2C2 271 aa13.59□□□□□ -0.23
SDF4-207ENST00000494748 hCG_1809904A0A1W2PP81 198 aa13.59□□□□□ -0.23
SDF4-207ENST00000494748 A0A1W2PR64 198 aa13.59□□□□□ -0.23
SDF4-207ENST00000494748 A0A1W2PRV1 198 aa13.59□□□□□ -0.23
SDF4-207ENST00000494748 CDC14CA4D256 554 aa13.59□□□□□ -0.23
SDF4-207ENST00000494748 FOXI3A8MTJ6 420 aaPredicted RBP13.59□□□□□ -0.23
SDF4-207ENST00000494748 MASP2O00187 686 aa13.59□□□□□ -0.23
SDF4-207ENST00000494748 SNCAP37840 140 aa13.59□□□□□ -0.23
SDF4-207ENST00000494748 GNALP38405 381 aa13.59□□□□□ -0.23
SDF4-207ENST00000494748 CRIP3Q6Q6R5 217 aa13.59□□□□□ -0.23
SDF4-207ENST00000494748 MALSU1Q96EH3 234 aa13.59□□□□□ -0.23
SDF4-207ENST00000494748 MMABQ96EY8 250 aaPredicted RBP13.59□□□□□ -0.23
SDF4-207ENST00000494748 RSRP1Q9BUV0 290 aa13.59□□□□□ -0.23
SDF4-207ENST00000494748 FBXL17Q9UF56 701 aa13.59□□□□□ -0.23
SDF4-207ENST00000494748 A0A1W2PQD3 144 aa13.58□□□□□ -0.24
SDF4-207ENST00000494748 ALG1L2C9J202 215 aa13.58□□□□□ -0.24
SDF4-207ENST00000494748 GAPDHP04406 335 aaKnown RBP13.58□□□□□ -0.24
SDF4-207ENST00000494748 DAOP14920 347 aa13.58□□□□□ -0.24
SDF4-207ENST00000494748 RAB5AP20339 215 aa13.58□□□□□ -0.24
SDF4-207ENST00000494748 ZNF93P35789 620 aaPredicted RBP13.58□□□□□ -0.24
SDF4-207ENST00000494748 OR3A4PP47883 348 aa13.58□□□□□ -0.24
SDF4-207ENST00000494748 ACTBL2Q562R1 376 aa13.58□□□□□ -0.24
SDF4-207ENST00000494748 PPP1R3BQ86XI6 285 aa13.58□□□□□ -0.24
SDF4-207ENST00000494748 SSC4DQ8WTU2 575 aa13.58□□□□□ -0.24
SDF4-207ENST00000494748 CNTNAP3Q9BZ76 1288 aa13.58□□□□□ -0.24
SDF4-207ENST00000494748 A8MVM7 634 aa13.58□□□□□ -0.24
SDF4-207ENST00000494748 CHRM2P08172 466 aa13.58□□□□□ -0.24
SDF4-207ENST00000494748 ZNF17P17021 662 aa13.58□□□□□ -0.24
SDF4-207ENST00000494748 PTGER4P35408 488 aa13.58□□□□□ -0.24
SDF4-207ENST00000494748 POLR2HP52434 150 aaKnown RBP13.58□□□□□ -0.24
SDF4-207ENST00000494748 Q6ZSR6 202 aa13.58□□□□□ -0.24
SDF4-207ENST00000494748 RAB3CQ96E17 227 aa13.58□□□□□ -0.24
SDF4-207ENST00000494748 DZANK1Q9NVP4 752 aa13.58□□□□□ -0.24
SDF4-207ENST00000494748 S100A9P06702 114 aaKnown RBP13.57□□□□□ -0.24
SDF4-207ENST00000494748 S100PP25815 95 aa13.57□□□□□ -0.24
SDF4-207ENST00000494748 ZNF542PQ5EBM4 170 aa13.57□□□□□ -0.24
SDF4-207ENST00000494748 NSUN5P2Q63ZY6 315 aa13.57□□□□□ -0.24
SDF4-207ENST00000494748 GLIPR1L1Q6UWM5 242 aa13.57□□□□□ -0.24
SDF4-207ENST00000494748 OR13H1Q8NG92 308 aa13.57□□□□□ -0.24
SDF4-207ENST00000494748 BSCL2Q96G97 398 aaPredicted RBP13.57□□□□□ -0.24
SDF4-207ENST00000494748 ARHGAP5-AS1Q96IT6 56 aa13.57□□□□□ -0.24
SDF4-207ENST00000494748 METTL8Q9H825 291 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms