RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 OR51V1Q9H2C8 321 aa11.23□□□□□ -0.61
ERCC3-209ENST00000494464 ADGRL4Q9HBW9 690 aa11.23□□□□□ -0.61
ERCC3-209ENST00000494464 POLR1DQ9Y2S0 133 aa11.23□□□□□ -0.61
ERCC3-209ENST00000494464 A3GALT2U3KPV4 340 aa11.23□□□□□ -0.61
ERCC3-209ENST00000494464 CUBNO60494 3623 aa11.23□□□□□ -0.61
ERCC3-209ENST00000494464 PLSCR5A0PG75 271 aa11.22□□□□□ -0.61
ERCC3-209ENST00000494464 ZSCAN5BA6NJL1 495 aa11.22□□□□□ -0.61
ERCC3-209ENST00000494464 IL2RGP31785 369 aa11.22□□□□□ -0.61
ERCC3-209ENST00000494464 CRYBB2P43320 205 aa11.22□□□□□ -0.61
ERCC3-209ENST00000494464 RPS7P62081 194 aaKnown RBP11.22□□□□□ -0.61
ERCC3-209ENST00000494464 CCL8P80075 99 aa11.22□□□□□ -0.61
ERCC3-209ENST00000494464 GALEQ14376 348 aa11.22□□□□□ -0.61
ERCC3-209ENST00000494464 CCDC92Q53HC0 331 aaPredicted RBP11.22□□□□□ -0.61
ERCC3-209ENST00000494464 OR2G6Q5TZ20 316 aa11.22□□□□□ -0.61
ERCC3-209ENST00000494464 ZNF322Q6U7Q0 402 aaPredicted RBP11.22□□□□□ -0.61
ERCC3-209ENST00000494464 OR6V1Q8N148 313 aa11.22□□□□□ -0.61
ERCC3-209ENST00000494464 CYB561A3Q8NBI2 242 aa11.22□□□□□ -0.61
ERCC3-209ENST00000494464 SLC26A10Q8NG04 563 aa11.22□□□□□ -0.61
ERCC3-209ENST00000494464 OR1F12Q8NHA8 337 aa11.22□□□□□ -0.61
ERCC3-209ENST00000494464 GTF3AQ92664 365 aaKnown RBP11.22□□□□□ -0.61
ERCC3-209ENST00000494464 DCLRE1CQ96SD1 692 aaKnown RBP11.22□□□□□ -0.61
ERCC3-209ENST00000494464 CNN2Q99439 309 aaKnown RBP11.22□□□□□ -0.61
ERCC3-209ENST00000494464 COQ7Q99807 217 aa11.22□□□□□ -0.61
ERCC3-209ENST00000494464 CHCHD6Q9BRQ6 235 aa11.22□□□□□ -0.61
ERCC3-209ENST00000494464 SLIRPQ9GZT3 109 aaKnown RBP11.22□□□□□ -0.61
ERCC3-209ENST00000494464 SHARPINQ9H0F6 387 aa11.22□□□□□ -0.61
ERCC3-209ENST00000494464 HDHD2Q9H0R4 259 aa11.22□□□□□ -0.61
ERCC3-209ENST00000494464 SAP30LQ9HAJ7 183 aa11.22□□□□□ -0.61
ERCC3-209ENST00000494464 B9D1Q9UPM9 204 aa11.22□□□□□ -0.61
ERCC3-209ENST00000494464 LHFPL6Q9Y693 200 aa11.22□□□□□ -0.61
ERCC3-209ENST00000494464 DNHD1Q96M86 4753 aa11.21□□□□□ -0.61
ERCC3-209ENST00000494464 IGHV1-69-2A0A0G2JMI3 117 aa11.21□□□□□ -0.61
ERCC3-209ENST00000494464 GPX5O75715 221 aa11.21□□□□□ -0.61
ERCC3-209ENST00000494464 TGFAP01135 160 aa11.21□□□□□ -0.61
ERCC3-209ENST00000494464 IFNA2P01563 188 aa11.21□□□□□ -0.61
ERCC3-209ENST00000494464 IGHV1-46P01743 117 aa11.21□□□□□ -0.61
ERCC3-209ENST00000494464 TFP02787 698 aa11.21□□□□□ -0.61
ERCC3-209ENST00000494464 CLUP10909 449 aa11.21□□□□□ -0.61
ERCC3-209ENST00000494464 GABRA5P31644 462 aa11.21□□□□□ -0.61
ERCC3-209ENST00000494464 DCTN2Q13561 401 aaKnown RBP11.21□□□□□ -0.61
ERCC3-209ENST00000494464 GPR50Q13585 617 aa11.21□□□□□ -0.61
ERCC3-209ENST00000494464 OTPQ5XKR4 325 aa11.21□□□□□ -0.61
ERCC3-209ENST00000494464 LHFPL3Q86UP9 236 aa11.21□□□□□ -0.61
ERCC3-209ENST00000494464 LINC01356Q8N9X3 169 aa11.21□□□□□ -0.61
ERCC3-209ENST00000494464 GJC3Q8NFK1 279 aa11.21□□□□□ -0.61
ERCC3-209ENST00000494464 CLDND2Q8NHS1 167 aa11.21□□□□□ -0.61
ERCC3-209ENST00000494464 GATAD2BQ8WXI9 593 aa11.21□□□□□ -0.61
ERCC3-209ENST00000494464 ELMOD3Q96FG2 381 aa11.21□□□□□ -0.61
ERCC3-209ENST00000494464 DIRC2Q96SL1 478 aa11.21□□□□□ -0.61
ERCC3-209ENST00000494464 CENPOQ9BU64 300 aa11.21□□□□□ -0.61
ERCC3-209ENST00000494464 ALG8Q9BVK2 526 aa11.21□□□□□ -0.61
ERCC3-209ENST00000494464 BEX2Q9BXY8 128 aa11.21□□□□□ -0.61
ERCC3-209ENST00000494464 RPRD1BQ9NQG5 326 aaKnown RBP11.21□□□□□ -0.61
ERCC3-209ENST00000494464 DECR2Q9NUI1 292 aa11.21□□□□□ -0.61
ERCC3-209ENST00000494464 ZDHHC8Q9ULC8 765 aa11.21□□□□□ -0.61
ERCC3-209ENST00000494464 LOC100506127A0A0U1RQW1 187 aa11.2□□□□□ -0.62
ERCC3-209ENST00000494464 DAPL1A0PJW8 107 aa11.2□□□□□ -0.62
ERCC3-209ENST00000494464 OR6C68A6NDL8 312 aa11.2□□□□□ -0.62
ERCC3-209ENST00000494464 METTL15A6NJ78 407 aa11.2□□□□□ -0.62
ERCC3-209ENST00000494464 RER1O15258 196 aa11.2□□□□□ -0.62
ERCC3-209ENST00000494464 PPIHO43447 177 aaKnown RBP11.2□□□□□ -0.62
ERCC3-209ENST00000494464 GLCEO94923 617 aa11.2□□□□□ -0.62
ERCC3-209ENST00000494464 GPANK1O95872 356 aa11.2□□□□□ -0.62
ERCC3-209ENST00000494464 CD55P08174 381 aa11.2□□□□□ -0.62
ERCC3-209ENST00000494464 SPI1P17947 270 aa11.2□□□□□ -0.62
ERCC3-209ENST00000494464 HNF1AP20823 631 aa11.2□□□□□ -0.62
ERCC3-209ENST00000494464 KITLGP21583 273 aa11.2□□□□□ -0.62
ERCC3-209ENST00000494464 GALP22466 123 aa11.2□□□□□ -0.62
ERCC3-209ENST00000494464 TAS2R43P59537 309 aa11.2□□□□□ -0.62
ERCC3-209ENST00000494464 PSG7Q13046 419 aa11.2□□□□□ -0.62
ERCC3-209ENST00000494464 MEP1BQ16820 701 aa11.2□□□□□ -0.62
ERCC3-209ENST00000494464 LIPKQ5VXJ0 399 aa11.2□□□□□ -0.62
ERCC3-209ENST00000494464 CD200R1LQ6Q8B3 271 aa11.2□□□□□ -0.62
ERCC3-209ENST00000494464 SPRYD4Q8WW59 207 aaPredicted RBP11.2□□□□□ -0.62
ERCC3-209ENST00000494464 SLC7A6Q92536 515 aa11.2□□□□□ -0.62
ERCC3-209ENST00000494464 NXF2Q9GZY0 626 aaKnown RBP11.2□□□□□ -0.62
ERCC3-209ENST00000494464 POFUT1Q9H488 388 aa11.2□□□□□ -0.62
ERCC3-209ENST00000494464 PLGRKTQ9HBL7 147 aa11.2□□□□□ -0.62
ERCC3-209ENST00000494464 KCNG2Q9UJ96 466 aa11.2□□□□□ -0.62
ERCC3-209ENST00000494464 SSR3Q9UNL2 185 aa11.2□□□□□ -0.62
ERCC3-209ENST00000494464 SF3B6Q9Y3B4 125 aaKnown RBP11.2□□□□□ -0.62
ERCC3-209ENST00000494464 B4DSR2 109 aa11.19□□□□□ -0.62
ERCC3-209ENST00000494464 CLDN25C9JDP6 229 aa11.19□□□□□ -0.62
ERCC3-209ENST00000494464 ZNF670-ZNF695F2Z2N8 137 aa11.19□□□□□ -0.62
ERCC3-209ENST00000494464 TPD52L2O43399 206 aaKnown RBP11.19□□□□□ -0.62
ERCC3-209ENST00000494464 SPRY3O43610 288 aa11.19□□□□□ -0.62
ERCC3-209ENST00000494464 TIMM8AO60220 97 aaPredicted RBP11.19□□□□□ -0.62
ERCC3-209ENST00000494464 CDC14BO60729 498 aa11.19□□□□□ -0.62
ERCC3-209ENST00000494464 GYPBP06028 91 aa11.19□□□□□ -0.62
ERCC3-209ENST00000494464 OR2T7P0C7T2 308 aa11.19□□□□□ -0.62
ERCC3-209ENST00000494464 TGFBR1P36897 503 aa11.19□□□□□ -0.62
ERCC3-209ENST00000494464 CENPAP49450 140 aa11.19□□□□□ -0.62
ERCC3-209ENST00000494464 DVL1P1P54792 670 aaPredicted RBP11.19□□□□□ -0.62
ERCC3-209ENST00000494464 ACTA2P62736 377 aa11.19□□□□□ -0.62
ERCC3-209ENST00000494464 ACTG2P63267 376 aa11.19□□□□□ -0.62
ERCC3-209ENST00000494464 ZNF85Q03923 595 aa11.19□□□□□ -0.62
ERCC3-209ENST00000494464 HFEQ30201 348 aa11.19□□□□□ -0.62
ERCC3-209ENST00000494464 KRTAP27-1Q3LI81 207 aa11.19□□□□□ -0.62
ERCC3-209ENST00000494464 FAM120AOSQ5T036 256 aa11.19□□□□□ -0.62
ERCC3-209ENST00000494464 LINC01590Q5TEZ4 76 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms