RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 A0A1W2PS29 197 aa9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 MCIDASD6RGH6 385 aa9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 CYR61O00622 381 aa9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 WIPF1O43516 503 aa9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 ATG12O94817 140 aa9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 GYPBP06028 91 aa9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 OR4E1P0C645 316 aa9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 TACR3P29371 465 aa9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 PTGER1P34995 402 aa9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 NANOS3P60323 173 aaKnown RBP9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 IGLV3-21P80748 117 aaPredicted RBP9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 PLAURQ03405 335 aa9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 SNTB1Q13884 538 aaKnown RBP9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 RUNX2Q13950 521 aa9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 DAZAP2Q15038 168 aaPredicted RBP9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 OR1C1Q15619 314 aa9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 C4orf46Q504U0 113 aa9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 TRMT12Q53H54 448 aaKnown RBP9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 NKAPLQ5M9Q1 402 aa9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 LIPNQ5VXI9 398 aa9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 WBP2NLQ6ICG8 309 aa9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 C11orf87Q6NUJ2 197 aa9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 C3orf33Q6P1S2 294 aa9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 FIGLAQ6QHK4 219 aa9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 IL34Q6ZMJ4 242 aa9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 FAM122BQ7Z309 247 aa9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 GALNTL5Q7Z4T8 443 aa9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 GABRG1Q8N1C3 465 aa9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 CIARTQ8N365 385 aaPredicted RBP9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 RPRMLQ8N4K4 120 aa9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 RFLNBQ8N5W9 214 aa9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 OR6K6Q8NGW6 343 aa9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 OR2G2Q8NGZ5 317 aa9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 MARC2Q969Z3 335 aa9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 LRRC46Q96FV0 321 aa9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 C4orf45Q96LM5 186 aa9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 IFT22Q9H7X7 185 aa9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 TAS2R3Q9NYW6 316 aa9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 GPR160Q9UJ42 338 aa9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 LAMP5Q9UJQ1 280 aa9.37□□□□□ -0.91
PDLIM1-205ENST00000493949 A0A0B4J2A0 478 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 A0A1B0GTH9 108 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 OR6C68A6NDL8 312 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 SERINC4A6NH21 518 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 A8MUA0 341 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 FGF16O43320 207 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 CRLF1O75462 422 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 NEURL1O76050 574 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 SNAPINO95295 136 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 RAB3DO95716 219 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 CYB5AP00167 134 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 IL2RAP01589 272 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 APOC3P02656 99 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 SP1P08047 785 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 NGFRP08138 427 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 ADRA2CP18825 462 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 CBX5P45973 191 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 SLC6A8P48029 635 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 DCAF7P61962 342 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 ROM1Q03395 351 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 PMPCAQ10713 525 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 SFRP5Q5T4F7 317 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 SPINK14Q6IE38 97 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 OR7E24Q6IFN5 339 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 LEG1Q6P5S2 330 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 KCTD18Q6PI47 426 aaPredicted RBP9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 C5orf46Q6UWT4 87 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 DRAM2Q6UX65 266 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 NHLRC1Q6VVB1 395 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 ZNF813Q6ZN06 617 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 ZNF676Q8N7Q3 588 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 LRRC75AQ8NAA5 344 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 ARL11Q969Q4 196 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 ADAD1Q96M93 576 aaKnown RBP9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 INTS14Q96SY0 518 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 TGIF2Q9GZN2 237 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 PLEKHF2Q9H8W4 249 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 FKRPQ9H9S5 495 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 BIN3Q9NQY0 253 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 CRIM1Q9NZV1 1036 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 MRPL15Q9P015 296 aaKnown RBP9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 FRRS1LQ9P0K9 344 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 SHPKQ9UHJ6 478 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 MRM2Q9UI43 246 aaKnown RBP9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 POMT1Q9Y6A1 747 aa9.36□□□□□ -0.91
PDLIM1-205ENST00000493949 TRBV6-7A0A0A0MS04 114 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 TRAV14DV4A0A0A6YYC5 116 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 A0A1W2PPK0 400 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 OR2W5A6NFC9 320 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 OR5H14A6NHG9 310 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 ELOA3DA6NLF2 546 aaPredicted RBP9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 F8VVB4 439 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 F8VWA3 439 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 H7C1Q1 480 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 FGF17O60258 216 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 CBX7O95931 251 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 APOC1P02654 83 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 RLN2P04090 185 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 TPT1P13693 172 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms