RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 OR51A2Q8NGJ7 313 aa12.18□□□□□ -0.46
VCP-207ENST00000493886 OR2AJ1Q8NGZ0 328 aa12.18□□□□□ -0.46
VCP-207ENST00000493886 NKD1Q969G9 470 aa12.18□□□□□ -0.46
VCP-207ENST00000493886 SGCZQ96LD1 299 aa12.18□□□□□ -0.46
VCP-207ENST00000493886 TAAR9Q96RI9 348 aa12.18□□□□□ -0.46
VCP-207ENST00000493886 PHF3Q92576 2039 aaKnown RBP12.18□□□□□ -0.46
VCP-207ENST00000493886 TMEM272A0A1B0GTI8 110 aa12.18□□□□□ -0.46
VCP-207ENST00000493886 hCG_1807616A0A1W2PRN6 198 aa12.18□□□□□ -0.46
VCP-207ENST00000493886 LMX1BO60663 402 aa12.18□□□□□ -0.46
VCP-207ENST00000493886 CPN1P15169 458 aa12.18□□□□□ -0.46
VCP-207ENST00000493886 GPX4P36969 197 aaPredicted RBP12.18□□□□□ -0.46
VCP-207ENST00000493886 SORDQ00796 357 aa12.18□□□□□ -0.46
VCP-207ENST00000493886 HLXQ14774 488 aaPredicted RBP12.18□□□□□ -0.46
VCP-207ENST00000493886 NHLRC3Q5JS37 347 aa12.18□□□□□ -0.46
VCP-207ENST00000493886 CFAP161Q6P656 301 aa12.18□□□□□ -0.46
VCP-207ENST00000493886 TMEM41AQ96HV5 264 aa12.18□□□□□ -0.46
VCP-207ENST00000493886 FARSAQ9Y285 508 aaKnown RBP12.18□□□□□ -0.46
VCP-207ENST00000493886 GPR179Q6PRD1 2367 aa12.18□□□□□ -0.46
VCP-207ENST00000493886 MEGF11A6BM72 1044 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 TLX3O43711 291 aaPredicted RBP12.17□□□□□ -0.46
VCP-207ENST00000493886 CBR3O75828 277 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 TTRP02766 147 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 JMJD7P0C870 316 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 FAUP35544 74 aaKnown RBP12.17□□□□□ -0.46
VCP-207ENST00000493886 AKIRIN2Q53H80 203 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 C9orf152Q5JTZ5 239 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 DPPA2Q7Z7J5 298 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 OR2AK2Q8NG84 335 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 DTD1Q8TEA8 209 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 SLC25A28Q96A46 364 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 PBOV1Q9GZY1 135 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 MIOXQ9UGB7 285 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 NCOR1O75376 2440 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 LDLRAD4O15165 306 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 RP2O75695 350 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 HPP00738 406 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 CD37P11049 281 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 HTR2CP28335 458 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 S100A11P31949 105 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 GNALP38405 381 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 CARD18P57730 90 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 SPOCK1Q08629 439 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 GLYATL3Q5SZD4 288 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 DNM1P46Q6ZS02 220 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 LOXL4Q96JB6 756 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 SLC17A5Q9NRA2 495 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 ZNF230Q9UIE0 474 aaPredicted RBP12.17□□□□□ -0.46
VCP-207ENST00000493886 IGHV3-15A0A0B4J1V0 119 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 ZNF878C9JN71 531 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 F5H5P2 479 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 LPLP06858 475 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 NMBP08949 121 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 ZNF17P17021 662 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 PRSS3P35030 304 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 RAB13P51153 203 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 LRRC37A5PQ49AS3 106 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 TMUB2Q71RG4 321 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 SLC36A1Q7Z2H8 476 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 DMRTA2Q96SC8 542 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 MRPS18BQ9Y676 258 aaKnown RBP12.17□□□□□ -0.46
VCP-207ENST00000493886 WDFY4Q6ZS81 3184 aa12.17□□□□□ -0.46
VCP-207ENST00000493886 OR2A4O95047 310 aa12.16□□□□□ -0.46
VCP-207ENST00000493886 P04436 131 aa12.16□□□□□ -0.46
VCP-207ENST00000493886 SCGB2B2Q4G0G5 96 aa12.16□□□□□ -0.46
VCP-207ENST00000493886 PLA2G2CQ5R387 149 aa12.16□□□□□ -0.46
VCP-207ENST00000493886 GALNT16Q8N428 558 aa12.16□□□□□ -0.46
VCP-207ENST00000493886 JAGN1Q8N5M9 183 aa12.16□□□□□ -0.46
VCP-207ENST00000493886 RELL2Q8NC24 303 aaPredicted RBP12.16□□□□□ -0.46
VCP-207ENST00000493886 OR6M1Q8NGM8 313 aa12.16□□□□□ -0.46
VCP-207ENST00000493886 OR2A7Q96R45 310 aa12.16□□□□□ -0.46
VCP-207ENST00000493886 UCN2Q96RP3 112 aa12.16□□□□□ -0.46
VCP-207ENST00000493886 PIGQQ9BRB3 760 aa12.16□□□□□ -0.46
VCP-207ENST00000493886 DDA1Q9BW61 102 aa12.16□□□□□ -0.46
VCP-207ENST00000493886 POFUT1Q9H488 388 aa12.16□□□□□ -0.46
VCP-207ENST00000493886 KCNMB2Q9Y691 235 aa12.16□□□□□ -0.46
VCP-207ENST00000493886 A0A0G2JMM0 328 aa12.16□□□□□ -0.46
VCP-207ENST00000493886 A0A1W2PPB8 328 aa12.16□□□□□ -0.46
VCP-207ENST00000493886 A0A1W2PRS3 328 aa12.16□□□□□ -0.46
VCP-207ENST00000493886 SNRPGP15A8MWD9 76 aa12.16□□□□□ -0.46
VCP-207ENST00000493886 KIR3DP1A8MWS1 328 aa12.16□□□□□ -0.46
VCP-207ENST00000493886 IL5P05113 134 aa12.16□□□□□ -0.46
VCP-207ENST00000493886 CSF1P09603 554 aa12.16□□□□□ -0.46
VCP-207ENST00000493886 AKAIN1P0CW23 69 aa12.16□□□□□ -0.46
VCP-207ENST00000493886 CD59P13987 128 aa12.16□□□□□ -0.46
VCP-207ENST00000493886 HSD11B1P28845 292 aa12.16□□□□□ -0.46
VCP-207ENST00000493886 CSNK2A1P68400 391 aaPredicted RBP12.16□□□□□ -0.46
VCP-207ENST00000493886 KCNMB1Q16558 191 aa12.16□□□□□ -0.46
VCP-207ENST00000493886 NKPD1Q17RQ9 610 aa12.16□□□□□ -0.46
VCP-207ENST00000493886 SSX9Q7RTT3 188 aa12.16□□□□□ -0.46
VCP-207ENST00000493886 FGGYQ96C11 551 aa12.16□□□□□ -0.46
VCP-207ENST00000493886 WBP1Q96G27 269 aa12.16□□□□□ -0.46
VCP-207ENST00000493886 NAA11Q9BSU3 229 aaPredicted RBP12.16□□□□□ -0.46
VCP-207ENST00000493886 RYDENQ9NUL5 291 aaKnown RBP12.16□□□□□ -0.46
VCP-207ENST00000493886 A0A0J9YW62 118 aa12.15□□□□□ -0.46
VCP-207ENST00000493886 C9orf172C9J069 976 aa12.15□□□□□ -0.46
VCP-207ENST00000493886 SYT7O43581 403 aa12.15□□□□□ -0.46
VCP-207ENST00000493886 VAMP5O95183 116 aa12.15□□□□□ -0.46
VCP-207ENST00000493886 ATXN7L3Q14CW9 347 aaPredicted RBP12.15□□□□□ -0.46
VCP-207ENST00000493886 TAF13Q15543 124 aa12.15□□□□□ -0.46
VCP-207ENST00000493886 STEAP1BQ6NZ63 245 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms