RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 CNRIP1Q96F85 164 aaPredicted RBP18.16■□□□□ 0.5
RNF40-203ENST00000493683 RCL1Q9Y2P8 373 aaKnown RBP18.16■□□□□ 0.5
RNF40-203ENST00000493683 POM121BA6NF01 834 aa18.15■□□□□ 0.5
RNF40-203ENST00000493683 SNCGO76070 127 aa18.15■□□□□ 0.5
RNF40-203ENST00000493683 ETHE1O95571 254 aa18.15■□□□□ 0.5
RNF40-203ENST00000493683 EMP3P54852 163 aa18.15■□□□□ 0.5
RNF40-203ENST00000493683 KIRREL2Q6UWL6 708 aa18.15■□□□□ 0.5
RNF40-203ENST00000493683 TMEM104Q8NE00 496 aa18.15■□□□□ 0.5
RNF40-203ENST00000493683 APOBEC3DQ96AK3 386 aaPredicted RBP18.15■□□□□ 0.5
RNF40-203ENST00000493683 RAB18Q9NP72 206 aa18.15■□□□□ 0.5
RNF40-203ENST00000493683 MED29Q9NX70 200 aa18.15■□□□□ 0.5
RNF40-203ENST00000493683 CHD4Q14839 1912 aa18.15■□□□□ 0.5
RNF40-203ENST00000493683 NWD2Q9ULI1 1742 aa18.15■□□□□ 0.5
RNF40-203ENST00000493683 CLEC18AA5D8T8 446 aa18.15■□□□□ 0.5
RNF40-203ENST00000493683 TGFBR1P36897 503 aa18.15■□□□□ 0.5
RNF40-203ENST00000493683 KCNAB1Q14722 419 aa18.15■□□□□ 0.5
RNF40-203ENST00000493683 MPPED2Q15777 294 aa18.15■□□□□ 0.5
RNF40-203ENST00000493683 VWA2Q5GFL6 755 aa18.15■□□□□ 0.5
RNF40-203ENST00000493683 CST9Q5W186 159 aa18.15■□□□□ 0.5
RNF40-203ENST00000493683 SLC25A26Q70HW3 274 aa18.15■□□□□ 0.5
RNF40-203ENST00000493683 CLEC18CQ8NCF0 446 aa18.15■□□□□ 0.5
RNF40-203ENST00000493683 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.15■□□□□ 0.5
RNF40-203ENST00000493683 PELI1Q96FA3 418 aa18.15■□□□□ 0.5
RNF40-203ENST00000493683 MAP6Q96JE9 813 aa18.15■□□□□ 0.5
RNF40-203ENST00000493683 CCDC74BQ96LY2 380 aa18.15■□□□□ 0.5
RNF40-203ENST00000493683 SERTM1A2A2V5 107 aa18.15■□□□□ 0.5
RNF40-203ENST00000493683 GP1BAP07359 652 aa18.15■□□□□ 0.5
RNF40-203ENST00000493683 IAPPP10997 89 aa18.15■□□□□ 0.5
RNF40-203ENST00000493683 HAAOP46952 286 aa18.15■□□□□ 0.5
RNF40-203ENST00000493683 GALMQ96C23 342 aa18.15■□□□□ 0.5
RNF40-203ENST00000493683 ZDHHC11Q9H8X9 412 aa18.15■□□□□ 0.5
RNF40-203ENST00000493683 OR5H15A6NDH6 313 aa18.15■□□□□ 0.5
RNF40-203ENST00000493683 OR5H1A6NKK0 313 aa18.15■□□□□ 0.5
RNF40-203ENST00000493683 SULT1A3P0DMM9 295 aa18.15■□□□□ 0.5
RNF40-203ENST00000493683 SULT1A4P0DMN0 295 aa18.15■□□□□ 0.5
RNF40-203ENST00000493683 PPIAP62937 165 aaKnown RBP18.15■□□□□ 0.5
RNF40-203ENST00000493683 NUMA1Q14980 2115 aa18.15■□□□□ 0.5
RNF40-203ENST00000493683 MOGAT2Q3SYC2 334 aa18.15■□□□□ 0.5
RNF40-203ENST00000493683 CXCL13O43927 109 aa18.14■□□□□ 0.5
RNF40-203ENST00000493683 ANKRD34AQ69YU3 496 aa18.14■□□□□ 0.5
RNF40-203ENST00000493683 OR2T2Q6IF00 324 aa18.14■□□□□ 0.5
RNF40-203ENST00000493683 SIRT6Q8N6T7 355 aa18.14■□□□□ 0.5
RNF40-203ENST00000493683 ERGIC1Q969X5 290 aa18.14■□□□□ 0.5
RNF40-203ENST00000493683 ZNF385DQ9H6B1 395 aa18.14■□□□□ 0.5
RNF40-203ENST00000493683 PGA3P0DJD8 388 aa18.14■□□□□ 0.49
RNF40-203ENST00000493683 GPR3P46089 330 aa18.14■□□□□ 0.49
RNF40-203ENST00000493683 NECAP1Q8NC96 275 aa18.14■□□□□ 0.49
RNF40-203ENST00000493683 A4GNTQ9UNA3 340 aa18.14■□□□□ 0.49
RNF40-203ENST00000493683 CBY1Q9Y3M2 126 aa18.14■□□□□ 0.49
RNF40-203ENST00000493683 TMED3Q9Y3Q3 217 aa18.14■□□□□ 0.49
RNF40-203ENST00000493683 A0A0B4J203 849 aa18.14■□□□□ 0.49
RNF40-203ENST00000493683 AKR7A2O43488 359 aa18.14■□□□□ 0.49
RNF40-203ENST00000493683 RPS16P62249 146 aaKnown RBP18.14■□□□□ 0.49
RNF40-203ENST00000493683 SLC25A35Q3KQZ1 300 aa18.14■□□□□ 0.49
RNF40-203ENST00000493683 MMP26Q9NRE1 261 aa18.14■□□□□ 0.49
RNF40-203ENST00000493683 PRRC2BQ5JSZ5 2229 aaKnown RBP18.14■□□□□ 0.49
RNF40-203ENST00000493683 FUT3P21217 361 aa18.14■□□□□ 0.49
RNF40-203ENST00000493683 OCIAD1Q9NX40 245 aa18.14■□□□□ 0.49
RNF40-203ENST00000493683 CLCF1Q9UBD9 225 aa18.14■□□□□ 0.49
RNF40-203ENST00000493683 DDX60Q8IY21 1712 aaKnown RBP18.14■□□□□ 0.49
RNF40-203ENST00000493683 FIGNL2A6NMB9 653 aa18.13■□□□□ 0.49
RNF40-203ENST00000493683 DBX1A6NMT0 343 aa18.13■□□□□ 0.49
RNF40-203ENST00000493683 FGF7P21781 194 aa18.13■□□□□ 0.49
RNF40-203ENST00000493683 PJVKQ0ZLH3 352 aa18.13■□□□□ 0.49
RNF40-203ENST00000493683 OR2V1Q8NHB1 315 aa18.13■□□□□ 0.49
RNF40-203ENST00000493683 A0A1W2PPC4 97 aa18.13■□□□□ 0.49
RNF40-203ENST00000493683 H0Y8X5 98 aa18.13■□□□□ 0.49
RNF40-203ENST00000493683 COX7A2P2O60397 106 aa18.13■□□□□ 0.49
RNF40-203ENST00000493683 DSCR4P56555 118 aaPredicted RBP18.13■□□□□ 0.49
RNF40-203ENST00000493683 PLA1AQ53H76 456 aa18.13■□□□□ 0.49
RNF40-203ENST00000493683 DGAT2L6Q6ZPD8 337 aa18.13■□□□□ 0.49
RNF40-203ENST00000493683 C12orf57Q99622 126 aa18.13■□□□□ 0.49
RNF40-203ENST00000493683 SLIRPQ9GZT3 109 aaKnown RBP18.13■□□□□ 0.49
RNF40-203ENST00000493683 ATP23Q9Y6H3 246 aa18.13■□□□□ 0.49
RNF40-203ENST00000493683 COL16A1Q07092 1604 aaPredicted RBP18.13■□□□□ 0.49
RNF40-203ENST00000493683 ZNF320A2RRD8 509 aa18.13■□□□□ 0.49
RNF40-203ENST00000493683 RNASEK-C17orf49H0YIS7 233 aa18.13■□□□□ 0.49
RNF40-203ENST00000493683 CEACAM5P06731 702 aa18.13■□□□□ 0.49
RNF40-203ENST00000493683 SLC25A4P12235 298 aa18.13■□□□□ 0.49
RNF40-203ENST00000493683 AGERQ15109 404 aa18.13■□□□□ 0.49
RNF40-203ENST00000493683 DEGS2Q6QHC5 323 aa18.13■□□□□ 0.49
RNF40-203ENST00000493683 RSPO2Q6UXX9 243 aaPredicted RBP18.13■□□□□ 0.49
RNF40-203ENST00000493683 TJP1Q07157 1748 aa18.13■□□□□ 0.49
RNF40-203ENST00000493683 ZGLP1P0C6A0 271 aa18.13■□□□□ 0.49
RNF40-203ENST00000493683 GNB1P62873 340 aa18.13■□□□□ 0.49
RNF40-203ENST00000493683 INSM1Q01101 510 aaPredicted RBP18.13■□□□□ 0.49
RNF40-203ENST00000493683 KIAA1958Q8N8K9 716 aa18.13■□□□□ 0.49
RNF40-203ENST00000493683 OIT3Q8WWZ8 545 aa18.13■□□□□ 0.49
RNF40-203ENST00000493683 PRRX2Q99811 253 aa18.13■□□□□ 0.49
RNF40-203ENST00000493683 KLK11Q9UBX7 282 aa18.13■□□□□ 0.49
RNF40-203ENST00000493683 PI3P19957 117 aa18.13■□□□□ 0.49
RNF40-203ENST00000493683 FUT7Q11130 342 aa18.13■□□□□ 0.49
RNF40-203ENST00000493683 TIPARPQ7Z3E1 657 aaKnown RBP18.13■□□□□ 0.49
RNF40-203ENST00000493683 SPICQ8N5J4 248 aa18.13■□□□□ 0.49
RNF40-203ENST00000493683 ANKRD36CQ5JPF3 1778 aa18.12■□□□□ 0.49
RNF40-203ENST00000493683 PLPP2O43688 288 aa18.12■□□□□ 0.49
RNF40-203ENST00000493683 TOX4O94842 621 aa18.12■□□□□ 0.49
RNF40-203ENST00000493683 PPP1CBP62140 327 aa18.12■□□□□ 0.49
RNF40-203ENST00000493683 PHYHIPLQ96FC7 376 aa18.12■□□□□ 0.49
RNF40-203ENST00000493683 POM121L2Q96KW2 1035 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms