RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 CRYBA2P53672 197 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 SLC18A1P54219 525 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 AQP5P55064 265 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 ATP5J2P56134 94 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 BPIFB3P59826 476 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 KRTAP10-1P60331 282 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 DSTNP60981 165 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 LCN6P62502 163 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 MYBPC1Q00872 1141 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 EMX2Q04743 252 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 SCN1BQ07699 218 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 DMTNQ08495 405 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 C17orf67Q0P5P2 114 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 RASGEF1BQ0VAM2 473 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 CEACAM7Q14002 265 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 TRIP10Q15642 601 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 CARTPTQ16568 116 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 ZNF674Q2M3X9 581 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 PGGHGQ32M88 737 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 C2orf76Q3KRA6 126 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 ARHGAP11BQ3KRB8 267 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 SYT14P1Q58G82 188 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 ARMC4Q5T2S8 1044 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 LCE1CQ5T751 118 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 LCE1BQ5T7P3 118 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 BAIAP2L2Q6UXY1 529 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 SPNS3Q6ZMD2 512 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 BHLHA15Q7RTS1 189 aaPredicted RBP2.38□□□□□ -2.03
PTCD3-218ENST00000493430 UBE2J2Q8N2K1 259 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 MREGQ8N565 214 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 C10orf53Q8N6V4 93 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 LRRC17Q8N6Y2 441 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 ZIC4Q8N9L1 334 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 WDR31Q8NA23 367 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 FAM71CQ8NEG0 241 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 GPR32P1Q8NGA4 272 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 ZNF563Q8TA94 476 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 SFXN5Q8TD22 340 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 CCDC126Q96EE4 140 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 TSPAN32Q96QS1 320 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 OR52E6Q96RD3 313 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 PANX1Q96RD7 426 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 SECISBP2Q96T21 854 aaKnown RBP2.38□□□□□ -2.03
PTCD3-218ENST00000493430 FOXC2Q99958 501 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 CACNG6Q9BXT2 260 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 STMN4Q9H169 189 aaPredicted RBP2.38□□□□□ -2.03
PTCD3-218ENST00000493430 CXXC4Q9H2H0 198 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 MMP27Q9H306 513 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 TPK1Q9H3S4 243 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 MEAF6Q9HAF1 191 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 C3orf14Q9HBI5 128 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 UBQLN4Q9NRR5 601 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 NMRK1Q9NWW6 199 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 MED29Q9NX70 200 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 DCAF16Q9NXF7 216 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 TAS2R7Q9NYW3 318 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 TREM2Q9NZC2 230 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 CCDC167Q9P0B6 97 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 VAPAQ9P0L0 249 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 MYEF2Q9P2K5 600 aaKnown RBP2.38□□□□□ -2.03
PTCD3-218ENST00000493430 ZNF629Q9UEG4 869 aaPredicted RBP2.38□□□□□ -2.03
PTCD3-218ENST00000493430 ZNF346Q9UL40 294 aaKnown RBP2.38□□□□□ -2.03
PTCD3-218ENST00000493430 PSME2Q9UL46 239 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 ABCG2Q9UNQ0 655 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 MOKQ9UQ07 419 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 LIPT1Q9Y234 373 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 EIF3LQ9Y262 564 aaKnown RBP2.38□□□□□ -2.03
PTCD3-218ENST00000493430 ANGPT4Q9Y264 503 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 VSIG4Q9Y279 399 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 CFL2Q9Y281 166 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 ZNF443Q9Y2A4 671 aaPredicted RBP2.38□□□□□ -2.03
PTCD3-218ENST00000493430 SOX21Q9Y651 276 aaPredicted RBP2.38□□□□□ -2.03
PTCD3-218ENST00000493430 CACNG2Q9Y698 323 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 POMT1Q9Y6A1 747 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 USH1CQ9Y6N9 552 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 V9GYQ6 96 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 WNK1Q9H4A3 2382 aa2.38□□□□□ -2.03
PTCD3-218ENST00000493430 TET2Q6N021 2002 aaPredicted RBP2.37□□□□□ -2.03
PTCD3-218ENST00000493430 IGKV1D-43A0A0B4J1Z2 117 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 IGHV1-18A0A0C4DH31 117 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 IGHV3-64DA0A0J9YX35 117 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 A0A1B0GWA3 101 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 A0A1W2PQD3 144 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 SH3PXD2BA1X283 911 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 CCT8L1PA6NM43 557 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 CPSF4LA6NMK7 179 aaKnown RBP2.37□□□□□ -2.03
PTCD3-218ENST00000493430 FBP2O00757 339 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 PLXNB1O43157 2135 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 CYTIPO60759 359 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 SMPD2O60906 423 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 KRT33AO76009 404 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 DIRAS1O95057 198 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 LYPD3O95274 346 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 DANCRP0C864 163 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 PNMTP11086 282 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 PSKH1P11801 424 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 B4GALT1P15291 398 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 NCK1P16333 377 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 SELEP16581 610 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 ZNF17P17021 662 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms