RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 WDR82Q6UXN9 313 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 C12orf54Q6X4T0 127 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 ZNF782Q6ZMW2 699 aaPredicted RBP3.65□□□□□ -1.82
BRCA1-220ENST00000492859 SLC25A48Q6ZT89 311 aaKnown RBP3.65□□□□□ -1.82
BRCA1-220ENST00000492859 ASRGL1Q7L266 308 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 VRK3Q8IV63 474 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 PDZD9Q8IXQ8 264 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 ZADH2Q8N4Q0 377 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 EID2Q8N6I1 236 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 STPG3Q8N7X2 389 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 UBAC2Q8NBM4 344 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 ZNF439Q8NDP4 499 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 BEST4Q8NFU0 473 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 OR10G4Q8NGN3 311 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 OR5K2Q8NHB8 316 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 NEU4Q8WWR8 484 aaPredicted RBP3.65□□□□□ -1.82
BRCA1-220ENST00000492859 DYRK2Q92630 601 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 IL22RA2Q969J5 263 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 HIST1H2BAQ96A08 127 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 ROPN1LQ96C74 230 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 LIN37Q96GY3 246 aaPredicted RBP3.65□□□□□ -1.82
BRCA1-220ENST00000492859 PEX11GQ96HA9 241 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 Q96MF0 132 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 CMSS1Q9BQ75 279 aaKnown RBP3.65□□□□□ -1.82
BRCA1-220ENST00000492859 MAP1LC3BQ9GZQ8 125 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 MRPL18Q9H0U6 180 aaKnown RBP3.65□□□□□ -1.82
BRCA1-220ENST00000492859 MS4A6AQ9H2W1 248 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 METTL17Q9H7H0 456 aaPredicted RBP3.65□□□□□ -1.82
BRCA1-220ENST00000492859 CACYBPQ9HB71 228 aaKnown RBP3.65□□□□□ -1.82
BRCA1-220ENST00000492859 A4GALTQ9NPC4 353 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 ABHD10Q9NUJ1 306 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 FAM206AQ9NX38 181 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 THYN1Q9P016 225 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 RNF181Q9P0P0 153 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 MUTYHQ9UIF7 546 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 HSPB8Q9UJY1 196 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 TRAPPC4Q9Y296 219 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 RPL36Q9Y3U8 105 aaKnown RBP3.65□□□□□ -1.82
BRCA1-220ENST00000492859 U3KQ87 197 aa3.65□□□□□ -1.82
BRCA1-220ENST00000492859 METP08581 1390 aa3.65□□□□□ -1.83
BRCA1-220ENST00000492859 PALLDQ8WX93 1383 aa3.65□□□□□ -1.83
BRCA1-220ENST00000492859 ABCC12Q96J65 1359 aa3.65□□□□□ -1.83
BRCA1-220ENST00000492859 SCAF11Q99590 1463 aaKnown RBP3.65□□□□□ -1.83
BRCA1-220ENST00000492859 IGSF9BQ9UPX0 1349 aa3.65□□□□□ -1.83
BRCA1-220ENST00000492859 ADAMTS12P58397 1594 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 TNS3Q68CZ2 1445 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 A0A0G2JN53 185 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 TSPAN11A1L157 253 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 COPEO14579 308 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 GALR3O60755 368 aaPredicted RBP3.64□□□□□ -1.83
BRCA1-220ENST00000492859 RDH16O75452 317 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 MMP23AO75900 390 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 TRAPPC2P0DI81 140 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 TRAPPC2BP0DI82 140 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 OR5H8P0DN80 308 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 CD79AP11912 226 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 HSD17B1P14061 328 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 SDC1P18827 310 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 GPX3P22352 226 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 SLC2A5P22732 501 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 KDELR1P24390 212 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 HTR1DP28221 377 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 HOXD3P31249 432 aaPredicted RBP3.64□□□□□ -1.83
BRCA1-220ENST00000492859 APOBEC1P41238 236 aaKnown RBP3.64□□□□□ -1.83
BRCA1-220ENST00000492859 GLIPR1P48060 266 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 RAB5BP61020 215 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 ARG2P78540 354 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 FMODQ06828 376 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 PLCXD2Q0VAA5 305 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 MFAP5Q13361 173 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 EIF2B1Q14232 305 aaKnown RBP3.64□□□□□ -1.83
BRCA1-220ENST00000492859 FCN2Q15485 313 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 SNRNP35Q16560 246 aaKnown RBP3.64□□□□□ -1.83
BRCA1-220ENST00000492859 HIST3H3Q16695 136 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 SCGB2B2Q4G0G5 96 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 CCSMST1Q4G0I0 132 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 TRMT12Q53H54 448 aaKnown RBP3.64□□□□□ -1.83
BRCA1-220ENST00000492859 FAM162BQ5T6X4 162 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 LAMTOR1Q6IAA8 161 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 ANKRD54Q6NXT1 300 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 DCUN1D2Q6PH85 259 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 Q6ZS46 218 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 FA2HQ7L5A8 372 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 STRADAQ7RTN6 431 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 KRTAP19-1Q8IUB9 90 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 UBALD2Q8IYN6 164 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 UMODL1-AS1Q8N2C9 162 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 OSR2Q8N2R0 312 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 TMEM130Q8N3G9 435 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 TMEM86BQ8N661 226 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 TPRX1Q8N7U7 411 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 WDR31Q8NA23 367 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 CHST4Q8NCG5 386 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 OR1S2Q8NGQ3 325 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 OR6F1Q8NGZ6 308 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 OR5K1Q8NHB7 308 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 RPLP0P6Q8NHW5 317 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 ZFAND1Q8TCF1 268 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 CANT1Q8WVQ1 401 aa3.64□□□□□ -1.83
BRCA1-220ENST00000492859 CLDN23Q96B33 292 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms