RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 GATAD2BQ8WXI9 593 aa10.36□□□□□ -0.75
COL6A1-205ENST00000492851 C1orf147Q96MC9 270 aaPredicted RBP10.36□□□□□ -0.75
COL6A1-205ENST00000492851 DUX5Q96PT3 197 aa10.36□□□□□ -0.75
COL6A1-205ENST00000492851 INTS14Q96SY0 518 aa10.36□□□□□ -0.75
COL6A1-205ENST00000492851 TEX12Q9BXU0 123 aa10.36□□□□□ -0.75
COL6A1-205ENST00000492851 OR10A2Q9H208 303 aa10.36□□□□□ -0.75
COL6A1-205ENST00000492851 ABCB9Q9NP78 766 aa10.36□□□□□ -0.75
COL6A1-205ENST00000492851 KAAG1Q9UBP8 84 aa10.36□□□□□ -0.75
COL6A1-205ENST00000492851 U3KQV3 271 aa10.36□□□□□ -0.75
COL6A1-205ENST00000492851 IGHV3OR16-10A0A075B7F0 116 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 hCG_1807616A0A1W2PRN6 198 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 DHRS12A0PJE2 317 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 ARRDC5A6NEK1 342 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 C3orf80F5H4A9 247 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 TMPRSS2O15393 492 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 TBX1O43435 398 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 GLCEO94923 617 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 HMGN1P05114 100 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 GYPBP06028 91 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 ATP6V1B2P21281 511 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 GNALP38405 381 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 CX3CR1P49238 355 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 RPL15P61313 204 aaKnown RBP10.35□□□□□ -0.75
COL6A1-205ENST00000492851 FAM3AP98173 230 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 IL5RAQ01344 420 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 DBPQ10586 325 aaPredicted RBP10.35□□□□□ -0.75
COL6A1-205ENST00000492851 TEX36Q5VZQ5 186 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 Q6YL49 198 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 SLC16A9Q7RTY1 509 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 SLC36A1Q7Z2H8 476 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 ZNF454Q8N9F8 522 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 OR10G2Q8NGC3 310 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 OR56B2PQ8NGI1 322 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 OR4Q3Q8NH05 313 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 TBC1D15Q8TC07 691 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 GIPC3Q8TF64 312 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 RNF133Q8WVZ7 376 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 SGK3Q96BR1 496 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 C12orf43Q96C57 262 aaKnown RBP10.35□□□□□ -0.75
COL6A1-205ENST00000492851 ASB9Q96DX5 294 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 REEP6Q96HR9 211 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 WDFY2Q96P53 400 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 CCT8L2Q96SF2 557 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 MICU1Q9BPX6 476 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 PCGF1Q9BSM1 259 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 C1orf21Q9H246 121 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 UNKLQ9H9P5 680 aaKnown RBP10.35□□□□□ -0.75
COL6A1-205ENST00000492851 ZNF556Q9HAH1 456 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 ARMC1Q9NVT9 282 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 ZNF391Q9UJN7 358 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 MMP24Q9Y5R2 645 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 POMT1Q9Y6A1 747 aa10.35□□□□□ -0.75
COL6A1-205ENST00000492851 ANXA2P2A6NMY6 339 aa10.34□□□□□ -0.75
COL6A1-205ENST00000492851 C22orf46C9J442 243 aa10.34□□□□□ -0.75
COL6A1-205ENST00000492851 GNGT2O14610 69 aa10.34□□□□□ -0.75
COL6A1-205ENST00000492851 HOXA3O43365 443 aaPredicted RBP10.34□□□□□ -0.75
COL6A1-205ENST00000492851 SOX14O95416 240 aa10.34□□□□□ -0.75
COL6A1-205ENST00000492851 CST1P01037 141 aa10.34□□□□□ -0.75
COL6A1-205ENST00000492851 H2BFMP0C1H6 154 aa10.34□□□□□ -0.75
COL6A1-205ENST00000492851 SLC2A1P11166 492 aa10.34□□□□□ -0.75
COL6A1-205ENST00000492851 CFHR2P36980 270 aa10.34□□□□□ -0.75
COL6A1-205ENST00000492851 DEFB112Q30KQ8 113 aa10.34□□□□□ -0.75
COL6A1-205ENST00000492851 LINC01590Q5TEZ4 76 aa10.34□□□□□ -0.75
COL6A1-205ENST00000492851 LYPD4Q6UWN0 246 aa10.34□□□□□ -0.75
COL6A1-205ENST00000492851 BRD3OSQ6XYD6 125 aa10.34□□□□□ -0.75
COL6A1-205ENST00000492851 DPY19L4Q7Z388 723 aa10.34□□□□□ -0.75
COL6A1-205ENST00000492851 ERI1Q8IV48 349 aaKnown RBP10.34□□□□□ -0.75
COL6A1-205ENST00000492851 GALNT4Q8N4A0 578 aa10.34□□□□□ -0.75
COL6A1-205ENST00000492851 GCSAMQ8N6F7 178 aa10.34□□□□□ -0.75
COL6A1-205ENST00000492851 C19orf18Q8NEA5 215 aa10.34□□□□□ -0.75
COL6A1-205ENST00000492851 OR6N2Q8NGY6 317 aa10.34□□□□□ -0.75
COL6A1-205ENST00000492851 OR4F5Q8NH21 305 aa10.34□□□□□ -0.75
COL6A1-205ENST00000492851 NPRL2Q8WTW4 380 aa10.34□□□□□ -0.75
COL6A1-205ENST00000492851 TMIGD2Q96BF3 282 aa10.34□□□□□ -0.75
COL6A1-205ENST00000492851 OTULINQ96BN8 352 aa10.34□□□□□ -0.75
COL6A1-205ENST00000492851 FEVQ99581 238 aa10.34□□□□□ -0.75
COL6A1-205ENST00000492851 ABHD6Q9BV23 337 aa10.34□□□□□ -0.75
COL6A1-205ENST00000492851 CHID1Q9BWS9 393 aa10.34□□□□□ -0.75
COL6A1-205ENST00000492851 NIPAL2Q9H841 368 aa10.34□□□□□ -0.75
COL6A1-205ENST00000492851 YY1AP1Q9H869 796 aa10.34□□□□□ -0.75
COL6A1-205ENST00000492851 CNTD2Q9H8S5 307 aa10.34□□□□□ -0.75
COL6A1-205ENST00000492851 MARCH7Q9H992 704 aa10.34□□□□□ -0.75
COL6A1-205ENST00000492851 BEX1Q9HBH7 125 aa10.34□□□□□ -0.75
COL6A1-205ENST00000492851 ACOXLQ9NUZ1 547 aa10.34□□□□□ -0.75
COL6A1-205ENST00000492851 MPC1Q9Y5U8 109 aa10.34□□□□□ -0.75
COL6A1-205ENST00000492851 AQP12BA6NM10 295 aa10.33□□□□□ -0.76
COL6A1-205ENST00000492851 PRR23D1E9PI22 279 aaPredicted RBP10.33□□□□□ -0.76
COL6A1-205ENST00000492851 DVL1O14640 695 aa10.33□□□□□ -0.76
COL6A1-205ENST00000492851 GYPAP02724 150 aa10.33□□□□□ -0.76
COL6A1-205ENST00000492851 LYNP07948 512 aa10.33□□□□□ -0.76
COL6A1-205ENST00000492851 PRR23D2P0DMB1 279 aaPredicted RBP10.33□□□□□ -0.76
COL6A1-205ENST00000492851 CLUP10909 449 aa10.33□□□□□ -0.76
COL6A1-205ENST00000492851 GSK3AP49840 483 aa10.33□□□□□ -0.76
COL6A1-205ENST00000492851 GYS2P54840 703 aa10.33□□□□□ -0.76
COL6A1-205ENST00000492851 MS4A2Q01362 244 aa10.33□□□□□ -0.76
COL6A1-205ENST00000492851 PPP1R8Q12972 351 aaKnown RBP10.33□□□□□ -0.76
COL6A1-205ENST00000492851 FAM57BQ71RH2 274 aa10.33□□□□□ -0.76
COL6A1-205ENST00000492851 SPATC1Q76KD6 591 aa10.33□□□□□ -0.76
COL6A1-205ENST00000492851 BTN2A1Q7KYR7 527 aa10.33□□□□□ -0.76
COL6A1-205ENST00000492851 FAM90A1Q86YD7 464 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms