RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 OR56B2PQ8NGI1 322 aa10.78□□□□□ -0.68
USF1-206ENST00000491629 C8orf46Q8TAG6 207 aa10.78□□□□□ -0.68
USF1-206ENST00000491629 ZNRF4Q8WWF5 429 aa10.78□□□□□ -0.68
USF1-206ENST00000491629 PHF21AQ96BD5 680 aa10.78□□□□□ -0.68
USF1-206ENST00000491629 ZNF799Q96GE5 643 aa10.78□□□□□ -0.68
USF1-206ENST00000491629 NMNAT3Q96T66 252 aa10.78□□□□□ -0.68
USF1-206ENST00000491629 DCTN5Q9BTE1 182 aa10.78□□□□□ -0.68
USF1-206ENST00000491629 MMP28Q9H239 520 aa10.78□□□□□ -0.68
USF1-206ENST00000491629 FN3KQ9H479 309 aa10.78□□□□□ -0.68
USF1-206ENST00000491629 NECAP2Q9NVZ3 263 aa10.78□□□□□ -0.68
USF1-206ENST00000491629 MRPL15Q9P015 296 aaKnown RBP10.78□□□□□ -0.68
USF1-206ENST00000491629 PRPF19Q9UMS4 504 aaKnown RBP10.78□□□□□ -0.68
USF1-206ENST00000491629 A0A0G2JND7 137 aa10.77□□□□□ -0.69
USF1-206ENST00000491629 hCG_1807616A0A1W2PRN6 198 aa10.77□□□□□ -0.69
USF1-206ENST00000491629 OR6C68A6NDL8 312 aa10.77□□□□□ -0.69
USF1-206ENST00000491629 A6NLC8 198 aa10.77□□□□□ -0.69
USF1-206ENST00000491629 CHST1O43916 411 aa10.77□□□□□ -0.69
USF1-206ENST00000491629 NPPAP01160 153 aa10.77□□□□□ -0.69
USF1-206ENST00000491629 IFNA8P32881 189 aa10.77□□□□□ -0.69
USF1-206ENST00000491629 RPS6KA3P51812 740 aa10.77□□□□□ -0.69
USF1-206ENST00000491629 TPTEP56180 551 aa10.77□□□□□ -0.69
USF1-206ENST00000491629 VAX1Q5SQQ9 334 aa10.77□□□□□ -0.69
USF1-206ENST00000491629 WDR82Q6UXN9 313 aa10.77□□□□□ -0.69
USF1-206ENST00000491629 BEND2Q8NDZ0 799 aa10.77□□□□□ -0.69
USF1-206ENST00000491629 BCAS4Q8TDM0 211 aa10.77□□□□□ -0.69
USF1-206ENST00000491629 WIPF2Q8TF74 440 aaPredicted RBP10.77□□□□□ -0.69
USF1-206ENST00000491629 LRRC29Q8WV35 223 aa10.77□□□□□ -0.69
USF1-206ENST00000491629 HSH2DQ96JZ2 352 aa10.77□□□□□ -0.69
USF1-206ENST00000491629 DMRTB1Q96MA1 342 aa10.77□□□□□ -0.69
USF1-206ENST00000491629 ERMAPQ96PL5 475 aaPredicted RBP10.77□□□□□ -0.69
USF1-206ENST00000491629 FUZQ9BT04 418 aa10.77□□□□□ -0.69
USF1-206ENST00000491629 ANKRD19PQ9H560 264 aa10.77□□□□□ -0.69
USF1-206ENST00000491629 RPRD1BQ9NQG5 326 aaKnown RBP10.77□□□□□ -0.69
USF1-206ENST00000491629 TMEM5Q9Y2B1 443 aa10.77□□□□□ -0.69
USF1-206ENST00000491629 CAB39Q9Y376 341 aaPredicted RBP10.77□□□□□ -0.69
USF1-206ENST00000491629 MAB21L2Q9Y586 359 aa10.77□□□□□ -0.69
USF1-206ENST00000491629 TRBV4-1A0A0J9YWV2 114 aa10.76□□□□□ -0.69
USF1-206ENST00000491629 GGT3PA6NGU5 568 aa10.76□□□□□ -0.69
USF1-206ENST00000491629 UNC119BA6NIH7 251 aa10.76□□□□□ -0.69
USF1-206ENST00000491629 BHLHE40O14503 412 aa10.76□□□□□ -0.69
USF1-206ENST00000491629 EDF1O60869 148 aaKnown RBP10.76□□□□□ -0.69
USF1-206ENST00000491629 ZNF682O95780 498 aa10.76□□□□□ -0.69
USF1-206ENST00000491629 CD28P10747 220 aa10.76□□□□□ -0.69
USF1-206ENST00000491629 MUC1P15941 1255 aaPredicted RBP10.76□□□□□ -0.69
USF1-206ENST00000491629 HIST1H1CP16403 213 aaKnown RBP10.76□□□□□ -0.69
USF1-206ENST00000491629 UBE2E1P51965 193 aa10.76□□□□□ -0.69
USF1-206ENST00000491629 GUCA2AQ02747 115 aa10.76□□□□□ -0.69
USF1-206ENST00000491629 KLF10Q13118 480 aa10.76□□□□□ -0.69
USF1-206ENST00000491629 IKZF1Q13422 519 aa10.76□□□□□ -0.69
USF1-206ENST00000491629 NSUN5P1Q3KNT7 163 aa10.76□□□□□ -0.69
USF1-206ENST00000491629 IFI44LQ53G44 452 aa10.76□□□□□ -0.69
USF1-206ENST00000491629 FOXB2Q5VYV0 432 aa10.76□□□□□ -0.69
USF1-206ENST00000491629 METTL21CQ5VZV1 264 aa10.76□□□□□ -0.69
USF1-206ENST00000491629 LYPD4Q6UWN0 246 aa10.76□□□□□ -0.69
USF1-206ENST00000491629 LNX2Q8N448 690 aa10.76□□□□□ -0.69
USF1-206ENST00000491629 OR5T2Q8NGG2 359 aa10.76□□□□□ -0.69
USF1-206ENST00000491629 OR4K13Q8NH42 304 aa10.76□□□□□ -0.69
USF1-206ENST00000491629 PIFOQ8TCI5 191 aa10.76□□□□□ -0.69
USF1-206ENST00000491629 LZICQ8WZA0 190 aa10.76□□□□□ -0.69
USF1-206ENST00000491629 SGCDQ92629 289 aa10.76□□□□□ -0.69
USF1-206ENST00000491629 SSX3Q99909 188 aa10.76□□□□□ -0.69
USF1-206ENST00000491629 TMEM120AQ9BXJ8 343 aa10.76□□□□□ -0.69
USF1-206ENST00000491629 NOP16Q9Y3C1 178 aaKnown RBP10.76□□□□□ -0.69
USF1-206ENST00000491629 ENPP4Q9Y6X5 453 aa10.76□□□□□ -0.69
USF1-206ENST00000491629 A0A1W2PRQ8 180 aa10.75□□□□□ -0.69
USF1-206ENST00000491629 ANKRD65E5RJM6 399 aa10.75□□□□□ -0.69
USF1-206ENST00000491629 K7EIL1 84 aa10.75□□□□□ -0.69
USF1-206ENST00000491629 CXCR6O00574 342 aa10.75□□□□□ -0.69
USF1-206ENST00000491629 PAHP00439 452 aa10.75□□□□□ -0.69
USF1-206ENST00000491629 VSIG10L2P0DP72 767 aa10.75□□□□□ -0.69
USF1-206ENST00000491629 SLC2A1P11166 492 aa10.75□□□□□ -0.69
USF1-206ENST00000491629 EEF1B2P24534 225 aaKnown RBP10.75□□□□□ -0.69
USF1-206ENST00000491629 DGCR6Q14129 220 aa10.75□□□□□ -0.69
USF1-206ENST00000491629 HABP2Q14520 560 aaPredicted RBP10.75□□□□□ -0.69
USF1-206ENST00000491629 MICBQ29980 383 aa10.75□□□□□ -0.69
USF1-206ENST00000491629 ATPAF1Q5TC12 328 aaPredicted RBP10.75□□□□□ -0.69
USF1-206ENST00000491629 STUMQ69YW2 141 aa10.75□□□□□ -0.69
USF1-206ENST00000491629 DNM1P34Q6PK57 102 aa10.75□□□□□ -0.69
USF1-206ENST00000491629 SMARCD3Q6STE5 483 aa10.75□□□□□ -0.69
USF1-206ENST00000491629 RRM2BQ7LG56 351 aa10.75□□□□□ -0.69
USF1-206ENST00000491629 SLC15A3Q8IY34 581 aa10.75□□□□□ -0.69
USF1-206ENST00000491629 SPERTQ8NA61 448 aa10.75□□□□□ -0.69
USF1-206ENST00000491629 OR2AJ1Q8NGZ0 328 aa10.75□□□□□ -0.69
USF1-206ENST00000491629 WDR13Q9H1Z4 485 aa10.75□□□□□ -0.69
USF1-206ENST00000491629 RNPEPL1Q9HAU8 725 aa10.75□□□□□ -0.69
USF1-206ENST00000491629 SERTAD4Q9NUC0 356 aa10.75□□□□□ -0.69
USF1-206ENST00000491629 AURKCQ9UQB9 309 aa10.75□□□□□ -0.69
USF1-206ENST00000491629 LOC100653049A0A140TA62 436 aa10.74□□□□□ -0.69
USF1-206ENST00000491629 ARPC3O15145 178 aa10.74□□□□□ -0.69
USF1-206ENST00000491629 NDUFB3O43676 98 aa10.74□□□□□ -0.69
USF1-206ENST00000491629 KRT34O76011 436 aa10.74□□□□□ -0.69
USF1-206ENST00000491629 DIRAS1O95057 198 aa10.74□□□□□ -0.69
USF1-206ENST00000491629 SERPINA1P01009 418 aa10.74□□□□□ -0.69
USF1-206ENST00000491629 H1F0P07305 194 aaKnown RBP10.74□□□□□ -0.69
USF1-206ENST00000491629 DGUOKQ16854 277 aa10.74□□□□□ -0.69
USF1-206ENST00000491629 SLC36A3Q495N2 470 aa10.74□□□□□ -0.69
USF1-206ENST00000491629 KLHL12Q53G59 568 aa10.74□□□□□ -0.69
USF1-206ENST00000491629 CMTM4Q8IZR5 234 aa10.74□□□□□ -0.69
USF1-206ENST00000491629 SDR9C7Q8NEX9 313 aa10.74□□□□□ -0.69
USF1-206ENST00000491629 OR1M1Q8NGA1 313 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms