RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 NUP37Q8NFH4 326 aa18.69■□□□□ 0.58
VCPKMT-204ENST00000491402 RAB2BQ8WUD1 216 aa18.69■□□□□ 0.58
VCPKMT-204ENST00000491402 ISOC1Q96CN7 298 aa18.69■□□□□ 0.58
VCPKMT-204ENST00000491402 MARS2Q96GW9 593 aaKnown RBP18.69■□□□□ 0.58
VCPKMT-204ENST00000491402 DERL3Q96Q80 235 aa18.69■□□□□ 0.58
VCPKMT-204ENST00000491402 ZNF275Q9NSD4 429 aaPredicted RBP18.69■□□□□ 0.58
VCPKMT-204ENST00000491402 V9GYS6 101 aa18.69■□□□□ 0.58
VCPKMT-204ENST00000491402 CCDC160A6NGH7 325 aa18.68■□□□□ 0.58
VCPKMT-204ENST00000491402 A6NHS1 94 aa18.68■□□□□ 0.58
VCPKMT-204ENST00000491402 COX6B1P14854 86 aa18.68■□□□□ 0.58
VCPKMT-204ENST00000491402 TUBG1P23258 451 aa18.68■□□□□ 0.58
VCPKMT-204ENST00000491402 ACKR3P25106 362 aa18.68■□□□□ 0.58
VCPKMT-204ENST00000491402 MAPK3P27361 379 aaPredicted RBP18.68■□□□□ 0.58
VCPKMT-204ENST00000491402 GLRXP35754 106 aa18.68■□□□□ 0.58
VCPKMT-204ENST00000491402 GSK3AP49840 483 aa18.68■□□□□ 0.58
VCPKMT-204ENST00000491402 TNK1Q13470 666 aa18.68■□□□□ 0.58
VCPKMT-204ENST00000491402 CCDC54Q8NEL0 328 aa18.68■□□□□ 0.58
VCPKMT-204ENST00000491402 ZNF420Q8TAQ5 688 aaPredicted RBP18.68■□□□□ 0.58
VCPKMT-204ENST00000491402 KLF14Q8TD94 323 aaPredicted RBP18.68■□□□□ 0.58
VCPKMT-204ENST00000491402 FAM222BQ8WU58 562 aa18.68■□□□□ 0.58
VCPKMT-204ENST00000491402 THRSPQ92748 146 aa18.68■□□□□ 0.58
VCPKMT-204ENST00000491402 PPIL3Q9H2H8 161 aaKnown RBP18.68■□□□□ 0.58
VCPKMT-204ENST00000491402 RNF167Q9H6Y7 350 aa18.68■□□□□ 0.58
VCPKMT-204ENST00000491402 PLEKHA1Q9HB21 404 aa18.68■□□□□ 0.58
VCPKMT-204ENST00000491402 TUBG2Q9NRH3 451 aa18.68■□□□□ 0.58
VCPKMT-204ENST00000491402 NDUFA13Q9P0J0 144 aa18.68■□□□□ 0.58
VCPKMT-204ENST00000491402 DCHS2Q6V1P9 2916 aa18.68■□□□□ 0.58
VCPKMT-204ENST00000491402 A0A1W2PPK0 400 aa18.68■□□□□ 0.58
VCPKMT-204ENST00000491402 CD2P06729 351 aa18.68■□□□□ 0.58
VCPKMT-204ENST00000491402 CD3EP07766 207 aa18.68■□□□□ 0.58
VCPKMT-204ENST00000491402 FOXB2Q5VYV0 432 aa18.68■□□□□ 0.58
VCPKMT-204ENST00000491402 ROS1P08922 2347 aa18.67■□□□□ 0.58
VCPKMT-204ENST00000491402 A6NIN4 97 aa18.67■□□□□ 0.58
VCPKMT-204ENST00000491402 DHRS7CA6NNS2 312 aa18.67■□□□□ 0.58
VCPKMT-204ENST00000491402 SHISA9B4DS77 424 aa18.67■□□□□ 0.58
VCPKMT-204ENST00000491402 UCHL1P09936 223 aa18.67■□□□□ 0.58
VCPKMT-204ENST00000491402 RGS7BPQ6MZT1 257 aaPredicted RBP18.67■□□□□ 0.58
VCPKMT-204ENST00000491402 PAMR1Q6UXH9 720 aa18.67■□□□□ 0.58
VCPKMT-204ENST00000491402 SEMA6DQ8NFY4 1073 aa18.67■□□□□ 0.58
VCPKMT-204ENST00000491402 ORAI1Q96D31 301 aa18.67■□□□□ 0.58
VCPKMT-204ENST00000491402 ADAT3Q96EY9 351 aaPredicted RBP18.67■□□□□ 0.58
VCPKMT-204ENST00000491402 NOX4Q9NPH5 578 aa18.67■□□□□ 0.58
VCPKMT-204ENST00000491402 PIGLQ9Y2B2 252 aa18.67■□□□□ 0.58
VCPKMT-204ENST00000491402 GSTK1Q9Y2Q3 226 aa18.67■□□□□ 0.58
VCPKMT-204ENST00000491402 CELSR2Q9HCU4 2923 aa18.67■□□□□ 0.58
VCPKMT-204ENST00000491402 ABCA4P78363 2273 aa18.67■□□□□ 0.58
VCPKMT-204ENST00000491402 TRBV5-7A0A0A0MS05 114 aa18.66■□□□□ 0.58
VCPKMT-204ENST00000491402 PIN1P1O15428 100 aa18.66■□□□□ 0.58
VCPKMT-204ENST00000491402 NOL3O60936 208 aaKnown RBP18.66■□□□□ 0.58
VCPKMT-204ENST00000491402 RAC2P15153 192 aa18.66■□□□□ 0.58
VCPKMT-204ENST00000491402 MAP2K3P46734 347 aa18.66■□□□□ 0.58
VCPKMT-204ENST00000491402 VBP1P61758 197 aa18.66■□□□□ 0.58
VCPKMT-204ENST00000491402 NCS1P62166 190 aa18.66■□□□□ 0.58
VCPKMT-204ENST00000491402 RPS23P62266 143 aaKnown RBP18.66■□□□□ 0.58
VCPKMT-204ENST00000491402 VHLLQ6RSH7 139 aa18.66■□□□□ 0.58
VCPKMT-204ENST00000491402 PARP16Q8N5Y8 322 aa18.66■□□□□ 0.58
VCPKMT-204ENST00000491402 KBTBD8Q8NFY9 601 aa18.66■□□□□ 0.58
VCPKMT-204ENST00000491402 OR56B2PQ8NGI1 322 aa18.66■□□□□ 0.58
VCPKMT-204ENST00000491402 TMEM171Q8WVE6 324 aa18.66■□□□□ 0.58
VCPKMT-204ENST00000491402 PHYHIPQ92561 330 aa18.66■□□□□ 0.58
VCPKMT-204ENST00000491402 FGGYQ96C11 551 aa18.66■□□□□ 0.58
VCPKMT-204ENST00000491402 CMBLQ96DG6 245 aa18.66■□□□□ 0.58
VCPKMT-204ENST00000491402 PIK3IP1Q96FE7 263 aa18.66■□□□□ 0.58
VCPKMT-204ENST00000491402 HS3ST6Q96QI5 342 aa18.66■□□□□ 0.58
VCPKMT-204ENST00000491402 CA10Q9NS85 328 aa18.66■□□□□ 0.58
VCPKMT-204ENST00000491402 POU2F3Q9UKI9 436 aa18.66■□□□□ 0.58
VCPKMT-204ENST00000491402 RNF115Q9Y4L5 304 aa18.66■□□□□ 0.58
VCPKMT-204ENST00000491402 RAF1P04049 648 aa18.65■□□□□ 0.58
VCPKMT-204ENST00000491402 FAHP16930 419 aa18.65■□□□□ 0.58
VCPKMT-204ENST00000491402 CALRP27797 417 aaKnown RBP18.65■□□□□ 0.58
VCPKMT-204ENST00000491402 LOXP28300 417 aaPredicted RBP18.65■□□□□ 0.58
VCPKMT-204ENST00000491402 TGFBR1P36897 503 aa18.65■□□□□ 0.58
VCPKMT-204ENST00000491402 MPV17P39210 176 aa18.65■□□□□ 0.58
VCPKMT-204ENST00000491402 RIPPLY1Q0D2K3 151 aa18.65■□□□□ 0.58
VCPKMT-204ENST00000491402 ZNF718Q3SXZ3 478 aa18.65■□□□□ 0.58
VCPKMT-204ENST00000491402 MBNL2Q5VZF2 373 aaKnown RBP18.65■□□□□ 0.58
VCPKMT-204ENST00000491402 C10orf35Q96D05 121 aa18.65■□□□□ 0.58
VCPKMT-204ENST00000491402 BCL7BQ9BQE9 202 aa18.65■□□□□ 0.58
VCPKMT-204ENST00000491402 RSL24D1Q9UHA3 163 aaKnown RBP18.65■□□□□ 0.58
VCPKMT-204ENST00000491402 FZR1Q9UM11 496 aa18.65■□□□□ 0.58
VCPKMT-204ENST00000491402 GGT3PA6NGU5 568 aa18.65■□□□□ 0.58
VCPKMT-204ENST00000491402 H3BMQ9 156 aa18.65■□□□□ 0.58
VCPKMT-204ENST00000491402 ARL6IP5O75915 188 aa18.65■□□□□ 0.58
VCPKMT-204ENST00000491402 ZNF20P17024 532 aa18.65■□□□□ 0.58
VCPKMT-204ENST00000491402 THBS4P35443 961 aa18.65■□□□□ 0.58
VCPKMT-204ENST00000491402 FABP6P51161 128 aa18.65■□□□□ 0.58
VCPKMT-204ENST00000491402 PSG7Q13046 419 aa18.65■□□□□ 0.58
VCPKMT-204ENST00000491402 MSMPQ1L6U9 139 aa18.65■□□□□ 0.58
VCPKMT-204ENST00000491402 HSD17B12Q53GQ0 312 aa18.65■□□□□ 0.58
VCPKMT-204ENST00000491402 ASPHD2Q6ICH7 369 aa18.65■□□□□ 0.58
VCPKMT-204ENST00000491402 HAVCR1Q96D42 359 aa18.65■□□□□ 0.58
VCPKMT-204ENST00000491402 KCTD7Q96MP8 289 aa18.65■□□□□ 0.58
VCPKMT-204ENST00000491402 KCNN3Q9UGI6 736 aa18.65■□□□□ 0.58
VCPKMT-204ENST00000491402 ATP23Q9Y6H3 246 aa18.65■□□□□ 0.58
VCPKMT-204ENST00000491402 ANKRD61A6NGH8 418 aa18.64■□□□□ 0.57
VCPKMT-204ENST00000491402 CD300LBA8K4G0 201 aa18.64■□□□□ 0.57
VCPKMT-204ENST00000491402 GCH1P30793 250 aa18.64■□□□□ 0.57
VCPKMT-204ENST00000491402 TMEM255AQ5JRV8 349 aa18.64■□□□□ 0.57
VCPKMT-204ENST00000491402 OR2T2Q6IF00 324 aa18.64■□□□□ 0.57
VCPKMT-204ENST00000491402 SERPINA12Q8IW75 414 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms