RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 HTR2CP28335 458 aa12.07□□□□□ -0.48
SMPD4-219ENST00000491128 TALDO1P37837 337 aa12.07□□□□□ -0.48
SMPD4-219ENST00000491128 DDOSTP39656 456 aa12.07□□□□□ -0.48
SMPD4-219ENST00000491128 UCNP55089 124 aa12.07□□□□□ -0.48
SMPD4-219ENST00000491128 RAB11BQ15907 218 aa12.07□□□□□ -0.48
SMPD4-219ENST00000491128 KRTCAP3Q53RY4 240 aa12.07□□□□□ -0.48
SMPD4-219ENST00000491128 XKRXQ6PP77 449 aa12.07□□□□□ -0.48
SMPD4-219ENST00000491128 ZNF627Q7L945 461 aa12.07□□□□□ -0.48
SMPD4-219ENST00000491128 BATF2Q8N1L9 274 aa12.07□□□□□ -0.48
SMPD4-219ENST00000491128 MBD3L2Q8NHZ7 208 aaPredicted RBP12.07□□□□□ -0.48
SMPD4-219ENST00000491128 SOSTQ9BQB4 213 aa12.07□□□□□ -0.48
SMPD4-219ENST00000491128 ZMAT3Q9HA38 289 aaKnown RBP12.07□□□□□ -0.48
SMPD4-219ENST00000491128 TBC1D24Q9ULP9 559 aa12.07□□□□□ -0.48
SMPD4-219ENST00000491128 PROCRQ9UNN8 238 aa12.07□□□□□ -0.48
SMPD4-219ENST00000491128 STARD10Q9Y365 291 aa12.07□□□□□ -0.48
SMPD4-219ENST00000491128 A0A1W2PP11 408 aa12.07□□□□□ -0.48
SMPD4-219ENST00000491128 CD3GP09693 182 aa12.07□□□□□ -0.48
SMPD4-219ENST00000491128 FAM157BP0CG42 384 aa12.07□□□□□ -0.48
SMPD4-219ENST00000491128 FSTP19883 344 aa12.07□□□□□ -0.48
SMPD4-219ENST00000491128 OR3A4PP47883 348 aa12.07□□□□□ -0.48
SMPD4-219ENST00000491128 SRP9P49458 86 aaKnown RBP12.07□□□□□ -0.48
SMPD4-219ENST00000491128 ECH1Q13011 328 aa12.07□□□□□ -0.48
SMPD4-219ENST00000491128 GABRA6Q16445 453 aa12.07□□□□□ -0.48
SMPD4-219ENST00000491128 GLT8D1Q68CQ7 371 aa12.07□□□□□ -0.48
SMPD4-219ENST00000491128 DCDC5Q6ZRR9 648 aa12.07□□□□□ -0.48
SMPD4-219ENST00000491128 RTN4RL2Q86UN3 420 aa12.07□□□□□ -0.48
SMPD4-219ENST00000491128 SLC25A28Q96A46 364 aa12.07□□□□□ -0.48
SMPD4-219ENST00000491128 GP6Q9HCN6 339 aa12.07□□□□□ -0.48
SMPD4-219ENST00000491128 COL12A1Q99715 3063 aa12.06□□□□□ -0.48
SMPD4-219ENST00000491128 A0A0U1RQV5 110 aa12.06□□□□□ -0.48
SMPD4-219ENST00000491128 SLC17A2O00624 439 aa12.06□□□□□ -0.48
SMPD4-219ENST00000491128 EEF1E1O43324 174 aaKnown RBP12.06□□□□□ -0.48
SMPD4-219ENST00000491128 CGAP01215 116 aa12.06□□□□□ -0.48
SMPD4-219ENST00000491128 IGLV3-1P01715 115 aa12.06□□□□□ -0.48
SMPD4-219ENST00000491128 ARSBP15848 533 aa12.06□□□□□ -0.48
SMPD4-219ENST00000491128 CCL1P22362 96 aa12.06□□□□□ -0.48
SMPD4-219ENST00000491128 CDK2P24941 298 aa12.06□□□□□ -0.48
SMPD4-219ENST00000491128 WNT5AP41221 380 aa12.06□□□□□ -0.48
SMPD4-219ENST00000491128 PITPNBP48739 271 aa12.06□□□□□ -0.48
SMPD4-219ENST00000491128 UBE2NP61088 152 aaKnown RBP12.06□□□□□ -0.48
SMPD4-219ENST00000491128 ERVS71-1P61550 626 aa12.06□□□□□ -0.48
SMPD4-219ENST00000491128 PLP2Q04941 152 aa12.06□□□□□ -0.48
SMPD4-219ENST00000491128 KRTAP27-1Q3LI81 207 aa12.06□□□□□ -0.48
SMPD4-219ENST00000491128 OR2A2Q6IF42 318 aa12.06□□□□□ -0.48
SMPD4-219ENST00000491128 ZNF474Q6S9Z5 364 aaPredicted RBP12.06□□□□□ -0.48
SMPD4-219ENST00000491128 GABRG1Q8N1C3 465 aa12.06□□□□□ -0.48
SMPD4-219ENST00000491128 OR52H1Q8NGJ2 320 aa12.06□□□□□ -0.48
SMPD4-219ENST00000491128 OR6K3Q8NGY3 331 aa12.06□□□□□ -0.48
SMPD4-219ENST00000491128 POM121L2Q96KW2 1035 aa12.06□□□□□ -0.48
SMPD4-219ENST00000491128 AUNIPQ9H7T9 357 aa12.06□□□□□ -0.48
SMPD4-219ENST00000491128 TMEM138Q9NPI0 162 aa12.06□□□□□ -0.48
SMPD4-219ENST00000491128 PTTG3PQ9NZH4 202 aa12.06□□□□□ -0.48
SMPD4-219ENST00000491128 MRPL15Q9P015 296 aaKnown RBP12.06□□□□□ -0.48
SMPD4-219ENST00000491128 TMEM272A0A1B0GTI8 110 aa12.06□□□□□ -0.48
SMPD4-219ENST00000491128 EEF1E1-BLOC1S5C9J1V9 151 aa12.06□□□□□ -0.48
SMPD4-219ENST00000491128 SULT1B1O43704 296 aa12.06□□□□□ -0.48
SMPD4-219ENST00000491128 ZNF93P35789 620 aaPredicted RBP12.06□□□□□ -0.48
SMPD4-219ENST00000491128 DGCR2P98153 550 aa12.06□□□□□ -0.48
SMPD4-219ENST00000491128 FAM3AP98173 230 aa12.06□□□□□ -0.48
SMPD4-219ENST00000491128 TRIM16LQ309B1 348 aa12.06□□□□□ -0.48
SMPD4-219ENST00000491128 NRN1LQ496H8 165 aa12.06□□□□□ -0.48
SMPD4-219ENST00000491128 UBE2NLQ5JXB2 153 aa12.06□□□□□ -0.48
SMPD4-219ENST00000491128 C1QL2Q7Z5L3 287 aa12.06□□□□□ -0.48
SMPD4-219ENST00000491128 GLCCI1Q86VQ1 547 aa12.06□□□□□ -0.48
SMPD4-219ENST00000491128 WACQ9BTA9 647 aa12.06□□□□□ -0.48
SMPD4-219ENST00000491128 PLSCR4Q9NRQ2 329 aa12.06□□□□□ -0.48
SMPD4-219ENST00000491128 ADAM30Q9UKF2 790 aa12.06□□□□□ -0.48
SMPD4-219ENST00000491128 ELF5Q9UKW6 265 aaPredicted RBP12.06□□□□□ -0.48
SMPD4-219ENST00000491128 MYO7BQ6PIF6 2116 aa12.05□□□□□ -0.48
SMPD4-219ENST00000491128 APOA1P02647 267 aa12.05□□□□□ -0.48
SMPD4-219ENST00000491128 GLI4P10075 376 aa12.05□□□□□ -0.48
SMPD4-219ENST00000491128 CALCBP10092 127 aa12.05□□□□□ -0.48
SMPD4-219ENST00000491128 GABRA1P14867 456 aa12.05□□□□□ -0.48
SMPD4-219ENST00000491128 GSK3AP49840 483 aa12.05□□□□□ -0.48
SMPD4-219ENST00000491128 GK2Q14410 553 aaPredicted RBP12.05□□□□□ -0.48
SMPD4-219ENST00000491128 ZNF181Q2M3W8 571 aa12.05□□□□□ -0.48
SMPD4-219ENST00000491128 ANGPTL5Q86XS5 388 aa12.05□□□□□ -0.48
SMPD4-219ENST00000491128 SLC30A7Q8NEW0 376 aa12.05□□□□□ -0.48
SMPD4-219ENST00000491128 SEMA6DQ8NFY4 1073 aa12.05□□□□□ -0.48
SMPD4-219ENST00000491128 OR10K1Q8NGX5 313 aa12.05□□□□□ -0.48
SMPD4-219ENST00000491128 GPER1Q99527 375 aa12.05□□□□□ -0.48
SMPD4-219ENST00000491128 PALMDQ9NP74 551 aa12.05□□□□□ -0.48
SMPD4-219ENST00000491128 V9GYS6 101 aa12.05□□□□□ -0.48
SMPD4-219ENST00000491128 FAM230AA0A1W2PPH8 454 aa12.05□□□□□ -0.48
SMPD4-219ENST00000491128 MEIS3P1A6NDR6 274 aa12.05□□□□□ -0.48
SMPD4-219ENST00000491128 PRRG2O14669 202 aa12.05□□□□□ -0.48
SMPD4-219ENST00000491128 WDR1O75083 606 aa12.05□□□□□ -0.48
SMPD4-219ENST00000491128 APOC1P02654 83 aa12.05□□□□□ -0.48
SMPD4-219ENST00000491128 APLNRP35414 380 aa12.05□□□□□ -0.48
SMPD4-219ENST00000491128 ARR3P36575 388 aa12.05□□□□□ -0.48
SMPD4-219ENST00000491128 TGFBR3Q03167 851 aa12.05□□□□□ -0.48
SMPD4-219ENST00000491128 FAM166AQ6J272 317 aa12.05□□□□□ -0.48
SMPD4-219ENST00000491128 TMEM53Q6P2H8 277 aa12.05□□□□□ -0.48
SMPD4-219ENST00000491128 C22orf34Q6ZV56 151 aa12.05□□□□□ -0.48
SMPD4-219ENST00000491128 RFPL4BQ6ZWI9 263 aa12.05□□□□□ -0.48
SMPD4-219ENST00000491128 PIGCQ92535 297 aa12.05□□□□□ -0.48
SMPD4-219ENST00000491128 ZNF75AQ96N20 296 aa12.05□□□□□ -0.48
SMPD4-219ENST00000491128 NEDD4LQ96PU5 975 aa12.05□□□□□ -0.48
SMPD4-219ENST00000491128 C1QTNF5Q9BXJ0 243 aa12.05□□□□□ -0.48
SMPD4-219ENST00000491128 RHBDD3Q9Y3P4 386 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms