RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 VAPAQ9P0L0 249 aa10.91□□□□□ -0.66
EXOSC3-207ENST00000490516 ADAM18Q9Y3Q7 739 aa10.91□□□□□ -0.66
EXOSC3-207ENST00000490516 GGT3PA6NGU5 568 aa10.9□□□□□ -0.66
EXOSC3-207ENST00000490516 IMPA2O14732 288 aa10.9□□□□□ -0.66
EXOSC3-207ENST00000490516 SLC16A7O60669 478 aa10.9□□□□□ -0.66
EXOSC3-207ENST00000490516 CEBPDP49716 269 aaPredicted RBP10.9□□□□□ -0.66
EXOSC3-207ENST00000490516 CAV3P56539 151 aa10.9□□□□□ -0.66
EXOSC3-207ENST00000490516 ZNF92Q03936 586 aa10.9□□□□□ -0.66
EXOSC3-207ENST00000490516 FHL1Q13642 323 aa10.9□□□□□ -0.66
EXOSC3-207ENST00000490516 SSX2Q16385 188 aa10.9□□□□□ -0.66
EXOSC3-207ENST00000490516 LDLRAD2Q5SZI1 272 aa10.9□□□□□ -0.66
EXOSC3-207ENST00000490516 LRIF1Q5T3J3 769 aa10.9□□□□□ -0.66
EXOSC3-207ENST00000490516 ZNF788Q6ZQV5 615 aa10.9□□□□□ -0.66
EXOSC3-207ENST00000490516 OVCH2Q7RTZ1 564 aa10.9□□□□□ -0.66
EXOSC3-207ENST00000490516 GLB1L2Q8IW92 636 aa10.9□□□□□ -0.66
EXOSC3-207ENST00000490516 GJC3Q8NFK1 279 aa10.9□□□□□ -0.66
EXOSC3-207ENST00000490516 OR2AE1Q8NHA4 323 aa10.9□□□□□ -0.66
EXOSC3-207ENST00000490516 Q96M85 177 aa10.9□□□□□ -0.66
EXOSC3-207ENST00000490516 DUX3Q96PT4 197 aa10.9□□□□□ -0.66
EXOSC3-207ENST00000490516 P2RX4Q99571 388 aa10.9□□□□□ -0.66
EXOSC3-207ENST00000490516 WDR13Q9H1Z4 485 aa10.9□□□□□ -0.66
EXOSC3-207ENST00000490516 KCNK9Q9NPC2 374 aa10.9□□□□□ -0.66
EXOSC3-207ENST00000490516 SDR39U1Q9NRG7 319 aaPredicted RBP10.9□□□□□ -0.66
EXOSC3-207ENST00000490516 HAO2Q9NYQ3 351 aa10.9□□□□□ -0.66
EXOSC3-207ENST00000490516 MRPL15Q9P015 296 aaKnown RBP10.9□□□□□ -0.66
EXOSC3-207ENST00000490516 MED31Q9Y3C7 131 aa10.9□□□□□ -0.66
EXOSC3-207ENST00000490516 SMAD5-AS1Q9Y6J3 95 aa10.9□□□□□ -0.66
EXOSC3-207ENST00000490516 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.89□□□□□ -0.67
EXOSC3-207ENST00000490516 PRSS37A4D1T9 235 aa10.89□□□□□ -0.67
EXOSC3-207ENST00000490516 BHLHE40O14503 412 aa10.89□□□□□ -0.67
EXOSC3-207ENST00000490516 TYROBPO43914 113 aa10.89□□□□□ -0.67
EXOSC3-207ENST00000490516 RHBDL1O75783 438 aa10.89□□□□□ -0.67
EXOSC3-207ENST00000490516 LPLP06858 475 aa10.89□□□□□ -0.67
EXOSC3-207ENST00000490516 VIMP08670 466 aaKnown RBP10.89□□□□□ -0.67
EXOSC3-207ENST00000490516 GPX2P18283 190 aa10.89□□□□□ -0.67
EXOSC3-207ENST00000490516 GRK5P34947 590 aa10.89□□□□□ -0.67
EXOSC3-207ENST00000490516 GGT2P36268 569 aa10.89□□□□□ -0.67
EXOSC3-207ENST00000490516 TAS2R41P59536 307 aa10.89□□□□□ -0.67
EXOSC3-207ENST00000490516 DPY19L4Q7Z388 723 aa10.89□□□□□ -0.67
EXOSC3-207ENST00000490516 C11orf42Q8N5U0 333 aa10.89□□□□□ -0.67
EXOSC3-207ENST00000490516 ISOC1Q96CN7 298 aa10.89□□□□□ -0.67
EXOSC3-207ENST00000490516 BPIFA2Q96DR5 249 aa10.89□□□□□ -0.67
EXOSC3-207ENST00000490516 MED30Q96HR3 178 aa10.89□□□□□ -0.67
EXOSC3-207ENST00000490516 ZMAT4Q9H898 229 aa10.89□□□□□ -0.67
EXOSC3-207ENST00000490516 EDA2RQ9HAV5 297 aa10.89□□□□□ -0.67
EXOSC3-207ENST00000490516 C19orf12Q9NSK7 152 aa10.89□□□□□ -0.67
EXOSC3-207ENST00000490516 GRHPRQ9UBQ7 328 aa10.89□□□□□ -0.67
EXOSC3-207ENST00000490516 XKRYO14609 159 aa10.88□□□□□ -0.67
EXOSC3-207ENST00000490516 SIGLEC5O15389 551 aa10.88□□□□□ -0.67
EXOSC3-207ENST00000490516 KHDRBS3O75525 346 aaKnown RBP10.88□□□□□ -0.67
EXOSC3-207ENST00000490516 IFI30P13284 250 aa10.88□□□□□ -0.67
EXOSC3-207ENST00000490516 TNFRSF1BP20333 461 aa10.88□□□□□ -0.67
EXOSC3-207ENST00000490516 SDHAP31040 664 aa10.88□□□□□ -0.67
EXOSC3-207ENST00000490516 MYCNOSP40205 109 aa10.88□□□□□ -0.67
EXOSC3-207ENST00000490516 RAB25P57735 213 aa10.88□□□□□ -0.67
EXOSC3-207ENST00000490516 RPL23AP62750 156 aaKnown RBP10.88□□□□□ -0.67
EXOSC3-207ENST00000490516 MZT1Q08AG7 82 aa10.88□□□□□ -0.67
EXOSC3-207ENST00000490516 TRAP1Q12931 704 aaKnown RBP10.88□□□□□ -0.67
EXOSC3-207ENST00000490516 PIN1Q13526 163 aaPredicted RBP10.88□□□□□ -0.67
EXOSC3-207ENST00000490516 KCNMB1Q16558 191 aa10.88□□□□□ -0.67
EXOSC3-207ENST00000490516 SNAI3Q3KNW1 292 aa10.88□□□□□ -0.67
EXOSC3-207ENST00000490516 CFAP77Q6ZQR2 320 aa10.88□□□□□ -0.67
EXOSC3-207ENST00000490516 MAVSQ7Z434 540 aa10.88□□□□□ -0.67
EXOSC3-207ENST00000490516 OR1M1Q8NGA1 313 aa10.88□□□□□ -0.67
EXOSC3-207ENST00000490516 TAMM41Q96BW9 452 aa10.88□□□□□ -0.67
EXOSC3-207ENST00000490516 DNTTIP1Q9H147 329 aa10.88□□□□□ -0.67
EXOSC3-207ENST00000490516 SYT4Q9H2B2 425 aa10.88□□□□□ -0.67
EXOSC3-207ENST00000490516 RIMS3Q9UJD0 308 aa10.88□□□□□ -0.67
EXOSC3-207ENST00000490516 TRBV5-3A0A0A0MS03 114 aa10.87□□□□□ -0.67
EXOSC3-207ENST00000490516 SH2D7A6NKC9 451 aaPredicted RBP10.87□□□□□ -0.67
EXOSC3-207ENST00000490516 NUDT19A8MXV4 375 aa10.87□□□□□ -0.67
EXOSC3-207ENST00000490516 CDIPTO14735 213 aa10.87□□□□□ -0.67
EXOSC3-207ENST00000490516 SNRNP70P08621 437 aaKnown RBP10.87□□□□□ -0.67
EXOSC3-207ENST00000490516 ACAA1P09110 424 aaPredicted RBP10.87□□□□□ -0.67
EXOSC3-207ENST00000490516 PPIBP23284 216 aaKnown RBP10.87□□□□□ -0.67
EXOSC3-207ENST00000490516 NAA10P41227 235 aaPredicted RBP10.87□□□□□ -0.67
EXOSC3-207ENST00000490516 CENPAP49450 140 aa10.87□□□□□ -0.67
EXOSC3-207ENST00000490516 PAGE3Q5JUK9 113 aa10.87□□□□□ -0.67
EXOSC3-207ENST00000490516 GLYATL3Q5SZD4 288 aa10.87□□□□□ -0.67
EXOSC3-207ENST00000490516 ZNF782Q6ZMW2 699 aaPredicted RBP10.87□□□□□ -0.67
EXOSC3-207ENST00000490516 PIGWQ7Z7B1 504 aa10.87□□□□□ -0.67
EXOSC3-207ENST00000490516 LINC00346Q8IVM7 164 aa10.87□□□□□ -0.67
EXOSC3-207ENST00000490516 KIRREL3Q8IZU9 778 aa10.87□□□□□ -0.67
EXOSC3-207ENST00000490516 ZNRF1Q8ND25 227 aa10.87□□□□□ -0.67
EXOSC3-207ENST00000490516 OR56B2PQ8NGI1 322 aa10.87□□□□□ -0.67
EXOSC3-207ENST00000490516 OR8S1Q8NH09 359 aa10.87□□□□□ -0.67
EXOSC3-207ENST00000490516 ANGPTL6Q8NI99 470 aa10.87□□□□□ -0.67
EXOSC3-207ENST00000490516 FOXRED1Q96CU9 486 aaPredicted RBP10.87□□□□□ -0.67
EXOSC3-207ENST00000490516 MALSU1Q96EH3 234 aa10.87□□□□□ -0.67
EXOSC3-207ENST00000490516 RAB3IPQ96QF0 476 aaPredicted RBP10.87□□□□□ -0.67
EXOSC3-207ENST00000490516 PITX2Q99697 317 aa10.87□□□□□ -0.67
EXOSC3-207ENST00000490516 ZNF256Q9Y2P7 627 aaPredicted RBP10.87□□□□□ -0.67
EXOSC3-207ENST00000490516 SASH3O75995 380 aa10.86□□□□□ -0.67
EXOSC3-207ENST00000490516 ARG1P05089 322 aa10.86□□□□□ -0.67
EXOSC3-207ENST00000490516 MXRA7P84157 204 aa10.86□□□□□ -0.67
EXOSC3-207ENST00000490516 MPP2Q14168 576 aa10.86□□□□□ -0.67
EXOSC3-207ENST00000490516 ABCA11PQ4W5N1 156 aa10.86□□□□□ -0.67
EXOSC3-207ENST00000490516 LHFPL2Q6ZUX7 228 aa10.86□□□□□ -0.67
EXOSC3-207ENST00000490516 OR2W3Q7Z3T1 314 aa10.86□□□□□ -0.67
EXOSC3-207ENST00000490516 TSEN54Q7Z6J9 526 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms