RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 APOFQ13790 326 aa14.62□□□□□ -0.07
SEC13-218ENST00000490283 MPPED2Q15777 294 aa14.62□□□□□ -0.07
SEC13-218ENST00000490283 ATP6AP1Q15904 470 aa14.62□□□□□ -0.07
SEC13-218ENST00000490283 FAHD1Q6P587 224 aa14.62□□□□□ -0.07
SEC13-218ENST00000490283 DCDC5Q6ZRR9 648 aa14.62□□□□□ -0.07
SEC13-218ENST00000490283 KRT77Q7Z794 578 aa14.62□□□□□ -0.07
SEC13-218ENST00000490283 BOLLQ8N9W6 283 aaKnown RBP14.62□□□□□ -0.07
SEC13-218ENST00000490283 CSNK2A3Q8NEV1 391 aa14.62□□□□□ -0.07
SEC13-218ENST00000490283 ZFAND2BQ8WV99 257 aa14.62□□□□□ -0.07
SEC13-218ENST00000490283 DVL3Q92997 716 aaPredicted RBP14.62□□□□□ -0.07
SEC13-218ENST00000490283 UTP4Q969X6 686 aaKnown RBP14.62□□□□□ -0.07
SEC13-218ENST00000490283 NTN4Q9HB63 628 aa14.62□□□□□ -0.07
SEC13-218ENST00000490283 MMP26Q9NRE1 261 aa14.62□□□□□ -0.07
SEC13-218ENST00000490283 CLN8Q9UBY8 286 aa14.62□□□□□ -0.07
SEC13-218ENST00000490283 ENOPH1Q9UHY7 261 aa14.62□□□□□ -0.07
SEC13-218ENST00000490283 INSIG2Q9Y5U4 225 aa14.62□□□□□ -0.07
SEC13-218ENST00000490283 G3V2T6 193 aa14.61□□□□□ -0.07
SEC13-218ENST00000490283 TRAPPC2LH3BP13 241 aa14.61□□□□□ -0.07
SEC13-218ENST00000490283 RGS9O75916 674 aaPredicted RBP14.61□□□□□ -0.07
SEC13-218ENST00000490283 GRPP07492 148 aa14.61□□□□□ -0.07
SEC13-218ENST00000490283 FAM3AP98173 230 aa14.61□□□□□ -0.07
SEC13-218ENST00000490283 OR8B8Q15620 311 aa14.61□□□□□ -0.07
SEC13-218ENST00000490283 FAM201AQ5SY85 155 aa14.61□□□□□ -0.07
SEC13-218ENST00000490283 KCTD18Q6PI47 426 aaPredicted RBP14.61□□□□□ -0.07
SEC13-218ENST00000490283 LRRN1Q6UXK5 716 aa14.61□□□□□ -0.07
SEC13-218ENST00000490283 USP43Q70EL4 1123 aa14.61□□□□□ -0.07
SEC13-218ENST00000490283 ZDHHC13Q8IUH4 622 aa14.61□□□□□ -0.07
SEC13-218ENST00000490283 DEFB108BQ8NET1 73 aa14.61□□□□□ -0.07
SEC13-218ENST00000490283 BBS1Q8NFJ9 593 aa14.61□□□□□ -0.07
SEC13-218ENST00000490283 SGK3Q96BR1 496 aa14.61□□□□□ -0.07
SEC13-218ENST00000490283 AMELYQ99218 206 aa14.61□□□□□ -0.07
SEC13-218ENST00000490283 YIPF3Q9GZM5 350 aa14.61□□□□□ -0.07
SEC13-218ENST00000490283 C1orf123Q9NWV4 160 aa14.61□□□□□ -0.07
SEC13-218ENST00000490283 OPN4Q9UHM6 478 aa14.61□□□□□ -0.07
SEC13-218ENST00000490283 AP4S1Q9Y587 144 aa14.61□□□□□ -0.07
SEC13-218ENST00000490283 STAB1Q9NY15 2570 aa14.61□□□□□ -0.07
SEC13-218ENST00000490283 DNHD1Q96M86 4753 aa14.61□□□□□ -0.07
SEC13-218ENST00000490283 TRAV38-1A0A0B4J264 116 aa14.6□□□□□ -0.07
SEC13-218ENST00000490283 hCG_38984A0A1B0GV85 526 aa14.6□□□□□ -0.07
SEC13-218ENST00000490283 ANXA2P2A6NMY6 339 aa14.6□□□□□ -0.07
SEC13-218ENST00000490283 TRIM77I1YAP6 450 aa14.6□□□□□ -0.07
SEC13-218ENST00000490283 LGALS8O00214 317 aa14.6□□□□□ -0.07
SEC13-218ENST00000490283 VENTXO95231 258 aa14.6□□□□□ -0.07
SEC13-218ENST00000490283 PTBP3O95758 552 aaKnown RBP14.6□□□□□ -0.07
SEC13-218ENST00000490283 ANOS1P23352 680 aa14.6□□□□□ -0.07
SEC13-218ENST00000490283 GSK3AP49840 483 aa14.6□□□□□ -0.07
SEC13-218ENST00000490283 DAPP51397 102 aa14.6□□□□□ -0.07
SEC13-218ENST00000490283 PTGES3Q15185 160 aaKnown RBP14.6□□□□□ -0.07
SEC13-218ENST00000490283 RBMS3Q6XE24 437 aaKnown RBP14.6□□□□□ -0.07
SEC13-218ENST00000490283 PAPOLGQ9BWT3 736 aaKnown RBP14.6□□□□□ -0.07
SEC13-218ENST00000490283 H2AFY2Q9P0M6 372 aaPredicted RBP14.6□□□□□ -0.07
SEC13-218ENST00000490283 ZNF391Q9UJN7 358 aa14.6□□□□□ -0.07
SEC13-218ENST00000490283 TMEM14AQ9Y6G1 99 aa14.6□□□□□ -0.07
SEC13-218ENST00000490283 PHYHO14832 338 aa14.59□□□□□ -0.07
SEC13-218ENST00000490283 NDUFA2O43678 99 aa14.59□□□□□ -0.07
SEC13-218ENST00000490283 SLC2A5P22732 501 aa14.59□□□□□ -0.07
SEC13-218ENST00000490283 HILS1P60008 231 aa14.59□□□□□ -0.07
SEC13-218ENST00000490283 PSMA6P60900 246 aaKnown RBP14.59□□□□□ -0.07
SEC13-218ENST00000490283 IL5RAQ01344 420 aa14.59□□□□□ -0.07
SEC13-218ENST00000490283 PRSS45Q7RTY3 260 aa14.59□□□□□ -0.07
SEC13-218ENST00000490283 SEMA6DQ8NFY4 1073 aa14.59□□□□□ -0.07
SEC13-218ENST00000490283 SLC6A7Q99884 636 aa14.59□□□□□ -0.07
SEC13-218ENST00000490283 MICU1Q9BPX6 476 aa14.59□□□□□ -0.07
SEC13-218ENST00000490283 MROQ9BYG7 248 aa14.59□□□□□ -0.07
SEC13-218ENST00000490283 ABCB9Q9NP78 766 aa14.59□□□□□ -0.07
SEC13-218ENST00000490283 ERVK-18Q9QC07 812 aa14.59□□□□□ -0.07
SEC13-218ENST00000490283 NUP50Q9UKX7 468 aa14.59□□□□□ -0.07
SEC13-218ENST00000490283 IGHV2-70DA0A0C4DH43 119 aa14.58□□□□□ -0.08
SEC13-218ENST00000490283 OOEPA6NGQ2 149 aa14.58□□□□□ -0.08
SEC13-218ENST00000490283 C3orf80F5H4A9 247 aa14.58□□□□□ -0.08
SEC13-218ENST00000490283 MRPL3P09001 348 aaKnown RBP14.58□□□□□ -0.08
SEC13-218ENST00000490283 ALOX5APP20292 161 aa14.58□□□□□ -0.08
SEC13-218ENST00000490283 CD80P33681 288 aa14.58□□□□□ -0.08
SEC13-218ENST00000490283 NPY4RP50391 375 aa14.58□□□□□ -0.08
SEC13-218ENST00000490283 ACTG1P63261 375 aa14.58□□□□□ -0.08
SEC13-218ENST00000490283 SFRP4Q6FHJ7 346 aaPredicted RBP14.58□□□□□ -0.08
SEC13-218ENST00000490283 DEGS2Q6QHC5 323 aa14.58□□□□□ -0.08
SEC13-218ENST00000490283 C19orf18Q8NEA5 215 aa14.58□□□□□ -0.08
SEC13-218ENST00000490283 FAM81AQ8TBF8 368 aa14.58□□□□□ -0.08
SEC13-218ENST00000490283 RAB40AQ8WXH6 277 aa14.58□□□□□ -0.08
SEC13-218ENST00000490283 ASB17Q8WXJ9 295 aa14.58□□□□□ -0.08
SEC13-218ENST00000490283 TECTBQ96PL2 329 aa14.58□□□□□ -0.08
SEC13-218ENST00000490283 CNN2Q99439 309 aaKnown RBP14.58□□□□□ -0.08
SEC13-218ENST00000490283 TEAD3Q99594 435 aa14.58□□□□□ -0.08
SEC13-218ENST00000490283 LRP12Q9Y561 859 aa14.58□□□□□ -0.08
SEC13-218ENST00000490283 WNK2Q9Y3S1 2297 aa14.57□□□□□ -0.08
SEC13-218ENST00000490283 ADAM20O43506 726 aa14.57□□□□□ -0.08
SEC13-218ENST00000490283 FSHBP01225 129 aa14.57□□□□□ -0.08
SEC13-218ENST00000490283 CD276Q5ZPR3 534 aa14.57□□□□□ -0.08
SEC13-218ENST00000490283 WDR25Q64LD2 544 aaPredicted RBP14.57□□□□□ -0.08
SEC13-218ENST00000490283 LYPD2Q6UXB3 125 aa14.57□□□□□ -0.08
SEC13-218ENST00000490283 COMMD2Q86X83 199 aa14.57□□□□□ -0.08
SEC13-218ENST00000490283 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.57□□□□□ -0.08
SEC13-218ENST00000490283 C22orf15Q8WYQ4 148 aa14.57□□□□□ -0.08
SEC13-218ENST00000490283 HIST1H2AAQ96QV6 131 aa14.57□□□□□ -0.08
SEC13-218ENST00000490283 NUDT16L1Q9BRJ7 211 aaKnown RBP14.57□□□□□ -0.08
SEC13-218ENST00000490283 RTL8AQ9BWD3 113 aa14.57□□□□□ -0.08
SEC13-218ENST00000490283 GABARAPL1Q9H0R8 117 aa14.57□□□□□ -0.08
SEC13-218ENST00000490283 RNPEPL1Q9HAU8 725 aa14.57□□□□□ -0.08
SEC13-218ENST00000490283 KLHDC2Q9Y2U9 406 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 141.6 ms