RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 ZNF90Q03938 601 aa8□□□□□ -1.13
LSAMP-205ENST00000490035 CALHM3Q86XJ0 350 aa8□□□□□ -1.13
LSAMP-205ENST00000490035 DICER1Q9UPY3 1922 aaKnown RBP8□□□□□ -1.13
LSAMP-205ENST00000490035 COL24A1Q17RW2 1714 aa8□□□□□ -1.13
LSAMP-205ENST00000490035 A0A1W2PPC4 97 aa8□□□□□ -1.13
LSAMP-205ENST00000490035 C5orf49A4QMS7 147 aa8□□□□□ -1.13
LSAMP-205ENST00000490035 C16orf52Q8NHV5 167 aa8□□□□□ -1.13
LSAMP-205ENST00000490035 NMES1Q9C002 83 aa8□□□□□ -1.13
LSAMP-205ENST00000490035 CPN1P15169 458 aa8□□□□□ -1.13
LSAMP-205ENST00000490035 CCL11P51671 97 aa8□□□□□ -1.13
LSAMP-205ENST00000490035 JMJD6Q6NYC1 403 aaPredicted RBP8□□□□□ -1.13
LSAMP-205ENST00000490035 CHST2Q9Y4C5 530 aa8□□□□□ -1.13
LSAMP-205ENST00000490035 HMX2A2RU54 273 aa8□□□□□ -1.13
LSAMP-205ENST00000490035 AQP7P3A6NL99 342 aa8□□□□□ -1.13
LSAMP-205ENST00000490035 G0S2P27469 103 aa8□□□□□ -1.13
LSAMP-205ENST00000490035 LINC00696Q6ZRV3 163 aa8□□□□□ -1.13
LSAMP-205ENST00000490035 ZNF680Q8NEM1 530 aa8□□□□□ -1.13
LSAMP-205ENST00000490035 MTCH1Q9NZJ7 389 aa8□□□□□ -1.13
LSAMP-205ENST00000490035 POU2F2P09086 479 aa8□□□□□ -1.13
LSAMP-205ENST00000490035 LTC4SQ16873 150 aa8□□□□□ -1.13
LSAMP-205ENST00000490035 SPANXN5Q5MJ07 72 aa8□□□□□ -1.13
LSAMP-205ENST00000490035 OTOSQ8NHW6 89 aa8□□□□□ -1.13
LSAMP-205ENST00000490035 ADTRPQ96IZ2 230 aa8□□□□□ -1.13
LSAMP-205ENST00000490035 CTRCQ99895 268 aa8□□□□□ -1.13
LSAMP-205ENST00000490035 FAM173AQ9BQD7 235 aa8□□□□□ -1.13
LSAMP-205ENST00000490035 MENTQ9BUN1 341 aa8□□□□□ -1.13
LSAMP-205ENST00000490035 ST3GAL6Q9Y274 331 aa8□□□□□ -1.13
LSAMP-205ENST00000490035 CABIN1Q9Y6J0 2220 aa8□□□□□ -1.13
LSAMP-205ENST00000490035 MEIKINA0A087WXM9 373 aa8□□□□□ -1.13
LSAMP-205ENST00000490035 DCTN6O00399 190 aa8□□□□□ -1.13
LSAMP-205ENST00000490035 CNN1P51911 297 aaKnown RBP8□□□□□ -1.13
LSAMP-205ENST00000490035 TPPP2P59282 170 aa8□□□□□ -1.13
LSAMP-205ENST00000490035 ACSM5Q6NUN0 579 aa8□□□□□ -1.13
LSAMP-205ENST00000490035 OR51E1Q8TCB6 317 aa8□□□□□ -1.13
LSAMP-205ENST00000490035 RLN3Q8WXF3 142 aa8□□□□□ -1.13
LSAMP-205ENST00000490035 SPACA9Q96E40 222 aaPredicted RBP8□□□□□ -1.13
LSAMP-205ENST00000490035 GNB4Q9HAV0 340 aa8□□□□□ -1.13
LSAMP-205ENST00000490035 COL5A3P25940 1745 aaPredicted RBP8□□□□□ -1.13
LSAMP-205ENST00000490035 HMSDA8MTL9 139 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 FGF2P09038 288 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 MMP7P09237 267 aaPredicted RBP7.99□□□□□ -1.13
LSAMP-205ENST00000490035 FUT3P21217 361 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 PPP1CBP62140 327 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 PNRC1Q12796 327 aaPredicted RBP7.99□□□□□ -1.13
LSAMP-205ENST00000490035 TMEM182Q6ZP80 229 aaPredicted RBP7.99□□□□□ -1.13
LSAMP-205ENST00000490035 OR2T6Q8NHC8 308 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 MRGPRX1Q96LB2 322 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 SLC25A37Q9NYZ2 338 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 CGGBP1Q9UFW8 167 aaPredicted RBP7.99□□□□□ -1.13
LSAMP-205ENST00000490035 MYOFQ9NZM1 2061 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 IGLV3-16A0A075B6K0 115 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 RFPL4AA6NLU0 287 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 RFPL4AL1F8VTS6 287 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 CTDSPLO15194 276 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 LRP3O75074 770 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 GALNSP34059 522 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 EDDM3AQ14507 147 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 NKAIN2Q5VXU1 208 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 C11orf87Q6NUJ2 197 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 OR2V1Q8NHB1 315 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 SMIM7Q9BQ49 75 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 SIRT5Q9NXA8 310 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 CLEC18AA5D8T8 446 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 NUPL2O15504 423 aaKnown RBP7.99□□□□□ -1.13
LSAMP-205ENST00000490035 OR5H8P0DN80 308 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 ZP3P21754 424 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 GZMKP49863 264 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 FABP5Q01469 135 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 MOGAT2Q3SYC2 334 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 CLEC18CQ8NCF0 446 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 WDR34Q96EX3 536 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 FGF22Q9HCT0 170 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 RAB27BO00194 218 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 UPK1AO00322 258 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 GPX5O75715 221 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 BAMBIQ13145 260 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 CLDN23Q96B33 292 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 GDF2Q9UK05 429 aaPredicted RBP7.99□□□□□ -1.13
LSAMP-205ENST00000490035 PRR35P0CG20 571 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 CLLU1Q5K131 121 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 ZBTB37Q5TC79 503 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 TMEM268Q5VZI3 342 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 FBXL6Q8N531 539 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 OR13D1Q8NGV5 346 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 ERGIC1Q969X5 290 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 PRRX2Q99811 253 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 IKZF5Q9H5V7 419 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 TMEM9BQ9NQ34 198 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 EXOGQ9Y2C4 368 aaKnown RBP7.99□□□□□ -1.13
LSAMP-205ENST00000490035 RALGAPA2Q2PPJ7 1873 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 CST4P01036 141 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 SLC19A1P41440 591 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 RPL11P62913 178 aaKnown RBP7.99□□□□□ -1.13
LSAMP-205ENST00000490035 CYHR1Q6ZMK1 362 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 AKIP1Q9NQ31 210 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 B9D1Q9UPM9 204 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 HEATR5BQ9P2D3 2071 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 KIF26BQ2KJY2 2108 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 DOCK3Q8IZD9 2030 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 OR7C2O60412 319 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms