RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 PIAS4Q8N2W9 510 aaPredicted RBP11.48□□□□□ -0.57
TRAIP-210ENST00000489948 PARP16Q8N5Y8 322 aa11.48□□□□□ -0.57
TRAIP-210ENST00000489948 OR13C3Q8NGS6 347 aa11.48□□□□□ -0.57
TRAIP-210ENST00000489948 OR13C5Q8NGS8 318 aa11.48□□□□□ -0.57
TRAIP-210ENST00000489948 KLF14Q8TD94 323 aaPredicted RBP11.48□□□□□ -0.57
TRAIP-210ENST00000489948 RAB2BQ8WUD1 216 aa11.48□□□□□ -0.57
TRAIP-210ENST00000489948 TSEN15Q8WW01 171 aaKnown RBP11.48□□□□□ -0.57
TRAIP-210ENST00000489948 TMEM106AQ96A25 262 aa11.48□□□□□ -0.57
TRAIP-210ENST00000489948 TRMT61AQ96FX7 289 aaKnown RBP11.48□□□□□ -0.57
TRAIP-210ENST00000489948 OR14A2Q96R54 314 aa11.48□□□□□ -0.57
TRAIP-210ENST00000489948 OR2J1Q9GZK6 312 aa11.48□□□□□ -0.57
TRAIP-210ENST00000489948 CA10Q9NS85 328 aa11.48□□□□□ -0.57
TRAIP-210ENST00000489948 PTTG3PQ9NZH4 202 aa11.48□□□□□ -0.57
TRAIP-210ENST00000489948 N6AMT1Q9Y5N5 214 aa11.48□□□□□ -0.57
TRAIP-210ENST00000489948 IGLV3-9A0A075B6K5 115 aa11.47□□□□□ -0.57
TRAIP-210ENST00000489948 IQCF6A8MYZ5 107 aa11.47□□□□□ -0.57
TRAIP-210ENST00000489948 GPX5O75715 221 aa11.47□□□□□ -0.57
TRAIP-210ENST00000489948 ARL6IP5O75915 188 aa11.47□□□□□ -0.57
TRAIP-210ENST00000489948 CLDN1O95832 211 aa11.47□□□□□ -0.57
TRAIP-210ENST00000489948 ACKR3P25106 362 aa11.47□□□□□ -0.57
TRAIP-210ENST00000489948 THBS4P35443 961 aa11.47□□□□□ -0.57
TRAIP-210ENST00000489948 ERVS71-1P61550 626 aa11.47□□□□□ -0.57
TRAIP-210ENST00000489948 RIPPLY1Q0D2K3 151 aa11.47□□□□□ -0.57
TRAIP-210ENST00000489948 ZNF718Q3SXZ3 478 aa11.47□□□□□ -0.57
TRAIP-210ENST00000489948 ACSM3Q53FZ2 586 aa11.47□□□□□ -0.57
TRAIP-210ENST00000489948 TMEM42Q69YG0 159 aa11.47□□□□□ -0.57
TRAIP-210ENST00000489948 ADAM5Q6NVV9 412 aa11.47□□□□□ -0.57
TRAIP-210ENST00000489948 FTMTQ8N4E7 242 aa11.47□□□□□ -0.57
TRAIP-210ENST00000489948 CSNK2A3Q8NEV1 391 aa11.47□□□□□ -0.57
TRAIP-210ENST00000489948 SEMA6DQ8NFY4 1073 aa11.47□□□□□ -0.57
TRAIP-210ENST00000489948 KBTBD8Q8NFY9 601 aa11.47□□□□□ -0.57
TRAIP-210ENST00000489948 PP6455Q8WZ26 134 aa11.47□□□□□ -0.57
TRAIP-210ENST00000489948 TMEM203Q969S6 136 aa11.47□□□□□ -0.57
TRAIP-210ENST00000489948 HAVCR1Q96D42 359 aa11.47□□□□□ -0.57
TRAIP-210ENST00000489948 FAM71F1Q96KD3 344 aaPredicted RBP11.47□□□□□ -0.57
TRAIP-210ENST00000489948 SOX7Q9BT81 388 aa11.47□□□□□ -0.57
TRAIP-210ENST00000489948 OR51E2Q9H255 320 aa11.47□□□□□ -0.57
TRAIP-210ENST00000489948 OR51B6Q9H340 312 aa11.47□□□□□ -0.57
TRAIP-210ENST00000489948 PLEKHA1Q9HB21 404 aa11.47□□□□□ -0.57
TRAIP-210ENST00000489948 TXNL4BQ9NX01 149 aaKnown RBP11.47□□□□□ -0.57
TRAIP-210ENST00000489948 CGGBP1Q9UFW8 167 aaPredicted RBP11.47□□□□□ -0.57
TRAIP-210ENST00000489948 SSR3Q9UNL2 185 aa11.47□□□□□ -0.57
TRAIP-210ENST00000489948 CEPT1Q9Y6K0 416 aa11.47□□□□□ -0.57
TRAIP-210ENST00000489948 ABCA4P78363 2273 aa11.47□□□□□ -0.57
TRAIP-210ENST00000489948 RAI1Q7Z5J4 1906 aaPredicted RBP11.47□□□□□ -0.57
TRAIP-210ENST00000489948 ZNF816-ZNF321PA0A0X1KG74 233 aa11.46□□□□□ -0.57
TRAIP-210ENST00000489948 A0A1B0GWJ7 208 aa11.46□□□□□ -0.57
TRAIP-210ENST00000489948 FAM221AA4D161 298 aa11.46□□□□□ -0.57
TRAIP-210ENST00000489948 A6NNC1 897 aa11.46□□□□□ -0.57
TRAIP-210ENST00000489948 CD300LBA8K4G0 201 aa11.46□□□□□ -0.57
TRAIP-210ENST00000489948 AIREO43918 545 aa11.46□□□□□ -0.57
TRAIP-210ENST00000489948 ALX3O95076 343 aa11.46□□□□□ -0.57
TRAIP-210ENST00000489948 IGHV3-13P01766 116 aa11.46□□□□□ -0.57
TRAIP-210ENST00000489948 GCH1P30793 250 aa11.46□□□□□ -0.57
TRAIP-210ENST00000489948 EVX1P49640 407 aa11.46□□□□□ -0.57
TRAIP-210ENST00000489948 HLXQ14774 488 aaPredicted RBP11.46□□□□□ -0.57
TRAIP-210ENST00000489948 CTF1Q16619 201 aa11.46□□□□□ -0.57
TRAIP-210ENST00000489948 ZNF672Q499Z4 452 aaPredicted RBP11.46□□□□□ -0.57
TRAIP-210ENST00000489948 SPATA46Q5T0L3 261 aa11.46□□□□□ -0.57
TRAIP-210ENST00000489948 GPR107Q5VW38 600 aa11.46□□□□□ -0.57
TRAIP-210ENST00000489948 ZNF529Q6P280 563 aa11.46□□□□□ -0.57
TRAIP-210ENST00000489948 UTS2BQ765I0 119 aa11.46□□□□□ -0.57
TRAIP-210ENST00000489948 CLVS1Q8IUQ0 354 aaPredicted RBP11.46□□□□□ -0.57
TRAIP-210ENST00000489948 OR56B2PQ8NGI1 322 aa11.46□□□□□ -0.57
TRAIP-210ENST00000489948 UBASH3BQ8TF42 649 aa11.46□□□□□ -0.57
TRAIP-210ENST00000489948 PIGTQ969N2 578 aa11.46□□□□□ -0.57
TRAIP-210ENST00000489948 MRPL24Q96A35 216 aaKnown RBP11.46□□□□□ -0.57
TRAIP-210ENST00000489948 PIK3IP1Q96FE7 263 aa11.46□□□□□ -0.57
TRAIP-210ENST00000489948 TECTBQ96PL2 329 aa11.46□□□□□ -0.57
TRAIP-210ENST00000489948 HS3ST6Q96QI5 342 aa11.46□□□□□ -0.57
TRAIP-210ENST00000489948 CHCHD6Q9BRQ6 235 aa11.46□□□□□ -0.57
TRAIP-210ENST00000489948 CHST5Q9GZS9 411 aa11.46□□□□□ -0.57
TRAIP-210ENST00000489948 ABCB9Q9NP78 766 aa11.46□□□□□ -0.57
TRAIP-210ENST00000489948 MRPL15Q9P015 296 aaKnown RBP11.46□□□□□ -0.57
TRAIP-210ENST00000489948 GSTK1Q9Y2Q3 226 aa11.46□□□□□ -0.57
TRAIP-210ENST00000489948 CMAHPQ9Y471 501 aa11.46□□□□□ -0.57
TRAIP-210ENST00000489948 DPPA5A6NC42 116 aa11.45□□□□□ -0.58
TRAIP-210ENST00000489948 A6NHS1 94 aa11.45□□□□□ -0.58
TRAIP-210ENST00000489948 PIN1P1O15428 100 aa11.45□□□□□ -0.58
TRAIP-210ENST00000489948 NOL3O60936 208 aaKnown RBP11.45□□□□□ -0.58
TRAIP-210ENST00000489948 CST4P01036 141 aa11.45□□□□□ -0.58
TRAIP-210ENST00000489948 ZNF20P17024 532 aa11.45□□□□□ -0.58
TRAIP-210ENST00000489948 IGFBP3P17936 291 aaPredicted RBP11.45□□□□□ -0.58
TRAIP-210ENST00000489948 MPV17P39210 176 aa11.45□□□□□ -0.58
TRAIP-210ENST00000489948 KLF3P57682 345 aaPredicted RBP11.45□□□□□ -0.58
TRAIP-210ENST00000489948 PSG7Q13046 419 aa11.45□□□□□ -0.58
TRAIP-210ENST00000489948 INSL4Q14641 139 aa11.45□□□□□ -0.58
TRAIP-210ENST00000489948 MSMPQ1L6U9 139 aa11.45□□□□□ -0.58
TRAIP-210ENST00000489948 HSD17B12Q53GQ0 312 aa11.45□□□□□ -0.58
TRAIP-210ENST00000489948 TMEM255AQ5JRV8 349 aa11.45□□□□□ -0.58
TRAIP-210ENST00000489948 ASPHD2Q6ICH7 369 aa11.45□□□□□ -0.58
TRAIP-210ENST00000489948 CEACAM19Q7Z692 300 aa11.45□□□□□ -0.58
TRAIP-210ENST00000489948 SERPINA12Q8IW75 414 aa11.45□□□□□ -0.58
TRAIP-210ENST00000489948 SYNPRQ8TBG9 265 aa11.45□□□□□ -0.58
TRAIP-210ENST00000489948 RPL3LQ92901 407 aaKnown RBP11.45□□□□□ -0.58
TRAIP-210ENST00000489948 ISOC1Q96CN7 298 aa11.45□□□□□ -0.58
TRAIP-210ENST00000489948 CMBLQ96DG6 245 aa11.45□□□□□ -0.58
TRAIP-210ENST00000489948 ADAT3Q96EY9 351 aaPredicted RBP11.45□□□□□ -0.58
TRAIP-210ENST00000489948 KCTD7Q96MP8 289 aa11.45□□□□□ -0.58
TRAIP-210ENST00000489948 FAM192AQ9GZU8 254 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms