RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 TREX1Q9NSU2 369 aa2.77□□□□□ -1.97
XRN1-213ENST00000489241 KLF12Q9Y4X4 402 aa2.77□□□□□ -1.97
XRN1-213ENST00000489241 A0A0U1RQV1 116 aa2.76□□□□□ -1.97
XRN1-213ENST00000489241 ANKRD20A5PA0PJZ0 165 aa2.76□□□□□ -1.97
XRN1-213ENST00000489241 HSBP1L1C9JCN9 74 aa2.76□□□□□ -1.97
XRN1-213ENST00000489241 E7EWF7 191 aa2.76□□□□□ -1.97
XRN1-213ENST00000489241 ALOX12BO75342 701 aa2.76□□□□□ -1.97
XRN1-213ENST00000489241 GCM2O75603 506 aaPredicted RBP2.76□□□□□ -1.97
XRN1-213ENST00000489241 SMC2O95347 1197 aa2.76□□□□□ -1.97
XRN1-213ENST00000489241 TTC4O95801 387 aa2.76□□□□□ -1.97
XRN1-213ENST00000489241 PRKACBP22694 351 aa2.76□□□□□ -1.97
XRN1-213ENST00000489241 DTYMKP23919 212 aa2.76□□□□□ -1.97
XRN1-213ENST00000489241 LOXP28300 417 aaPredicted RBP2.76□□□□□ -1.97
XRN1-213ENST00000489241 PPOXP50336 477 aa2.76□□□□□ -1.97
XRN1-213ENST00000489241 GFERP55789 205 aa2.76□□□□□ -1.97
XRN1-213ENST00000489241 MLF1P58340 268 aa2.76□□□□□ -1.97
XRN1-213ENST00000489241 ST3GAL4Q11206 333 aa2.76□□□□□ -1.97
XRN1-213ENST00000489241 MAD2L1BPQ15013 274 aaPredicted RBP2.76□□□□□ -1.97
XRN1-213ENST00000489241 OR1Q1Q15612 314 aa2.76□□□□□ -1.97
XRN1-213ENST00000489241 TNXAQ16473 311 aa2.76□□□□□ -1.97
XRN1-213ENST00000489241 TSPO2Q5TGU0 170 aa2.76□□□□□ -1.97
XRN1-213ENST00000489241 EPGNQ6UW88 154 aa2.76□□□□□ -1.97
XRN1-213ENST00000489241 LINC00469Q8N7U9 141 aa2.76□□□□□ -1.97
XRN1-213ENST00000489241 DRAXINQ8NBI3 349 aaPredicted RBP2.76□□□□□ -1.97
XRN1-213ENST00000489241 OR10Z1Q8NGY1 313 aa2.76□□□□□ -1.97
XRN1-213ENST00000489241 OR10G6Q8NH81 332 aa2.76□□□□□ -1.97
XRN1-213ENST00000489241 LGALS14Q8TCE9 139 aa2.76□□□□□ -1.97
XRN1-213ENST00000489241 SRSF12Q8WXF0 261 aaKnown RBP2.76□□□□□ -1.97
XRN1-213ENST00000489241 ZBED3Q96IU2 234 aaPredicted RBP2.76□□□□□ -1.97
XRN1-213ENST00000489241 CPB2Q96IY4 423 aa2.76□□□□□ -1.97
XRN1-213ENST00000489241 TEAD3Q99594 435 aa2.76□□□□□ -1.97
XRN1-213ENST00000489241 TSNAXQ99598 290 aaKnown RBP2.76□□□□□ -1.97
XRN1-213ENST00000489241 HSD17B10Q99714 261 aaKnown RBP2.76□□□□□ -1.97
XRN1-213ENST00000489241 NAPGQ99747 312 aaPredicted RBP2.76□□□□□ -1.97
XRN1-213ENST00000489241 TMEM243Q9BU79 118 aa2.76□□□□□ -1.97
XRN1-213ENST00000489241 PLA2G2FQ9BZM2 168 aa2.76□□□□□ -1.97
XRN1-213ENST00000489241 ARV1Q9H2C2 271 aa2.76□□□□□ -1.97
XRN1-213ENST00000489241 OR51B5Q9H339 312 aa2.76□□□□□ -1.97
XRN1-213ENST00000489241 LHX9Q9NQ69 397 aa2.76□□□□□ -1.97
XRN1-213ENST00000489241 OR12D3Q9UGF7 316 aa2.76□□□□□ -1.97
XRN1-213ENST00000489241 SIGLEC9Q9Y336 463 aa2.76□□□□□ -1.97
XRN1-213ENST00000489241 COL16A1Q07092 1604 aaPredicted RBP2.75□□□□□ -1.97
XRN1-213ENST00000489241 TDRD6O60522 2096 aaKnown RBP2.75□□□□□ -1.97
XRN1-213ENST00000489241 GPATCH8Q9UKJ3 1502 aaKnown RBP2.75□□□□□ -1.97
XRN1-213ENST00000489241 IGKV1-27A0A075B6S5 117 aa2.75□□□□□ -1.97
XRN1-213ENST00000489241 TRAV8-7A0A075B6U6 113 aa2.75□□□□□ -1.97
XRN1-213ENST00000489241 IGHV2OR16-5A0A0B4J2B6 119 aa2.75□□□□□ -1.97
XRN1-213ENST00000489241 SEC14L6B5MCN3 397 aa2.75□□□□□ -1.97
XRN1-213ENST00000489241 KRBOX1C9JBD0 128 aa2.75□□□□□ -1.97
XRN1-213ENST00000489241 RTL8CO15255 209 aa2.75□□□□□ -1.97
XRN1-213ENST00000489241 REM1O75628 298 aa2.75□□□□□ -1.97
XRN1-213ENST00000489241 ZMPSTE24O75844 475 aa2.75□□□□□ -1.97
XRN1-213ENST00000489241 KIR3DL2P43630 455 aa2.75□□□□□ -1.97
XRN1-213ENST00000489241 ESRRGP62508 458 aa2.75□□□□□ -1.97
XRN1-213ENST00000489241 CRADDP78560 199 aa2.75□□□□□ -1.97
XRN1-213ENST00000489241 CYP24A1Q07973 514 aa2.75□□□□□ -1.97
XRN1-213ENST00000489241 DYNC1I2Q13409 638 aaKnown RBP2.75□□□□□ -1.97
XRN1-213ENST00000489241 XRCC4Q13426 336 aa2.75□□□□□ -1.97
XRN1-213ENST00000489241 PSG3Q16557 428 aa2.75□□□□□ -1.97
XRN1-213ENST00000489241 SNRNP35Q16560 246 aaKnown RBP2.75□□□□□ -1.97
XRN1-213ENST00000489241 NTM-AS1Q6ZSK4 140 aa2.75□□□□□ -1.97
XRN1-213ENST00000489241 KRTAP5-5Q701N2 237 aaPredicted RBP2.75□□□□□ -1.97
XRN1-213ENST00000489241 COPS6Q7L5N1 327 aa2.75□□□□□ -1.97
XRN1-213ENST00000489241 ZNF786Q8N393 782 aa2.75□□□□□ -1.97
XRN1-213ENST00000489241 UBAC2Q8NBM4 344 aa2.75□□□□□ -1.97
XRN1-213ENST00000489241 C19orf18Q8NEA5 215 aa2.75□□□□□ -1.97
XRN1-213ENST00000489241 OR5W2Q8NH69 310 aa2.75□□□□□ -1.97
XRN1-213ENST00000489241 RXFP2Q8WXD0 754 aa2.75□□□□□ -1.97
XRN1-213ENST00000489241 CDKL2Q92772 493 aa2.75□□□□□ -1.97
XRN1-213ENST00000489241 PDXPQ96GD0 296 aa2.75□□□□□ -1.97
XRN1-213ENST00000489241 LINC00167Q96N53 147 aa2.75□□□□□ -1.97
XRN1-213ENST00000489241 RDH12Q96NR8 316 aa2.75□□□□□ -1.97
XRN1-213ENST00000489241 CAMK2N2Q96S95 79 aa2.75□□□□□ -1.97
XRN1-213ENST00000489241 KCNS3Q9BQ31 491 aa2.75□□□□□ -1.97
XRN1-213ENST00000489241 FRMD8P1Q9BZ68 369 aaPredicted RBP2.75□□□□□ -1.97
XRN1-213ENST00000489241 ULBP2Q9BZM5 246 aa2.75□□□□□ -1.97
XRN1-213ENST00000489241 OR52D1Q9H346 318 aa2.75□□□□□ -1.97
XRN1-213ENST00000489241 WFDC1Q9HC57 220 aa2.75□□□□□ -1.97
XRN1-213ENST00000489241 VCX3AQ9NNX9 186 aa2.75□□□□□ -1.97
XRN1-213ENST00000489241 HMG20AQ9NP66 347 aa2.75□□□□□ -1.97
XRN1-213ENST00000489241 TREM1Q9NP99 234 aa2.75□□□□□ -1.97
XRN1-213ENST00000489241 RBFOX1Q9NWB1 397 aaKnown RBP2.75□□□□□ -1.97
XRN1-213ENST00000489241 CLEC2DQ9UHP7 191 aa2.75□□□□□ -1.97
XRN1-213ENST00000489241 POFUT2Q9Y2G5 429 aa2.75□□□□□ -1.97
XRN1-213ENST00000489241 HYOU1Q9Y4L1 999 aa2.75□□□□□ -1.97
XRN1-213ENST00000489241 PRRC2AP48634 2157 aaKnown RBP2.74□□□□□ -1.97
XRN1-213ENST00000489241 PIKFYVEQ9Y2I7 2098 aa2.74□□□□□ -1.97
XRN1-213ENST00000489241 TRAV19A0A0A6YYK7 116 aa2.74□□□□□ -1.97
XRN1-213ENST00000489241 IGHV1OR15-9A0A0B4J2B8 117 aa2.74□□□□□ -1.97
XRN1-213ENST00000489241 A0A1B0GW15 77 aa2.74□□□□□ -1.97
XRN1-213ENST00000489241 A0A1W2PP18 115 aa2.74□□□□□ -1.97
XRN1-213ENST00000489241 H7C2Y5 167 aa2.74□□□□□ -1.97
XRN1-213ENST00000489241 B4GALT5O43286 388 aa2.74□□□□□ -1.97
XRN1-213ENST00000489241 SLC22A5O76082 557 aa2.74□□□□□ -1.97
XRN1-213ENST00000489241 YIF1AO95070 293 aa2.74□□□□□ -1.97
XRN1-213ENST00000489241 PTHP01270 115 aa2.74□□□□□ -1.97
XRN1-213ENST00000489241 LIPCP11150 499 aa2.74□□□□□ -1.97
XRN1-213ENST00000489241 PGAM1P18669 254 aa2.74□□□□□ -1.97
XRN1-213ENST00000489241 ARR3P36575 388 aa2.74□□□□□ -1.97
XRN1-213ENST00000489241 TALDO1P37837 337 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms