RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 ZNF254O75437 659 aa13.37□□□□□ -0.27
CTDSP1-209ENST00000488627 SRSF10O75494 262 aaKnown RBP13.37□□□□□ -0.27
CTDSP1-209ENST00000488627 AVPP01185 164 aa13.37□□□□□ -0.27
CTDSP1-209ENST00000488627 WNT2P09544 360 aa13.37□□□□□ -0.27
CTDSP1-209ENST00000488627 HNF1AP20823 631 aa13.37□□□□□ -0.27
CTDSP1-209ENST00000488627 PCMT1P22061 227 aa13.37□□□□□ -0.27
CTDSP1-209ENST00000488627 ACKR3P25106 362 aa13.37□□□□□ -0.27
CTDSP1-209ENST00000488627 HTR1FP30939 366 aa13.37□□□□□ -0.27
CTDSP1-209ENST00000488627 THBS2P35442 1172 aa13.37□□□□□ -0.27
CTDSP1-209ENST00000488627 ALDH3A2P51648 485 aa13.37□□□□□ -0.27
CTDSP1-209ENST00000488627 HOXA4Q00056 320 aaPredicted RBP13.37□□□□□ -0.27
CTDSP1-209ENST00000488627 KCTD18Q6PI47 426 aaPredicted RBP13.37□□□□□ -0.27
CTDSP1-209ENST00000488627 WDR86Q86TI4 376 aa13.37□□□□□ -0.27
CTDSP1-209ENST00000488627 GID4Q8IVV7 300 aa13.37□□□□□ -0.27
CTDSP1-209ENST00000488627 KLHL36Q8N4N3 616 aa13.37□□□□□ -0.27
CTDSP1-209ENST00000488627 CBR4Q8N4T8 237 aa13.37□□□□□ -0.27
CTDSP1-209ENST00000488627 SPERTQ8NA61 448 aa13.37□□□□□ -0.27
CTDSP1-209ENST00000488627 HRASLS5Q96KN8 279 aa13.37□□□□□ -0.27
CTDSP1-209ENST00000488627 MNTQ99583 582 aa13.37□□□□□ -0.27
CTDSP1-209ENST00000488627 SLC29A1Q99808 456 aa13.37□□□□□ -0.27
CTDSP1-209ENST00000488627 MROQ9BYG7 248 aa13.37□□□□□ -0.27
CTDSP1-209ENST00000488627 POLR3KQ9Y2Y1 108 aaPredicted RBP13.37□□□□□ -0.27
CTDSP1-209ENST00000488627 ATRQ13535 2644 aa13.37□□□□□ -0.27
CTDSP1-209ENST00000488627 FBN1P35555 2871 aaKnown RBP13.37□□□□□ -0.27
CTDSP1-209ENST00000488627 DYSFO75923 2080 aa13.36□□□□□ -0.27
CTDSP1-209ENST00000488627 ACOD1A6NK06 481 aa13.36□□□□□ -0.27
CTDSP1-209ENST00000488627 LRRC30A6NM36 301 aa13.36□□□□□ -0.27
CTDSP1-209ENST00000488627 ANKRD30BLA7E2S9 258 aa13.36□□□□□ -0.27
CTDSP1-209ENST00000488627 CEACAM18A8MTB9 384 aa13.36□□□□□ -0.27
CTDSP1-209ENST00000488627 MAGEB4O15481 346 aaPredicted RBP13.36□□□□□ -0.27
CTDSP1-209ENST00000488627 PNPP00491 289 aa13.36□□□□□ -0.27
CTDSP1-209ENST00000488627 IFNA2P01563 188 aa13.36□□□□□ -0.27
CTDSP1-209ENST00000488627 IGLV3-1P01715 115 aa13.36□□□□□ -0.27
CTDSP1-209ENST00000488627 CXCR4P61073 352 aa13.36□□□□□ -0.27
CTDSP1-209ENST00000488627 SEC61A1P61619 476 aaKnown RBP13.36□□□□□ -0.27
CTDSP1-209ENST00000488627 GFOD2Q3B7J2 385 aa13.36□□□□□ -0.27
CTDSP1-209ENST00000488627 FAHD2BQ6P2I3 314 aaPredicted RBP13.36□□□□□ -0.27
CTDSP1-209ENST00000488627 ZNF322Q6U7Q0 402 aaPredicted RBP13.36□□□□□ -0.27
CTDSP1-209ENST00000488627 KRT74Q7RTS7 529 aa13.36□□□□□ -0.27
CTDSP1-209ENST00000488627 C11orf53Q8IXP5 236 aa13.36□□□□□ -0.27
CTDSP1-209ENST00000488627 SLC35F2Q8IXU6 374 aa13.36□□□□□ -0.27
CTDSP1-209ENST00000488627 PPP1R14AQ96A00 147 aa13.36□□□□□ -0.27
CTDSP1-209ENST00000488627 EME1Q96AY2 570 aa13.36□□□□□ -0.27
CTDSP1-209ENST00000488627 FAHD2AQ96GK7 314 aa13.36□□□□□ -0.27
CTDSP1-209ENST00000488627 RAB3IPQ96QF0 476 aaPredicted RBP13.36□□□□□ -0.27
CTDSP1-209ENST00000488627 APOL4Q9BPW4 351 aa13.36□□□□□ -0.27
CTDSP1-209ENST00000488627 TMEM246Q9BRR3 403 aa13.36□□□□□ -0.27
CTDSP1-209ENST00000488627 TMPRSS13Q9BYE2 586 aa13.36□□□□□ -0.27
CTDSP1-209ENST00000488627 TTTY10Q9BZA0 68 aa13.36□□□□□ -0.27
CTDSP1-209ENST00000488627 CLN6Q9NWW5 311 aa13.36□□□□□ -0.27
CTDSP1-209ENST00000488627 WARS2Q9UGM6 360 aaKnown RBP13.36□□□□□ -0.27
CTDSP1-209ENST00000488627 TANC2Q9HCD6 1990 aa13.35□□□□□ -0.27
CTDSP1-209ENST00000488627 PPIAL4EA0A075B759 164 aa13.35□□□□□ -0.27
CTDSP1-209ENST00000488627 PPIAL4CA0A0B4J2A2 164 aa13.35□□□□□ -0.27
CTDSP1-209ENST00000488627 A0A0U1RQV5 110 aa13.35□□□□□ -0.27
CTDSP1-209ENST00000488627 TMEM269A0A1B0GVZ9 245 aa13.35□□□□□ -0.27
CTDSP1-209ENST00000488627 PPIAL4DF5H284 164 aa13.35□□□□□ -0.27
CTDSP1-209ENST00000488627 PPIAL4FP0DN26 164 aa13.35□□□□□ -0.27
CTDSP1-209ENST00000488627 LCN2P80188 198 aa13.35□□□□□ -0.27
CTDSP1-209ENST00000488627 MFGE8Q08431 387 aaPredicted RBP13.35□□□□□ -0.27
CTDSP1-209ENST00000488627 ZIK1Q3SY52 487 aaPredicted RBP13.35□□□□□ -0.27
CTDSP1-209ENST00000488627 ZNF404Q494X3 552 aa13.35□□□□□ -0.27
CTDSP1-209ENST00000488627 SLC25A30Q5SVS4 291 aa13.35□□□□□ -0.27
CTDSP1-209ENST00000488627 ZNF826PQ6ZT77 177 aa13.35□□□□□ -0.27
CTDSP1-209ENST00000488627 SSX6Q7RTT6 188 aa13.35□□□□□ -0.27
CTDSP1-209ENST00000488627 C1orf87Q8N0U7 546 aa13.35□□□□□ -0.27
CTDSP1-209ENST00000488627 PQLC1Q8N2U9 271 aa13.35□□□□□ -0.27
CTDSP1-209ENST00000488627 MUC20Q8N307 709 aaPredicted RBP13.35□□□□□ -0.27
CTDSP1-209ENST00000488627 CSNK2A3Q8NEV1 391 aa13.35□□□□□ -0.27
CTDSP1-209ENST00000488627 OR51G2Q8NGK0 314 aa13.35□□□□□ -0.27
CTDSP1-209ENST00000488627 TRUB1Q8WWH5 349 aaKnown RBP13.35□□□□□ -0.27
CTDSP1-209ENST00000488627 MBOAT4Q96T53 435 aa13.35□□□□□ -0.27
CTDSP1-209ENST00000488627 PBOV1Q9GZY1 135 aa13.35□□□□□ -0.27
CTDSP1-209ENST00000488627 FN3KRPQ9HA64 309 aa13.35□□□□□ -0.27
CTDSP1-209ENST00000488627 MMP26Q9NRE1 261 aa13.35□□□□□ -0.27
CTDSP1-209ENST00000488627 RNF7Q9UBF6 113 aa13.35□□□□□ -0.27
CTDSP1-209ENST00000488627 MRM2Q9UI43 246 aaKnown RBP13.35□□□□□ -0.27
CTDSP1-209ENST00000488627 ZNF391Q9UJN7 358 aa13.35□□□□□ -0.27
CTDSP1-209ENST00000488627 PCDHB10Q9UN67 800 aa13.35□□□□□ -0.27
CTDSP1-209ENST00000488627 PPIAL4AQ9Y536 164 aa13.35□□□□□ -0.27
CTDSP1-209ENST00000488627 DNHD1Q96M86 4753 aa13.35□□□□□ -0.27
CTDSP1-209ENST00000488627 A8MXK9 166 aa13.34□□□□□ -0.27
CTDSP1-209ENST00000488627 TRAPPC2LH3BP13 241 aa13.34□□□□□ -0.27
CTDSP1-209ENST00000488627 TNFRSF13BO14836 293 aaPredicted RBP13.34□□□□□ -0.27
CTDSP1-209ENST00000488627 FOXH1O75593 365 aa13.34□□□□□ -0.27
CTDSP1-209ENST00000488627 CST4P01036 141 aa13.34□□□□□ -0.27
CTDSP1-209ENST00000488627 LHBP01229 141 aa13.34□□□□□ -0.27
CTDSP1-209ENST00000488627 GRPP07492 148 aa13.34□□□□□ -0.27
CTDSP1-209ENST00000488627 CPT2P23786 658 aa13.34□□□□□ -0.27
CTDSP1-209ENST00000488627 RIDAP52758 137 aaKnown RBP13.34□□□□□ -0.27
CTDSP1-209ENST00000488627 CDC42P60953 191 aa13.34□□□□□ -0.27
CTDSP1-209ENST00000488627 EGR3Q06889 387 aa13.34□□□□□ -0.27
CTDSP1-209ENST00000488627 TMED1Q13445 227 aa13.34□□□□□ -0.27
CTDSP1-209ENST00000488627 ZNF684Q5T5D7 378 aa13.34□□□□□ -0.27
CTDSP1-209ENST00000488627 OR11L1Q8NGX0 322 aa13.34□□□□□ -0.27
CTDSP1-209ENST00000488627 ITPKCQ96DU7 683 aa13.34□□□□□ -0.27
CTDSP1-209ENST00000488627 FGF23Q9GZV9 251 aaPredicted RBP13.34□□□□□ -0.27
CTDSP1-209ENST00000488627 C14orf119Q9NWQ9 140 aa13.34□□□□□ -0.27
CTDSP1-209ENST00000488627 NUFIP1Q9UHK0 495 aaKnown RBP13.34□□□□□ -0.27
CTDSP1-209ENST00000488627 OPN4Q9UHM6 478 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms