RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 CNN2Q99439 309 aaKnown RBP11.91□□□□□ -0.5
COL9A2-208ENST00000488463 ADAT1Q9BUB4 502 aaKnown RBP11.91□□□□□ -0.5
COL9A2-208ENST00000488463 OR10A2Q9H208 303 aa11.91□□□□□ -0.5
COL9A2-208ENST00000488463 NIPAL2Q9H841 368 aa11.91□□□□□ -0.5
COL9A2-208ENST00000488463 SP140LQ9H930 580 aa11.91□□□□□ -0.5
COL9A2-208ENST00000488463 BRD7Q9NPI1 651 aa11.91□□□□□ -0.5
COL9A2-208ENST00000488463 UBAP1Q9NZ09 502 aa11.91□□□□□ -0.5
COL9A2-208ENST00000488463 LAMP5Q9UJQ1 280 aa11.91□□□□□ -0.5
COL9A2-208ENST00000488463 POLR3KQ9Y2Y1 108 aaPredicted RBP11.91□□□□□ -0.5
COL9A2-208ENST00000488463 SLC22A31A6NKX4 558 aa11.9□□□□□ -0.5
COL9A2-208ENST00000488463 CEACAM18A8MTB9 384 aa11.9□□□□□ -0.5
COL9A2-208ENST00000488463 A8MXK9 166 aa11.9□□□□□ -0.5
COL9A2-208ENST00000488463 PSMD9O00233 223 aa11.9□□□□□ -0.5
COL9A2-208ENST00000488463 EI24O14681 340 aa11.9□□□□□ -0.5
COL9A2-208ENST00000488463 FAM20BO75063 409 aa11.9□□□□□ -0.5
COL9A2-208ENST00000488463 IGLV3-1P01715 115 aa11.9□□□□□ -0.5
COL9A2-208ENST00000488463 WNT2P09544 360 aa11.9□□□□□ -0.5
COL9A2-208ENST00000488463 ANPEPP15144 967 aa11.9□□□□□ -0.5
COL9A2-208ENST00000488463 SRD5A1P18405 259 aa11.9□□□□□ -0.5
COL9A2-208ENST00000488463 DCTDP32321 178 aa11.9□□□□□ -0.5
COL9A2-208ENST00000488463 RIPK1Q13546 671 aa11.9□□□□□ -0.5
COL9A2-208ENST00000488463 TIGD6Q17RP2 521 aa11.9□□□□□ -0.5
COL9A2-208ENST00000488463 KLBQ86Z14 1044 aa11.9□□□□□ -0.5
COL9A2-208ENST00000488463 C11orf53Q8IXP5 236 aa11.9□□□□□ -0.5
COL9A2-208ENST00000488463 ZNF679Q8IYX0 411 aa11.9□□□□□ -0.5
COL9A2-208ENST00000488463 PLPP7Q8NBV4 271 aa11.9□□□□□ -0.5
COL9A2-208ENST00000488463 UBE2FQ969M7 185 aa11.9□□□□□ -0.5
COL9A2-208ENST00000488463 PGAM5Q96HS1 289 aa11.9□□□□□ -0.5
COL9A2-208ENST00000488463 TMPRSS13Q9BYE2 586 aa11.9□□□□□ -0.5
COL9A2-208ENST00000488463 FGF23Q9GZV9 251 aaPredicted RBP11.9□□□□□ -0.5
COL9A2-208ENST00000488463 RIBC2Q9H4K1 309 aa11.9□□□□□ -0.5
COL9A2-208ENST00000488463 RGCCQ9H4X1 137 aa11.9□□□□□ -0.5
COL9A2-208ENST00000488463 RHBDD3Q9Y3P4 386 aa11.9□□□□□ -0.5
COL9A2-208ENST00000488463 PPIAL4EA0A075B759 164 aa11.89□□□□□ -0.51
COL9A2-208ENST00000488463 PPIAL4CA0A0B4J2A2 164 aa11.89□□□□□ -0.51
COL9A2-208ENST00000488463 ACOD1A6NK06 481 aa11.89□□□□□ -0.51
COL9A2-208ENST00000488463 PPIAL4DF5H284 164 aa11.89□□□□□ -0.51
COL9A2-208ENST00000488463 TNFRSF13BO14836 293 aaPredicted RBP11.89□□□□□ -0.51
COL9A2-208ENST00000488463 ZNF254O75437 659 aa11.89□□□□□ -0.51
COL9A2-208ENST00000488463 PNPP00491 289 aa11.89□□□□□ -0.51
COL9A2-208ENST00000488463 PPIAL4FP0DN26 164 aa11.89□□□□□ -0.51
COL9A2-208ENST00000488463 HNF1AP20823 631 aa11.89□□□□□ -0.51
COL9A2-208ENST00000488463 CFL1P23528 166 aaKnown RBP11.89□□□□□ -0.51
COL9A2-208ENST00000488463 HTR1FP30939 366 aa11.89□□□□□ -0.51
COL9A2-208ENST00000488463 ALDH3A2P51648 485 aa11.89□□□□□ -0.51
COL9A2-208ENST00000488463 PAX2Q02962 417 aa11.89□□□□□ -0.51
COL9A2-208ENST00000488463 RCN1Q15293 331 aa11.89□□□□□ -0.51
COL9A2-208ENST00000488463 ZNF404Q494X3 552 aa11.89□□□□□ -0.51
COL9A2-208ENST00000488463 KCTD18Q6PI47 426 aaPredicted RBP11.89□□□□□ -0.51
COL9A2-208ENST00000488463 KRT77Q7Z794 578 aa11.89□□□□□ -0.51
COL9A2-208ENST00000488463 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.89□□□□□ -0.51
COL9A2-208ENST00000488463 GID4Q8IVV7 300 aa11.89□□□□□ -0.51
COL9A2-208ENST00000488463 CBR4Q8N4T8 237 aa11.89□□□□□ -0.51
COL9A2-208ENST00000488463 SPICQ8N5J4 248 aa11.89□□□□□ -0.51
COL9A2-208ENST00000488463 SPERTQ8NA61 448 aa11.89□□□□□ -0.51
COL9A2-208ENST00000488463 OR8J1Q8NGP2 316 aa11.89□□□□□ -0.51
COL9A2-208ENST00000488463 SPATA3Q8NHX4 192 aa11.89□□□□□ -0.51
COL9A2-208ENST00000488463 ASB17Q8WXJ9 295 aa11.89□□□□□ -0.51
COL9A2-208ENST00000488463 PPP1R14AQ96A00 147 aa11.89□□□□□ -0.51
COL9A2-208ENST00000488463 EME1Q96AY2 570 aa11.89□□□□□ -0.51
COL9A2-208ENST00000488463 DACT3Q96B18 629 aaPredicted RBP11.89□□□□□ -0.51
COL9A2-208ENST00000488463 HRASLS5Q96KN8 279 aa11.89□□□□□ -0.51
COL9A2-208ENST00000488463 MBOAT4Q96T53 435 aa11.89□□□□□ -0.51
COL9A2-208ENST00000488463 SLC29A1Q99808 456 aa11.89□□□□□ -0.51
COL9A2-208ENST00000488463 TMEM246Q9BRR3 403 aa11.89□□□□□ -0.51
COL9A2-208ENST00000488463 RASSF4Q9H2L5 321 aa11.89□□□□□ -0.51
COL9A2-208ENST00000488463 UFSP2Q9NUQ7 469 aa11.89□□□□□ -0.51
COL9A2-208ENST00000488463 CLN6Q9NWW5 311 aa11.89□□□□□ -0.51
COL9A2-208ENST00000488463 OPN4Q9UHM6 478 aa11.89□□□□□ -0.51
COL9A2-208ENST00000488463 NOP16Q9Y3C1 178 aaKnown RBP11.89□□□□□ -0.51
COL9A2-208ENST00000488463 TMEM14AQ9Y6G1 99 aa11.89□□□□□ -0.51
COL9A2-208ENST00000488463 A0A0U1RQV5 110 aa11.88□□□□□ -0.51
COL9A2-208ENST00000488463 TRAPPC2LH3BP13 241 aa11.88□□□□□ -0.51
COL9A2-208ENST00000488463 MAGEB4O15481 346 aaPredicted RBP11.88□□□□□ -0.51
COL9A2-208ENST00000488463 FSHBP01225 129 aa11.88□□□□□ -0.51
COL9A2-208ENST00000488463 LHBP01229 141 aa11.88□□□□□ -0.51
COL9A2-208ENST00000488463 PCMT1P22061 227 aa11.88□□□□□ -0.51
COL9A2-208ENST00000488463 CXCR4P61073 352 aa11.88□□□□□ -0.51
COL9A2-208ENST00000488463 LCN2P80188 198 aa11.88□□□□□ -0.51
COL9A2-208ENST00000488463 MFGE8Q08431 387 aaPredicted RBP11.88□□□□□ -0.51
COL9A2-208ENST00000488463 SLC25A30Q5SVS4 291 aa11.88□□□□□ -0.51
COL9A2-208ENST00000488463 ZNF684Q5T5D7 378 aa11.88□□□□□ -0.51
COL9A2-208ENST00000488463 ZNF322Q6U7Q0 402 aaPredicted RBP11.88□□□□□ -0.51
COL9A2-208ENST00000488463 ZNF826PQ6ZT77 177 aa11.88□□□□□ -0.51
COL9A2-208ENST00000488463 SSX6Q7RTT6 188 aa11.88□□□□□ -0.51
COL9A2-208ENST00000488463 SLC35F2Q8IXU6 374 aa11.88□□□□□ -0.51
COL9A2-208ENST00000488463 PQLC1Q8N2U9 271 aa11.88□□□□□ -0.51
COL9A2-208ENST00000488463 MUC20Q8N307 709 aaPredicted RBP11.88□□□□□ -0.51
COL9A2-208ENST00000488463 KLHL36Q8N4N3 616 aa11.88□□□□□ -0.51
COL9A2-208ENST00000488463 ITPKCQ96DU7 683 aa11.88□□□□□ -0.51
COL9A2-208ENST00000488463 MNTQ99583 582 aa11.88□□□□□ -0.51
COL9A2-208ENST00000488463 APOL4Q9BPW4 351 aa11.88□□□□□ -0.51
COL9A2-208ENST00000488463 TTTY10Q9BZA0 68 aa11.88□□□□□ -0.51
COL9A2-208ENST00000488463 VCX3BQ9H321 246 aa11.88□□□□□ -0.51
COL9A2-208ENST00000488463 MMP26Q9NRE1 261 aa11.88□□□□□ -0.51
COL9A2-208ENST00000488463 WARS2Q9UGM6 360 aaKnown RBP11.88□□□□□ -0.51
COL9A2-208ENST00000488463 MRM2Q9UI43 246 aaKnown RBP11.88□□□□□ -0.51
COL9A2-208ENST00000488463 TMEM269A0A1B0GVZ9 245 aa11.87□□□□□ -0.51
COL9A2-208ENST00000488463 LRRC30A6NM36 301 aa11.87□□□□□ -0.51
COL9A2-208ENST00000488463 ANKRD30BLA7E2S9 258 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms