RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 C20orf24Q9BUV8 137 aa12.65□□□□□ -0.38
RER1-207ENST00000488353 CHST5Q9GZS9 411 aa12.65□□□□□ -0.38
RER1-207ENST00000488353 SPACA1Q9HBV2 294 aa12.65□□□□□ -0.38
RER1-207ENST00000488353 GAR1Q9NY12 217 aaKnown RBP12.65□□□□□ -0.38
RER1-207ENST00000488353 PPP4R1LQ9P1A2 415 aa12.65□□□□□ -0.38
RER1-207ENST00000488353 GDF2Q9UK05 429 aaPredicted RBP12.65□□□□□ -0.38
RER1-207ENST00000488353 RAB22AQ9UL26 194 aa12.65□□□□□ -0.38
RER1-207ENST00000488353 THADAQ6YHU6 1953 aa12.65□□□□□ -0.38
RER1-207ENST00000488353 PCDH15Q96QU1 1955 aa12.65□□□□□ -0.38
RER1-207ENST00000488353 RP1P56715 2156 aa12.65□□□□□ -0.38
RER1-207ENST00000488353 A0A1B0GV90 55 aa12.65□□□□□ -0.38
RER1-207ENST00000488353 C17orf51A8MQB3 221 aa12.65□□□□□ -0.38
RER1-207ENST00000488353 ADAP1O75689 374 aa12.65□□□□□ -0.38
RER1-207ENST00000488353 YIF1AO95070 293 aa12.65□□□□□ -0.38
RER1-207ENST00000488353 TSPAN15O95858 294 aa12.65□□□□□ -0.38
RER1-207ENST00000488353 PNPP00491 289 aa12.65□□□□□ -0.38
RER1-207ENST00000488353 ARG1P05089 322 aa12.65□□□□□ -0.38
RER1-207ENST00000488353 ID4P47928 161 aa12.65□□□□□ -0.38
RER1-207ENST00000488353 RPL18Q07020 188 aaKnown RBP12.65□□□□□ -0.38
RER1-207ENST00000488353 MESTQ5EB52 335 aa12.65□□□□□ -0.38
RER1-207ENST00000488353 ATG4DQ86TL0 474 aaPredicted RBP12.65□□□□□ -0.38
RER1-207ENST00000488353 ZNF565Q8N9K5 539 aa12.65□□□□□ -0.38
RER1-207ENST00000488353 DTWD2Q8NBA8 298 aa12.65□□□□□ -0.38
RER1-207ENST00000488353 CHST4Q8NCG5 386 aa12.65□□□□□ -0.38
RER1-207ENST00000488353 PPP1R14AQ96A00 147 aa12.65□□□□□ -0.38
RER1-207ENST00000488353 UCK1Q9HA47 277 aa12.65□□□□□ -0.38
RER1-207ENST00000488353 MMP25Q9NPA2 562 aa12.65□□□□□ -0.38
RER1-207ENST00000488353 SLC2A4RGQ9NR83 387 aa12.65□□□□□ -0.38
RER1-207ENST00000488353 TMEM184BQ9Y519 407 aaPredicted RBP12.65□□□□□ -0.38
RER1-207ENST00000488353 SPAG17Q6Q759 2223 aa12.65□□□□□ -0.38
RER1-207ENST00000488353 JTBO76095 146 aa12.64□□□□□ -0.39
RER1-207ENST00000488353 RAB1AP62820 205 aa12.64□□□□□ -0.39
RER1-207ENST00000488353 RAB32Q13637 225 aa12.64□□□□□ -0.39
RER1-207ENST00000488353 ZNF239Q16600 458 aaKnown RBP12.64□□□□□ -0.39
RER1-207ENST00000488353 C1orf100Q5SVJ3 147 aa12.64□□□□□ -0.39
RER1-207ENST00000488353 TMEM268Q5VZI3 342 aa12.64□□□□□ -0.39
RER1-207ENST00000488353 HIST2H3AQ71DI3 136 aa12.64□□□□□ -0.39
RER1-207ENST00000488353 ZNF615Q8N8J6 731 aa12.64□□□□□ -0.39
RER1-207ENST00000488353 OR51A2Q8NGJ7 313 aa12.64□□□□□ -0.39
RER1-207ENST00000488353 TERB2Q8NHR7 220 aa12.64□□□□□ -0.39
RER1-207ENST00000488353 CPNE4Q96A23 557 aaPredicted RBP12.64□□□□□ -0.39
RER1-207ENST00000488353 TSPAN32Q96QS1 320 aa12.64□□□□□ -0.39
RER1-207ENST00000488353 PARPBPQ9NWS1 579 aa12.64□□□□□ -0.39
RER1-207ENST00000488353 GFOD1Q9NXC2 390 aa12.64□□□□□ -0.39
RER1-207ENST00000488353 WIPF3A6NGB9 483 aa12.64□□□□□ -0.39
RER1-207ENST00000488353 C11orf98E9PRG8 122 aa12.64□□□□□ -0.39
RER1-207ENST00000488353 SFT2D2O95562 160 aa12.64□□□□□ -0.39
RER1-207ENST00000488353 CD63P08962 238 aa12.64□□□□□ -0.39
RER1-207ENST00000488353 BTF3P20290 206 aaKnown RBP12.64□□□□□ -0.39
RER1-207ENST00000488353 CD38P28907 300 aa12.64□□□□□ -0.39
RER1-207ENST00000488353 SNCAP37840 140 aa12.64□□□□□ -0.39
RER1-207ENST00000488353 RBP2P50120 134 aa12.64□□□□□ -0.39
RER1-207ENST00000488353 RIDAP52758 137 aaKnown RBP12.64□□□□□ -0.39
RER1-207ENST00000488353 SPOCK1Q08629 439 aa12.64□□□□□ -0.39
RER1-207ENST00000488353 KIAA0141Q14154 515 aaPredicted RBP12.64□□□□□ -0.39
RER1-207ENST00000488353 PRTGQ2VWP7 1150 aa12.64□□□□□ -0.39
RER1-207ENST00000488353 DEFB133Q30KQ1 61 aa12.64□□□□□ -0.39
RER1-207ENST00000488353 MAMDC2Q7Z304 686 aaPredicted RBP12.64□□□□□ -0.39
RER1-207ENST00000488353 GKN2Q86XP6 184 aa12.64□□□□□ -0.39
RER1-207ENST00000488353 C2orf50Q96LR7 162 aa12.64□□□□□ -0.39
RER1-207ENST00000488353 NRSN2Q9GZP1 204 aa12.64□□□□□ -0.39
RER1-207ENST00000488353 RAB33BQ9H082 229 aa12.64□□□□□ -0.39
RER1-207ENST00000488353 METTL8Q9H825 291 aaKnown RBP12.64□□□□□ -0.39
RER1-207ENST00000488353 PNO1Q9NRX1 252 aaKnown RBP12.64□□□□□ -0.39
RER1-207ENST00000488353 LOC390937A0A1W2PQ73 354 aa12.63□□□□□ -0.39
RER1-207ENST00000488353 C17orf105B2RV13 164 aa12.63□□□□□ -0.39
RER1-207ENST00000488353 DNASE1L1P49184 302 aa12.63□□□□□ -0.39
RER1-207ENST00000488353 GFERP55789 205 aa12.63□□□□□ -0.39
RER1-207ENST00000488353 FUT7Q11130 342 aa12.63□□□□□ -0.39
RER1-207ENST00000488353 GUK1Q16774 197 aa12.63□□□□□ -0.39
RER1-207ENST00000488353 C1QL3Q5VWW1 255 aa12.63□□□□□ -0.39
RER1-207ENST00000488353 CLEC18BQ6UXF7 455 aa12.63□□□□□ -0.39
RER1-207ENST00000488353 SLC35D2Q76EJ3 337 aa12.63□□□□□ -0.39
RER1-207ENST00000488353 OR9K2Q8NGE7 335 aa12.63□□□□□ -0.39
RER1-207ENST00000488353 OR51F2Q8NH61 342 aa12.63□□□□□ -0.39
RER1-207ENST00000488353 TAAR8Q969N4 342 aa12.63□□□□□ -0.39
RER1-207ENST00000488353 FAM46BQ96A09 425 aa12.63□□□□□ -0.39
RER1-207ENST00000488353 CCNL2Q96S94 520 aaPredicted RBP12.63□□□□□ -0.39
RER1-207ENST00000488353 SLC26A1Q9H2B4 701 aa12.63□□□□□ -0.39
RER1-207ENST00000488353 PLA2G2EQ9NZK7 142 aa12.63□□□□□ -0.39
RER1-207ENST00000488353 FLVCR1Q9Y5Y0 555 aa12.63□□□□□ -0.39
RER1-207ENST00000488353 ZNF217O75362 1048 aa12.63□□□□□ -0.39
RER1-207ENST00000488353 HLA-DQA2P01906 255 aa12.63□□□□□ -0.39
RER1-207ENST00000488353 PMP2P02689 132 aa12.63□□□□□ -0.39
RER1-207ENST00000488353 GAPDHP04406 335 aaKnown RBP12.63□□□□□ -0.39
RER1-207ENST00000488353 ASAH2BP0C7U1 165 aa12.63□□□□□ -0.39
RER1-207ENST00000488353 PNMTP11086 282 aa12.63□□□□□ -0.39
RER1-207ENST00000488353 HIST1H1BP16401 226 aaKnown RBP12.63□□□□□ -0.39
RER1-207ENST00000488353 SKP2Q13309 424 aa12.63□□□□□ -0.39
RER1-207ENST00000488353 SLC9A3R2Q15599 337 aa12.63□□□□□ -0.39
RER1-207ENST00000488353 BEND4Q6ZU67 534 aa12.63□□□□□ -0.39
RER1-207ENST00000488353 ARRDC1Q8N5I2 433 aa12.63□□□□□ -0.39
RER1-207ENST00000488353 NKAIN3Q8N8D7 197 aa12.63□□□□□ -0.39
RER1-207ENST00000488353 OR4D6Q8NGJ1 314 aa12.63□□□□□ -0.39
RER1-207ENST00000488353 OR4K15Q8NH41 348 aa12.63□□□□□ -0.39
RER1-207ENST00000488353 CMBLQ96DG6 245 aa12.63□□□□□ -0.39
RER1-207ENST00000488353 S100A13Q99584 98 aa12.63□□□□□ -0.39
RER1-207ENST00000488353 RTN4RQ9BZR6 473 aa12.63□□□□□ -0.39
RER1-207ENST00000488353 UBQLN4Q9NRR5 601 aa12.63□□□□□ -0.39
RER1-207ENST00000488353 GPR132Q9UNW8 380 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms