RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 LYARQ9NX58 379 aaKnown RBP1.01□□□□□ -2.25
SMC4-220ENST00000488017 PDP1Q9P0J1 537 aaPredicted RBP1.01□□□□□ -2.25
SMC4-220ENST00000488017 ZNF230Q9UIE0 474 aaPredicted RBP1.01□□□□□ -2.25
SMC4-220ENST00000488017 RCL1Q9Y2P8 373 aaKnown RBP1.01□□□□□ -2.25
SMC4-220ENST00000488017 PCNX2A6NKB5 2137 aa1.01□□□□□ -2.25
SMC4-220ENST00000488017 MYH7P12883 1935 aa1.01□□□□□ -2.25
SMC4-220ENST00000488017 DICER1Q9UPY3 1922 aaKnown RBP1.01□□□□□ -2.25
SMC4-220ENST00000488017 KIAA1671Q9BY89 1806 aa1.01□□□□□ -2.25
SMC4-220ENST00000488017 AKAP12Q02952 1782 aa1.01□□□□□ -2.25
SMC4-220ENST00000488017 MROH7Q68CQ1 1323 aa1□□□□□ -2.25
SMC4-220ENST00000488017 TRIP11Q15643 1979 aa1□□□□□ -2.25
SMC4-220ENST00000488017 IGHV3OR16-9A0A0B4J2B5 98 aa1□□□□□ -2.25
SMC4-220ENST00000488017 IGHV1-3A0A0C4DH29 117 aa1□□□□□ -2.25
SMC4-220ENST00000488017 TSPAN11A1L157 253 aa1□□□□□ -2.25
SMC4-220ENST00000488017 CTAGE15A4D2H0 777 aa1□□□□□ -2.25
SMC4-220ENST00000488017 A6NDN8 102 aa1□□□□□ -2.25
SMC4-220ENST00000488017 CEACAM18A8MTB9 384 aa1□□□□□ -2.25
SMC4-220ENST00000488017 FAM25EA8MYX2 175 aa1□□□□□ -2.25
SMC4-220ENST00000488017 H7C0C1 242 aa1□□□□□ -2.25
SMC4-220ENST00000488017 M0R3G1 203 aa1□□□□□ -2.25
SMC4-220ENST00000488017 PLIN3O60664 434 aa1□□□□□ -2.25
SMC4-220ENST00000488017 HMMRO75330 724 aa1□□□□□ -2.25
SMC4-220ENST00000488017 TGM6O95932 706 aa1□□□□□ -2.25
SMC4-220ENST00000488017 HPRT1P00492 218 aa1□□□□□ -2.25
SMC4-220ENST00000488017 AGTP01019 485 aa1□□□□□ -2.25
SMC4-220ENST00000488017 KRT14P02533 472 aa1□□□□□ -2.25
SMC4-220ENST00000488017 RPN2P04844 631 aa1□□□□□ -2.25
SMC4-220ENST00000488017 ERCC1P07992 297 aaPredicted RBP1□□□□□ -2.25
SMC4-220ENST00000488017 SFTPCP11686 197 aa1□□□□□ -2.25
SMC4-220ENST00000488017 NEFHP12036 1026 aa1□□□□□ -2.25
SMC4-220ENST00000488017 RAB4AP20338 218 aa1□□□□□ -2.25
SMC4-220ENST00000488017 STOMP27105 288 aa1□□□□□ -2.25
SMC4-220ENST00000488017 GGT2P36268 569 aa1□□□□□ -2.25
SMC4-220ENST00000488017 TGFBR1P36897 503 aa1□□□□□ -2.25
SMC4-220ENST00000488017 ANP32AP39687 249 aaKnown RBP1□□□□□ -2.25
SMC4-220ENST00000488017 MYCNOSP40205 109 aa1□□□□□ -2.25
SMC4-220ENST00000488017 TNFSF9P41273 254 aa1□□□□□ -2.25
SMC4-220ENST00000488017 ATP5OP48047 213 aa1□□□□□ -2.25
SMC4-220ENST00000488017 RAB9AP51151 201 aa1□□□□□ -2.25
SMC4-220ENST00000488017 RPS15AP62244 130 aaKnown RBP1□□□□□ -2.25
SMC4-220ENST00000488017 ELF3P78545 371 aaPredicted RBP1□□□□□ -2.25
SMC4-220ENST00000488017 PPIDQ08752 370 aaKnown RBP1□□□□□ -2.25
SMC4-220ENST00000488017 ZNF829Q3KNS6 432 aaPredicted RBP1□□□□□ -2.25
SMC4-220ENST00000488017 SLC25A35Q3KQZ1 300 aa1□□□□□ -2.25
SMC4-220ENST00000488017 KLHL12Q53G59 568 aa1□□□□□ -2.25
SMC4-220ENST00000488017 HSP90B2PQ58FF3 399 aa1□□□□□ -2.25
SMC4-220ENST00000488017 TWF2Q6IBS0 349 aaKnown RBP1□□□□□ -2.25
SMC4-220ENST00000488017 H3F3CQ6NXT2 135 aa1□□□□□ -2.25
SMC4-220ENST00000488017 OTUD6AQ7L8S5 288 aa1□□□□□ -2.25
SMC4-220ENST00000488017 CTAGE6Q86UF2 777 aa1□□□□□ -2.25
SMC4-220ENST00000488017 MDP1Q86V88 176 aa1□□□□□ -2.25
SMC4-220ENST00000488017 HORMAD1Q86X24 394 aa1□□□□□ -2.25
SMC4-220ENST00000488017 STK40Q8N2I9 435 aa1□□□□□ -2.25
SMC4-220ENST00000488017 BBS5Q8N3I7 341 aa1□□□□□ -2.25
SMC4-220ENST00000488017 PQLC3Q8N755 202 aa1□□□□□ -2.25
SMC4-220ENST00000488017 FAM184AQ8NB25 1140 aa1□□□□□ -2.25
SMC4-220ENST00000488017 TMEM104Q8NE00 496 aa1□□□□□ -2.25
SMC4-220ENST00000488017 OR10W1Q8NGF6 305 aa1□□□□□ -2.25
SMC4-220ENST00000488017 OR5M1Q8NGP8 315 aa1□□□□□ -2.25
SMC4-220ENST00000488017 RXFP4Q8TDU9 374 aa1□□□□□ -2.25
SMC4-220ENST00000488017 ZNF75CPQ92670 426 aaPredicted RBP1□□□□□ -2.25
SMC4-220ENST00000488017 SLC35B4Q969S0 331 aa1□□□□□ -2.25
SMC4-220ENST00000488017 MCUR1Q96AQ8 359 aa1□□□□□ -2.25
SMC4-220ENST00000488017 RPEQ96AT9 228 aa1□□□□□ -2.25
SMC4-220ENST00000488017 KCNS1Q96KK3 526 aa1□□□□□ -2.25
SMC4-220ENST00000488017 BTN2A3PQ96KV6 586 aa1□□□□□ -2.25
SMC4-220ENST00000488017 ZFP3Q96NJ6 502 aa1□□□□□ -2.25
SMC4-220ENST00000488017 GSDMAQ96QA5 445 aa1□□□□□ -2.25
SMC4-220ENST00000488017 SHANK2-AS3Q9BTD1 123 aa1□□□□□ -2.25
SMC4-220ENST00000488017 NUDT9Q9BW91 350 aa1□□□□□ -2.25
SMC4-220ENST00000488017 CCNB1IP1Q9NPC3 277 aa1□□□□□ -2.25
SMC4-220ENST00000488017 CLN6Q9NWW5 311 aa1□□□□□ -2.25
SMC4-220ENST00000488017 ZMAT5Q9UDW3 170 aaKnown RBP1□□□□□ -2.25
SMC4-220ENST00000488017 SIGLEC7Q9Y286 467 aa1□□□□□ -2.25
SMC4-220ENST00000488017 NOSIPQ9Y314 301 aaKnown RBP1□□□□□ -2.25
SMC4-220ENST00000488017 TIMM22Q9Y584 194 aa1□□□□□ -2.25
SMC4-220ENST00000488017 ZSWIM8A7E2V4 1837 aa1□□□□□ -2.25
SMC4-220ENST00000488017 LTBP4Q8N2S1 1624 aa1□□□□□ -2.25
SMC4-220ENST00000488017 BAZ2AQ9UIF9 1905 aaKnown RBP0.99□□□□□ -2.25
SMC4-220ENST00000488017 NSD2O96028 1365 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 A0A075B6Q4 140 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 KCNE1BA0A087WTH5 132 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 KBTBD11-OT1A0A1B0GTJ5 212 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 LINC00854A0A1B0GVQ3 168 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 A0A1W2PNN7 141 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 TAAR5O14804 337 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 BCKDKO14874 412 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 SLC19A2O60779 497 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 DNAJB6O75190 326 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 FGFR1OPO95684 399 aaKnown RBP0.99□□□□□ -2.25
SMC4-220ENST00000488017 LHBP01229 141 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 IGLV2-8P01709 118 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 MT-ND4P03905 459 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 GLAP06280 429 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 TPM3P06753 285 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 CD28P10747 220 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 NTF3P20783 257 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 GSTM3P21266 225 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 PRKACBP22694 351 aa0.99□□□□□ -2.25
SMC4-220ENST00000488017 PSMB5P28074 263 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms