RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 FABP6P51161 128 aa0.85□□□□□ -2.27
SMC4-219ENST00000487747 TAS2R46P59540 309 aa0.85□□□□□ -2.27
SMC4-219ENST00000487747 ART3Q13508 389 aa0.85□□□□□ -2.27
SMC4-219ENST00000487747 ZNF266Q14584 549 aa0.85□□□□□ -2.27
SMC4-219ENST00000487747 LUZP6Q538Z0 58 aa0.85□□□□□ -2.27
SMC4-219ENST00000487747 GCSAMLQ5JQS6 135 aa0.85□□□□□ -2.27
SMC4-219ENST00000487747 NANOGNBQ7Z5D8 188 aa0.85□□□□□ -2.27
SMC4-219ENST00000487747 SCD5Q86SK9 330 aa0.85□□□□□ -2.27
SMC4-219ENST00000487747 SLC22A9Q8IVM8 553 aa0.85□□□□□ -2.27
SMC4-219ENST00000487747 OR52N1Q8NH53 320 aa0.85□□□□□ -2.27
SMC4-219ENST00000487747 LYPD6BQ8NI32 183 aa0.85□□□□□ -2.27
SMC4-219ENST00000487747 ENKURQ8TC29 256 aa0.85□□□□□ -2.27
SMC4-219ENST00000487747 GHSRQ92847 366 aa0.85□□□□□ -2.27
SMC4-219ENST00000487747 RASD2Q96D21 266 aa0.85□□□□□ -2.27
SMC4-219ENST00000487747 TPD52L3Q96J77 140 aa0.85□□□□□ -2.27
SMC4-219ENST00000487747 GPR82Q96P67 336 aa0.85□□□□□ -2.27
SMC4-219ENST00000487747 OR4K3Q96R72 315 aa0.85□□□□□ -2.27
SMC4-219ENST00000487747 MARVELD1Q9BSK0 173 aa0.85□□□□□ -2.27
SMC4-219ENST00000487747 NUP58Q9BVL2 599 aa0.85□□□□□ -2.27
SMC4-219ENST00000487747 NUDT9Q9BW91 350 aa0.85□□□□□ -2.27
SMC4-219ENST00000487747 ANKRA2Q9H9E1 313 aa0.85□□□□□ -2.27
SMC4-219ENST00000487747 RETNQ9HD89 108 aa0.85□□□□□ -2.27
SMC4-219ENST00000487747 CLN6Q9NWW5 311 aa0.85□□□□□ -2.27
SMC4-219ENST00000487747 DCAF16Q9NXF7 216 aa0.85□□□□□ -2.27
SMC4-219ENST00000487747 MCTS1Q9ULC4 181 aaKnown RBP0.85□□□□□ -2.27
SMC4-219ENST00000487747 TMCC3Q9ULS5 477 aa0.85□□□□□ -2.27
SMC4-219ENST00000487747 YARS2Q9Y2Z4 477 aaKnown RBP0.85□□□□□ -2.27
SMC4-219ENST00000487747 LRRC42Q9Y546 428 aa0.85□□□□□ -2.27
SMC4-219ENST00000487747 SIGLEC1Q9BZZ2 1709 aa0.84□□□□□ -2.27
SMC4-219ENST00000487747 CCL15-CCL14A0A0B4J2E2 113 aa0.84□□□□□ -2.27
SMC4-219ENST00000487747 XKRY2A2RUG3 117 aa0.84□□□□□ -2.27
SMC4-219ENST00000487747 GOLGA6L4A6NEF3 574 aa0.84□□□□□ -2.27
SMC4-219ENST00000487747 SMCO2A6NFE2 343 aa0.84□□□□□ -2.27
SMC4-219ENST00000487747 SYCE1LA8MT33 242 aa0.84□□□□□ -2.27
SMC4-219ENST00000487747 C9JVG2 144 aa0.84□□□□□ -2.27
SMC4-219ENST00000487747 M0R3G1 203 aa0.84□□□□□ -2.27
SMC4-219ENST00000487747 GABRPO00591 440 aa0.84□□□□□ -2.27
SMC4-219ENST00000487747 EIF3HO15372 352 aaKnown RBP eCLIP0.84□□□□□ -2.27
SMC4-219ENST00000487747 HBE1P02100 147 aa0.84□□□□□ -2.27
SMC4-219ENST00000487747 FTH1P02794 183 aa0.84□□□□□ -2.27
SMC4-219ENST00000487747 RPN2P04844 631 aa0.84□□□□□ -2.27
SMC4-219ENST00000487747 TROVE2P10155 538 aaKnown RBP eCLIP0.84□□□□□ -2.271e-12■■■■■ 61.2
SMC4-219ENST00000487747 CTRB1P17538 263 aa0.84□□□□□ -2.27
SMC4-219ENST00000487747 MYCNOSP40205 109 aa0.84□□□□□ -2.27
SMC4-219ENST00000487747 MRPL19P49406 292 aaKnown RBP0.84□□□□□ -2.27
SMC4-219ENST00000487747 CCL15Q16663 113 aa0.84□□□□□ -2.27
SMC4-219ENST00000487747 HSP90AB3PQ58FF7 597 aa0.84□□□□□ -2.27
SMC4-219ENST00000487747 FAM104BQ5XKR9 115 aa0.84□□□□□ -2.27
SMC4-219ENST00000487747 TTC23LQ6PF05 361 aa0.84□□□□□ -2.27
SMC4-219ENST00000487747 SPESP1Q6UW49 350 aa0.84□□□□□ -2.27
SMC4-219ENST00000487747 CD300LGQ6UXG3 332 aa0.84□□□□□ -2.27
SMC4-219ENST00000487747 C12orf54Q6X4T0 127 aa0.84□□□□□ -2.27
SMC4-219ENST00000487747 DRAM1Q8N682 238 aa0.84□□□□□ -2.27
SMC4-219ENST00000487747 OR4C5Q8NGB2 326 aa0.84□□□□□ -2.27
SMC4-219ENST00000487747 OR9G4Q8NGQ1 327 aa0.84□□□□□ -2.27
SMC4-219ENST00000487747 AKR7LQ8NHP1 331 aa0.84□□□□□ -2.27
SMC4-219ENST00000487747 RXFP4Q8TDU9 374 aa0.84□□□□□ -2.27
SMC4-219ENST00000487747 RPEQ96AT9 228 aa0.84□□□□□ -2.27
SMC4-219ENST00000487747 ECHDC3Q96DC8 303 aa0.84□□□□□ -2.27
SMC4-219ENST00000487747 ACTR3CQ9C0K3 210 aaPredicted RBP0.84□□□□□ -2.27
SMC4-219ENST00000487747 TRIM45Q9H8W5 580 aaPredicted RBP0.84□□□□□ -2.27
SMC4-219ENST00000487747 RGS18Q9NS28 235 aa0.84□□□□□ -2.27
SMC4-219ENST00000487747 SLC39A1Q9NY26 324 aa0.84□□□□□ -2.27
SMC4-219ENST00000487747 PITPNC1Q9UKF7 332 aa0.84□□□□□ -2.27
SMC4-219ENST00000487747 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP0.83□□□□□ -2.283e-9■■■■■ 74.3
SMC4-219ENST00000487747 C2orf16Q68DN1 1984 aa0.83□□□□□ -2.28
SMC4-219ENST00000487747 MYO9BQ13459 2157 aa0.83□□□□□ -2.28
SMC4-219ENST00000487747 NOTCH1P46531 2555 aa0.83□□□□□ -2.28
SMC4-219ENST00000487747 SMCO3A2RU48 225 aa0.83□□□□□ -2.28
SMC4-219ENST00000487747 H7C0C1 242 aa0.83□□□□□ -2.28
SMC4-219ENST00000487747 AP3B1O00203 1094 aa0.83□□□□□ -2.28
SMC4-219ENST00000487747 ERI3O43414 337 aaKnown RBP0.83□□□□□ -2.28
SMC4-219ENST00000487747 RNF13O43567 381 aa0.83□□□□□ -2.28
SMC4-219ENST00000487747 HUS1O60921 280 aa0.83□□□□□ -2.28
SMC4-219ENST00000487747 SCELO95171 688 aa0.83□□□□□ -2.28
SMC4-219ENST00000487747 CD160O95971 181 aa0.83□□□□□ -2.28
SMC4-219ENST00000487747 BCKDHBP21953 392 aa0.83□□□□□ -2.28
SMC4-219ENST00000487747 PRKACBP22694 351 aa0.83□□□□□ -2.28
SMC4-219ENST00000487747 PPICP45877 212 aa0.83□□□□□ -2.28
SMC4-219ENST00000487747 ATP5OP48047 213 aa0.83□□□□□ -2.28
SMC4-219ENST00000487747 TGM4P49221 684 aa0.83□□□□□ -2.28
SMC4-219ENST00000487747 TAS2R43P59537 309 aa0.83□□□□□ -2.28
SMC4-219ENST00000487747 IFITM3Q01628 133 aa0.83□□□□□ -2.28
SMC4-219ENST00000487747 LIPEQ05469 1076 aa0.83□□□□□ -2.28
SMC4-219ENST00000487747 BTN1A1Q13410 526 aa0.83□□□□□ -2.28
SMC4-219ENST00000487747 ZNF181Q2M3W8 571 aa0.83□□□□□ -2.28
SMC4-219ENST00000487747 ZNF829Q3KNS6 432 aaPredicted RBP0.83□□□□□ -2.28
SMC4-219ENST00000487747 LRRC66Q68CR7 880 aa0.83□□□□□ -2.28
SMC4-219ENST00000487747 APOBEC3HQ6NTF7 200 aaKnown RBP0.83□□□□□ -2.28
SMC4-219ENST00000487747 OPN5Q6U736 354 aa0.83□□□□□ -2.28
SMC4-219ENST00000487747 TAS2R42Q7RTR8 314 aa0.83□□□□□ -2.28
SMC4-219ENST00000487747 DAZ4Q86SG3 579 aaKnown RBP0.83□□□□□ -2.28
SMC4-219ENST00000487747 MDP1Q86V88 176 aa0.83□□□□□ -2.28
SMC4-219ENST00000487747 HORMAD1Q86X24 394 aa0.83□□□□□ -2.28
SMC4-219ENST00000487747 SLC25A29Q8N8R3 303 aa0.83□□□□□ -2.28
SMC4-219ENST00000487747 SNX31Q8N9S9 440 aa0.83□□□□□ -2.28
SMC4-219ENST00000487747 BPIFCQ8NFQ6 507 aa0.83□□□□□ -2.28
SMC4-219ENST00000487747 OR5AR1Q8NGP9 310 aa0.83□□□□□ -2.28
SMC4-219ENST00000487747 NRGNQ92686 78 aa0.83□□□□□ -2.28
SMC4-219ENST00000487747 C8orf44Q96CB5 159 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms