RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 TEX30Q5JUR7 227 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 AADACL4Q5VUY2 407 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 TTC19Q6DKK2 380 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 CLEC2AQ6UVW9 174 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 CD300LGQ6UXG3 332 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 PDCL2Q8N4E4 241 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 ZNF321PQ8N8H1 164 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 APCDD1LQ8NCL9 501 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 GPR26Q8NDV2 337 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 OR52E5Q8NH55 327 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 ENKURQ8TC29 256 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 RXFP4Q8TDU9 374 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 GPX8Q8TED1 209 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 CA5BP1Q8WTZ4 195 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 GLYATL2Q8WU03 294 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 ASZ1Q8WWH4 475 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 CDS1Q92903 461 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 APH1AQ96BI3 265 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 ZNF317Q96PQ6 595 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 CDX2Q99626 313 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 BCL7BQ9BQE9 202 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 TIMM29Q9BSF4 260 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 TMEM243Q9BU79 118 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 GGTLC1Q9BX51 225 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 ING2Q9H160 280 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 LYRM4Q9HD34 91 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 C21orf62Q9NYP8 219 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 SLC17A7Q9P2U7 560 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 DDX19BQ9UMR2 479 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 YARS2Q9Y2Z4 477 aaKnown RBP2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 CAMTA1Q9Y6Y1 1673 aa2.14□□□□□ -2.07
HMGB1P36-201ENST00000487709 INSRP06213 1382 aa2.13□□□□□ -2.07
HMGB1P36-201ENST00000487709 CENPXA8MT69 81 aa2.13□□□□□ -2.07
HMGB1P36-201ENST00000487709 RPL36A-HNRNPH2H7BZ11 118 aa2.13□□□□□ -2.07
HMGB1P36-201ENST00000487709 POLR1CO15160 346 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P36-201ENST00000487709 CTAG2O75638 210 aa2.13□□□□□ -2.07
HMGB1P36-201ENST00000487709 TDP2O95551 362 aa2.13□□□□□ -2.07
HMGB1P36-201ENST00000487709 DCNP07585 359 aaKnown RBP2.13□□□□□ -2.07
HMGB1P36-201ENST00000487709 PGA4P0DJD7 388 aa2.13□□□□□ -2.07
HMGB1P36-201ENST00000487709 PGA3P0DJD8 388 aa2.13□□□□□ -2.07
HMGB1P36-201ENST00000487709 PGA5P0DJD9 388 aa2.13□□□□□ -2.07
HMGB1P36-201ENST00000487709 CD82P27701 267 aa2.13□□□□□ -2.07
HMGB1P36-201ENST00000487709 NUP62P37198 522 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P36-201ENST00000487709 PRLHRP49683 370 aa2.13□□□□□ -2.07
HMGB1P36-201ENST00000487709 UBE2E1P51965 193 aa2.13□□□□□ -2.07
HMGB1P36-201ENST00000487709 CARD18P57730 90 aa2.13□□□□□ -2.07
HMGB1P36-201ENST00000487709 UBE2MP61081 183 aaKnown RBP2.13□□□□□ -2.07
HMGB1P36-201ENST00000487709 SPAG1Q07617 926 aa2.13□□□□□ -2.07
HMGB1P36-201ENST00000487709 ILKQ13418 452 aa2.13□□□□□ -2.07
HMGB1P36-201ENST00000487709 DOC2AQ14183 400 aa2.13□□□□□ -2.07
HMGB1P36-201ENST00000487709 DMC1Q14565 340 aa2.13□□□□□ -2.07
HMGB1P36-201ENST00000487709 RNASE13Q5GAN3 156 aaKnown RBP2.13□□□□□ -2.07
HMGB1P36-201ENST00000487709 ULK3Q6PHR2 472 aa2.13□□□□□ -2.07
HMGB1P36-201ENST00000487709 Q6ZSR6 202 aa2.13□□□□□ -2.07
HMGB1P36-201ENST00000487709 CALHM3Q86XJ0 350 aa2.13□□□□□ -2.07
HMGB1P36-201ENST00000487709 OR56A4Q8NGH8 313 aa2.13□□□□□ -2.07
HMGB1P36-201ENST00000487709 OR8K3Q8NH51 312 aa2.13□□□□□ -2.07
HMGB1P36-201ENST00000487709 OR1S1Q8NH92 325 aa2.13□□□□□ -2.07
HMGB1P36-201ENST00000487709 C17orf50Q8WW18 174 aa2.13□□□□□ -2.07
HMGB1P36-201ENST00000487709 ESR2Q92731 530 aa2.13□□□□□ -2.07
HMGB1P36-201ENST00000487709 COL21A1Q96P44 957 aa2.13□□□□□ -2.07
HMGB1P36-201ENST00000487709 CSPG4P5Q96PW8 444 aa2.13□□□□□ -2.07
HMGB1P36-201ENST00000487709 SCRT1Q9BWW7 348 aa2.13□□□□□ -2.07
HMGB1P36-201ENST00000487709 ULBP2Q9BZM5 246 aa2.13□□□□□ -2.07
HMGB1P36-201ENST00000487709 NEUROG2Q9H2A3 272 aa2.13□□□□□ -2.07
HMGB1P36-201ENST00000487709 XKR8Q9H6D3 395 aa2.13□□□□□ -2.07
HMGB1P36-201ENST00000487709 C8orf17Q9NRJ1 99 aa2.13□□□□□ -2.07
HMGB1P36-201ENST00000487709 ZNHIT6Q9NWK9 470 aaKnown RBP2.13□□□□□ -2.07
HMGB1P36-201ENST00000487709 IGHV1-3A0A0C4DH29 117 aa2.12□□□□□ -2.07
HMGB1P36-201ENST00000487709 A0A1B0GTQ1 180 aa2.12□□□□□ -2.07
HMGB1P36-201ENST00000487709 LINC00854A0A1B0GVQ3 168 aa2.12□□□□□ -2.07
HMGB1P36-201ENST00000487709 TEX46H3BTG2 121 aa2.12□□□□□ -2.07
HMGB1P36-201ENST00000487709 MYL12BO14950 172 aa2.12□□□□□ -2.07
HMGB1P36-201ENST00000487709 POLR3GO15318 223 aaPredicted RBP2.12□□□□□ -2.07
HMGB1P36-201ENST00000487709 NMT2O60551 498 aa2.12□□□□□ -2.07
HMGB1P36-201ENST00000487709 UPK1BO75841 260 aa2.12□□□□□ -2.07
HMGB1P36-201ENST00000487709 OTCP00480 354 aa2.12□□□□□ -2.07
HMGB1P36-201ENST00000487709 TCP1P17987 556 aaKnown RBP2.12□□□□□ -2.07
HMGB1P36-201ENST00000487709 OR1G1P47890 313 aa2.12□□□□□ -2.07
HMGB1P36-201ENST00000487709 RAB11AP62491 216 aa2.12□□□□□ -2.07
HMGB1P36-201ENST00000487709 SIGLEC14Q08ET2 396 aa2.12□□□□□ -2.07
HMGB1P36-201ENST00000487709 TRDNQ13061 729 aa2.12□□□□□ -2.07
HMGB1P36-201ENST00000487709 SLC39A6Q13433 755 aa2.12□□□□□ -2.07
HMGB1P36-201ENST00000487709 RAB11BQ15907 218 aa2.12□□□□□ -2.07
HMGB1P36-201ENST00000487709 HSP90B2PQ58FF3 399 aa2.12□□□□□ -2.07
HMGB1P36-201ENST00000487709 FBXO48Q5FWF7 155 aa2.12□□□□□ -2.07
HMGB1P36-201ENST00000487709 MLIPQ5VWP3 458 aa2.12□□□□□ -2.07
HMGB1P36-201ENST00000487709 MFSD14CQ5VZR4 134 aa2.12□□□□□ -2.07
HMGB1P36-201ENST00000487709 OPN5Q6U736 354 aa2.12□□□□□ -2.07
HMGB1P36-201ENST00000487709 CASP12Q6UXS9 341 aa2.12□□□□□ -2.07
HMGB1P36-201ENST00000487709 SLC30A8Q8IWU4 369 aa2.12□□□□□ -2.07
HMGB1P36-201ENST00000487709 PROKR2Q8NFJ6 384 aa2.12□□□□□ -2.07
HMGB1P36-201ENST00000487709 OR4M1Q8NGD0 313 aa2.12□□□□□ -2.07
HMGB1P36-201ENST00000487709 OR51F2Q8NH61 342 aa2.12□□□□□ -2.07
HMGB1P36-201ENST00000487709 DCAKDQ8WVC6 231 aa2.12□□□□□ -2.07
HMGB1P36-201ENST00000487709 ISG20Q96AZ6 181 aaKnown RBP2.12□□□□□ -2.07
HMGB1P36-201ENST00000487709 SCGB3A2Q96PL1 93 aa2.12□□□□□ -2.07
HMGB1P36-201ENST00000487709 SIKE1Q9BRV8 207 aa2.12□□□□□ -2.07
HMGB1P36-201ENST00000487709 IL22Q9GZX6 179 aa2.12□□□□□ -2.07
HMGB1P36-201ENST00000487709 DEFB129Q9H1M3 183 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms