RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 OR5B3Q8NH48 314 aa3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 ACTRT1Q8TDG2 376 aa3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 TSEN15Q8WW01 171 aaKnown RBP3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 DUS3LQ96G46 650 aaKnown RBP3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 SMIM10Q96HG1 83 aa3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 LZTS2Q9BRK4 669 aa3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 CXCL16Q9H2A7 254 aa3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 DMAP1Q9NPF5 467 aaPredicted RBP3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 SAMSN1Q9NSI8 373 aaKnown RBP3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 GCNT4Q9P109 453 aa3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 UXTQ9UBK9 157 aaPredicted RBP3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 GOLT1BQ9Y3E0 138 aa3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 UTP20O75691 2785 aaKnown RBP3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 UBR5O95071 2799 aaPredicted RBP3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 MYH11P35749 1972 aa3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 URB1O60287 2271 aaKnown RBP3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 MYOFQ9NZM1 2061 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 ARHGAP21Q5T5U3 1957 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 TRAV39A0A0B4J263 110 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 IGHV3-64DA0A0J9YX35 117 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 A0A1B0GTQ1 180 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 FAM25EA8MYX2 175 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 E7EWF7 191 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 I3L4J1 428 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 KMOO15229 486 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 B4GALT5O43286 388 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 AKR7A2O43488 359 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 SS18L1O75177 396 aaPredicted RBP3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 OR2F2O95006 317 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 AIFM1O95831 613 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 BGLAPP02818 100 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 SERPINA5P05154 406 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 PSG2P11465 335 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 MGMTP16455 207 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 U2AF2P26368 475 aaKnown RBP eCLIP3.24□□□□□ -1.892e-19■■■■■ 33.8
PRPF38A-203ENST00000487160 HRH1P35367 487 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 CXCL5P42830 114 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 CSNK1EP49674 416 aaKnown RBP3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 ARPP19P56211 112 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 CLDN8P56748 225 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 RAB10P61026 200 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 HMGCS1Q01581 520 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 LAMTOR4Q0VGL1 99 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 TWF1Q12792 350 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 MERTKQ12866 999 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 SELENBP1Q13228 472 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 ILKQ13418 452 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 CLINT1Q14677 625 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 ZSCAN26Q16670 478 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 TTLL9Q3SXZ7 439 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 PIGGQ5H8A4 983 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 C22orf42Q6IC83 251 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 SCD5Q86SK9 330 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 KATNAL2Q8IYT4 538 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 ZNF461Q8TAF7 563 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 TSSK3Q96PN8 268 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 KCNJ16Q9NPI9 418 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 RELNP78509 3460 aa3.24□□□□□ -1.89
PRPF38A-203ENST00000487160 TEP1Q99973 2627 aaKnown RBP3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 COL6A6A6NMZ7 2263 aa3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 MYO18AQ92614 2054 aaKnown RBP3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 TRAV25A0A0B4J276 109 aa3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 GLYATL1P3A0A0U1RQE8 302 aa3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 PLAC8L1A1L4L8 177 aa3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 SIRPB1O00241 398 aa3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 TRDMT1O14717 391 aaKnown RBP3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 CD5LO43866 347 aa3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 DPM1O60762 260 aa3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 PLXNA2O75051 1894 aa3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 CA11O75493 328 aa3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 SLC1A1P43005 524 aa3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 ADARB1P78563 741 aaKnown RBP3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 PAX5Q02548 391 aa3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 IRF8Q02556 426 aa3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 SLC25A11Q02978 314 aaKnown RBP3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 IL18Q14116 193 aa3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 DMC1Q14565 340 aa3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 PON3Q15166 354 aa3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 KCTD19Q17RG1 926 aaPredicted RBP3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 TMEM255AQ5JRV8 349 aa3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 PIP5KL1Q5T9C9 394 aa3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 AGBL2Q5U5Z8 902 aa3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 SPECC1LQ69YQ0 1117 aa3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 KRTAP5-11Q6L8G4 156 aa3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 ZNF493Q6ZR52 646 aa3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 EIF3MQ7L2H7 374 aaKnown RBP3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 STRADAQ7RTN6 431 aa3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 CMTM1Q8IZ96 169 aa3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 IQCKQ8N0W5 287 aa3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 PRELID2Q8N945 189 aa3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 DUSP18Q8NEJ0 188 aa3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 TSTD1Q8NFU3 115 aa3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 GIMAP1Q8WWP7 306 aa3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 IL22RA2Q969J5 263 aa3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 FAM3DQ96BQ1 224 aa3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 ZNF799Q96GE5 643 aa3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 FAM210BQ96KR6 192 aa3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 SERPINB12Q96P63 405 aa3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 OR5B12Q96R08 314 aa3.23□□□□□ -1.89
PRPF38A-203ENST00000487160 TEKT3Q9BXF9 490 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms