RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 ZNF319Q9P2F9 582 aa6.14□□□□□ -1.43
SF3A3-206ENST00000487062 PFDN2Q9UHV9 154 aa6.14□□□□□ -1.43
SF3A3-206ENST00000487062 FREM2Q5SZK8 3169 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 A0A0G2JMP0 313 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 A0A0X1KG70 313 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 A0A1W2PQ09 198 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 PRRG2O14669 202 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 CTDSPLO15194 276 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 ZNHIT1O43257 154 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 WISP2O76076 250 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 ALX3O95076 343 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 IL18BPO95998 194 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 HLA-HP01893 362 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 HLA-DQB1P01920 261 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 HCKP08631 526 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 CSF3P09919 207 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 TMIGD3P0DMS9 266 aaPredicted RBP6.13□□□□□ -1.43
SF3A3-206ENST00000487062 ARSBP15848 533 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 IGHV1-2P23083 117 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 STOMP27105 288 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 TIMP3P35625 211 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 ZNF93P35789 620 aaPredicted RBP6.13□□□□□ -1.43
SF3A3-206ENST00000487062 POU3F4P49335 361 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 MRPS10P82664 201 aaKnown RBP6.13□□□□□ -1.43
SF3A3-206ENST00000487062 RBPJQ06330 500 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 RIPPLY1Q0D2K3 151 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 MALLQ13021 153 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 MRPL49Q13405 166 aaKnown RBP6.13□□□□□ -1.43
SF3A3-206ENST00000487062 OXA1LQ15070 435 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 FAM189A2Q15884 450 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 BAK1Q16611 211 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 SNAI3Q3KNW1 292 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 C2orf76Q3KRA6 126 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 GLYATL3Q5SZD4 288 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 ZBTB37Q5TC79 503 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 ZNF324BQ6AW86 544 aaPredicted RBP6.13□□□□□ -1.43
SF3A3-206ENST00000487062 ASPHD2Q6ICH7 369 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 MZT2BQ6NZ67 158 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 ZNF529Q6P280 563 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 BEND4Q6ZU67 534 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 UTS2BQ765I0 119 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 CISD2Q8N5K1 135 aaKnown RBP6.13□□□□□ -1.43
SF3A3-206ENST00000487062 PNLDC1Q8NA58 520 aaKnown RBP6.13□□□□□ -1.43
SF3A3-206ENST00000487062 CPEB3Q8NE35 698 aaKnown RBP6.13□□□□□ -1.43
SF3A3-206ENST00000487062 OR4M2Q8NGB6 313 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 OR51D1Q8NGF3 324 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 OR51A2Q8NGJ7 313 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 OR5L1Q8NGL2 311 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 PTX4Q96A99 478 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 RFT1Q96AA3 541 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 APOBEC3DQ96AK3 386 aaPredicted RBP6.13□□□□□ -1.43
SF3A3-206ENST00000487062 HAVCR1Q96D42 359 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 SLC25A38Q96DW6 304 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 LYZL4Q96KX0 146 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 GPER1Q99527 375 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 OPA3Q9H6K4 179 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 ZNF71Q9NQZ8 489 aaPredicted RBP6.13□□□□□ -1.43
SF3A3-206ENST00000487062 B3GNT2Q9NY97 397 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 PLA2G2EQ9NZK7 142 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 CGGBP1Q9UFW8 167 aaPredicted RBP6.13□□□□□ -1.43
SF3A3-206ENST00000487062 PIGLQ9Y2B2 252 aa6.13□□□□□ -1.43
SF3A3-206ENST00000487062 POLR3KQ9Y2Y1 108 aaPredicted RBP6.13□□□□□ -1.43
SF3A3-206ENST00000487062 LOC100509620A0A075B734 347 aa6.12□□□□□ -1.43
SF3A3-206ENST00000487062 A0A0A6YYH2 397 aa6.12□□□□□ -1.43
SF3A3-206ENST00000487062 TMEM272A0A1B0GTI8 110 aa6.12□□□□□ -1.43
SF3A3-206ENST00000487062 C5orf49A4QMS7 147 aa6.12□□□□□ -1.43
SF3A3-206ENST00000487062 METTL21EPA6NDL7 271 aa6.12□□□□□ -1.43
SF3A3-206ENST00000487062 A6NIN4 97 aa6.12□□□□□ -1.43
SF3A3-206ENST00000487062 A6NJ64 397 aa6.12□□□□□ -1.43
SF3A3-206ENST00000487062 E9PLN8 166 aa6.12□□□□□ -1.43
SF3A3-206ENST00000487062 J3QW42 95 aa6.12□□□□□ -1.43
SF3A3-206ENST00000487062 URB1O60287 2271 aaKnown RBP6.12□□□□□ -1.43
SF3A3-206ENST00000487062 RAD51DO75771 328 aa6.12□□□□□ -1.43
SF3A3-206ENST00000487062 LYZL6O75951 148 aa6.12□□□□□ -1.43
SF3A3-206ENST00000487062 SCGNO76038 276 aa6.12□□□□□ -1.43
SF3A3-206ENST00000487062 BPNT1O95861 308 aa6.12□□□□□ -1.43
SF3A3-206ENST00000487062 UBBP0CG47 229 aa6.12□□□□□ -1.43
SF3A3-206ENST00000487062 PRF1P14222 555 aa6.12□□□□□ -1.43
SF3A3-206ENST00000487062 FAHP16930 419 aa6.12□□□□□ -1.43
SF3A3-206ENST00000487062 RAB6AP20340 208 aa6.12□□□□□ -1.43
SF3A3-206ENST00000487062 COX5AP20674 150 aa6.12□□□□□ -1.43
SF3A3-206ENST00000487062 CCNOP22674 350 aa6.12□□□□□ -1.43
SF3A3-206ENST00000487062 PRKACBP22694 351 aa6.12□□□□□ -1.43
SF3A3-206ENST00000487062 MNDAP41218 407 aa6.12□□□□□ -1.43
SF3A3-206ENST00000487062 MMP15P51511 669 aa6.12□□□□□ -1.43
SF3A3-206ENST00000487062 HGFACQ04756 655 aa6.12□□□□□ -1.43
SF3A3-206ENST00000487062 MADCAM1Q13477 382 aa6.12□□□□□ -1.43
SF3A3-206ENST00000487062 ASAH1Q13510 395 aa6.12□□□□□ -1.43
SF3A3-206ENST00000487062 P2RY6Q15077 328 aa6.12□□□□□ -1.43
SF3A3-206ENST00000487062 CNN3Q15417 329 aaKnown RBP6.12□□□□□ -1.43
SF3A3-206ENST00000487062 TAB1Q15750 504 aa6.12□□□□□ -1.43
SF3A3-206ENST00000487062 GABRA6Q16445 453 aa6.12□□□□□ -1.43
SF3A3-206ENST00000487062 TBC1D28Q2M2D7 210 aa6.12□□□□□ -1.43
SF3A3-206ENST00000487062 HIKESHIQ53FT3 197 aa6.12□□□□□ -1.43
SF3A3-206ENST00000487062 TMEM69Q5SWH9 247 aa6.12□□□□□ -1.43
SF3A3-206ENST00000487062 CLVS2Q5SYC1 327 aa6.12□□□□□ -1.43
SF3A3-206ENST00000487062 ZNF57Q68EA5 555 aaPredicted RBP6.12□□□□□ -1.43
SF3A3-206ENST00000487062 AWAT2Q6E213 333 aa6.12□□□□□ -1.43
SF3A3-206ENST00000487062 VWA1Q6PCB0 445 aa6.12□□□□□ -1.43
SF3A3-206ENST00000487062 GFRALQ6UXV0 394 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms