RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 POU2F3Q9UKI9 436 aa8.2□□□□□ -1.1
MCF2L-227ENST00000486806 FZR1Q9UM11 496 aa8.2□□□□□ -1.1
MCF2L-227ENST00000486806 CMAHPQ9Y471 501 aa8.2□□□□□ -1.1
MCF2L-227ENST00000486806 SPTBN1Q01082 2364 aaKnown RBP8.2□□□□□ -1.1
MCF2L-227ENST00000486806 TRDV1A0A1B0GX56 115 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 ZNF879B4DU55 563 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 H3BSH0 61 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 GABRPO00591 440 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 HS3ST1O14792 307 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 PIN1P1O15428 100 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 LILRA1O75019 489 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 MTRF1O75570 445 aaKnown RBP8.19□□□□□ -1.1
MCF2L-227ENST00000486806 GPX5O75715 221 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 RGS9O75916 674 aaPredicted RBP8.19□□□□□ -1.1
MCF2L-227ENST00000486806 GABARAPO95166 117 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 SERPINA3P01011 423 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 HLA-DPB1P04440 258 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 OR4A8P0C604 315 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 OCM2P0CE71 109 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 SELEP16581 610 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 FAHP16930 419 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 FSTP19883 344 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 GADD45AP24522 165 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 GCH1P30793 250 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 TTKP33981 857 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 DDOSTP39656 456 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 MAGEB1P43366 347 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 EVX1P49640 407 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 FABP6P51161 128 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 KLF3P57682 345 aaPredicted RBP8.19□□□□□ -1.1
MCF2L-227ENST00000486806 TLE4Q04727 773 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 ALKBH6Q3KRA9 238 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 ACSM3Q53FZ2 586 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 ZMAT1Q5H9K5 638 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 TMEM42Q69YG0 159 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 OR2T2Q6IF00 324 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 UNQ9370/PRO34162Q6UXP9 181 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 SLC16A12Q6ZSM3 486 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 GPR141Q7Z602 305 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 ZNF295-AS1Q8N0V1 137 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 PARP16Q8N5Y8 322 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 SEMA6DQ8NFY4 1073 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 OR13C3Q8NGS6 347 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 SYNPRQ8TBG9 265 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 TSEN15Q8WW01 171 aaKnown RBP8.19□□□□□ -1.1
MCF2L-227ENST00000486806 THRSPQ92748 146 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 FBXW5Q969U6 566 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 TMEM106AQ96A25 262 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 ADAT3Q96EY9 351 aaPredicted RBP8.19□□□□□ -1.1
MCF2L-227ENST00000486806 C14orf79Q96F83 325 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 DERL3Q96Q80 235 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 DHRS9Q9BPW9 319 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 SYT3Q9BQG1 590 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 FUNDC2Q9BWH2 189 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 CHST5Q9GZS9 411 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 OR51E2Q9H255 320 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 PPIL3Q9H2H8 161 aaKnown RBP8.19□□□□□ -1.1
MCF2L-227ENST00000486806 CISD1Q9NZ45 108 aaKnown RBP8.19□□□□□ -1.1
MCF2L-227ENST00000486806 MRPL15Q9P015 296 aaKnown RBP8.19□□□□□ -1.1
MCF2L-227ENST00000486806 STUB1Q9UNE7 303 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 DHDHQ9UQ10 334 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 PIGLQ9Y2B2 252 aa8.19□□□□□ -1.1
MCF2L-227ENST00000486806 ZNF816-ZNF321PA0A0X1KG74 233 aa8.18□□□□□ -1.1
MCF2L-227ENST00000486806 GGT3PA6NGU5 568 aa8.18□□□□□ -1.1
MCF2L-227ENST00000486806 GATBO75879 557 aaKnown RBP8.18□□□□□ -1.1
MCF2L-227ENST00000486806 CST4P01036 141 aa8.18□□□□□ -1.1
MCF2L-227ENST00000486806 RAF1P04049 648 aa8.18□□□□□ -1.1
MCF2L-227ENST00000486806 UCHL1P09936 223 aa8.18□□□□□ -1.1
MCF2L-227ENST00000486806 MAPK3P27361 379 aaPredicted RBP8.18□□□□□ -1.1
MCF2L-227ENST00000486806 COL8A1P27658 744 aa8.18□□□□□ -1.1
MCF2L-227ENST00000486806 FGF9P31371 208 aaPredicted RBP8.18□□□□□ -1.1
MCF2L-227ENST00000486806 APOBEC3AP31941 199 aaPredicted RBP8.18□□□□□ -1.1
MCF2L-227ENST00000486806 SERPINF1P36955 418 aa8.18□□□□□ -1.1
MCF2L-227ENST00000486806 MAP2K3P46734 347 aa8.18□□□□□ -1.1
MCF2L-227ENST00000486806 SOX2P48431 317 aa8.18□□□□□ -1.1
MCF2L-227ENST00000486806 MMP15P51511 669 aa8.18□□□□□ -1.1
MCF2L-227ENST00000486806 RIPPLY1Q0D2K3 151 aa8.18□□□□□ -1.1
MCF2L-227ENST00000486806 MST1LQ2TV78 715 aa8.18□□□□□ -1.1
MCF2L-227ENST00000486806 TIMM50Q3ZCQ8 353 aa8.18□□□□□ -1.1
MCF2L-227ENST00000486806 FAM27D1Q5T7N8 215 aa8.18□□□□□ -1.1
MCF2L-227ENST00000486806 ZNF529Q6P280 563 aa8.18□□□□□ -1.1
MCF2L-227ENST00000486806 ANKRD13BQ86YJ7 626 aa8.18□□□□□ -1.1
MCF2L-227ENST00000486806 BHLHE23Q8NDY6 225 aa8.18□□□□□ -1.1
MCF2L-227ENST00000486806 CSNK2A3Q8NEV1 391 aa8.18□□□□□ -1.1
MCF2L-227ENST00000486806 PP6455Q8WZ26 134 aa8.18□□□□□ -1.1
MCF2L-227ENST00000486806 PHYHIPQ92561 330 aa8.18□□□□□ -1.1
MCF2L-227ENST00000486806 RPL3LQ92901 407 aaKnown RBP8.18□□□□□ -1.1
MCF2L-227ENST00000486806 SLC30A2Q9BRI3 323 aa8.18□□□□□ -1.1
MCF2L-227ENST00000486806 RBM38Q9H0Z9 239 aaKnown RBP8.18□□□□□ -1.1
MCF2L-227ENST00000486806 CLEC4MQ9H2X3 399 aaPredicted RBP8.18□□□□□ -1.1
MCF2L-227ENST00000486806 PLK3Q9H4B4 646 aa8.18□□□□□ -1.1
MCF2L-227ENST00000486806 PLEKHA1Q9HB21 404 aa8.18□□□□□ -1.1
MCF2L-227ENST00000486806 CGGBP1Q9UFW8 167 aaPredicted RBP8.18□□□□□ -1.1
MCF2L-227ENST00000486806 ENPP5Q9UJA9 477 aa8.18□□□□□ -1.1
MCF2L-227ENST00000486806 RHBDD3Q9Y3P4 386 aa8.18□□□□□ -1.1
MCF2L-227ENST00000486806 USP9YO00507 2555 aaPredicted RBP8.17□□□□□ -1.1
MCF2L-227ENST00000486806 A6NIN4 97 aa8.17□□□□□ -1.1
MCF2L-227ENST00000486806 ZSCAN5BA6NJL1 495 aa8.17□□□□□ -1.1
MCF2L-227ENST00000486806 TIMM8AO60220 97 aaPredicted RBP8.17□□□□□ -1.1
MCF2L-227ENST00000486806 CD2P06729 351 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms