RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 ADGRE4PQ86SQ3 457 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 SYT9Q86SS6 491 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 RPRMLQ8N4K4 120 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 SPERTQ8NA61 448 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 OR2AK2Q8NG84 335 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 OR10G3Q8NGC4 313 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 PAQR8Q8TEZ7 354 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 RND1Q92730 232 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 MCHR2Q969V1 340 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 FAM3DQ96BQ1 224 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 JSRP1Q96MG2 331 aaPredicted RBP7.97□□□□□ -1.13
COL12A1-208ENST00000486533 SFXN2Q96NB2 322 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 RBP7Q96R05 134 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 CHIAQ9BZP6 476 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 TXNIPQ9H3M7 391 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 TMEM138Q9NPI0 162 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 VSX1Q9NZR4 365 aaPredicted RBP7.97□□□□□ -1.13
COL12A1-208ENST00000486533 COMMD9Q9P000 198 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 ZNF346Q9UL40 294 aaKnown RBP7.97□□□□□ -1.13
COL12A1-208ENST00000486533 BOKQ9UMX3 212 aaPredicted RBP7.97□□□□□ -1.13
COL12A1-208ENST00000486533 DTX4Q9Y2E6 619 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 PHF3Q92576 2039 aaKnown RBP7.97□□□□□ -1.13
COL12A1-208ENST00000486533 ANKRD17O75179 2603 aaKnown RBP7.97□□□□□ -1.13
COL12A1-208ENST00000486533 TEP1Q99973 2627 aaKnown RBP7.97□□□□□ -1.13
COL12A1-208ENST00000486533 TRGV5A0A0B4J1U4 118 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 PRSS37A4D1T9 235 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 OR14I1A6ND48 311 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 NPIPB13A6NJU9 1138 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 ALG1L2C9J202 215 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 NPIPB4C9JG80 1138 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 MCRIP1C9JLW8 97 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 MAGEB4O15481 346 aaPredicted RBP7.97□□□□□ -1.13
COL12A1-208ENST00000486533 HCRTR2O43614 444 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 CYB5AP00167 134 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 IGHG3P01860 377 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 ERCC1P07992 297 aaPredicted RBP7.97□□□□□ -1.13
COL12A1-208ENST00000486533 RPA2P15927 270 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 TBPP20226 339 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 SSTR2P30874 369 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 CHRNB4P30926 498 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 DCTDP32321 178 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 POU3F4P49335 361 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 MAP2K6P52564 334 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 PNLIPRP2P54317 469 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 SUMO3P55854 103 aaPredicted RBP7.97□□□□□ -1.13
COL12A1-208ENST00000486533 PLCXD2Q0VAA5 305 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 NNATQ16517 81 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 C4orf46Q504U0 113 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 NHLRC3Q5JS37 347 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 STEAP1BQ6NZ63 245 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 Q6ZTK2 550 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 DPY19L4Q7Z388 723 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 GRINAQ7Z429 371 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 SLC51BQ86UW2 128 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 SERPINA12Q8IW75 414 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 PDZD9Q8IXQ8 264 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 OR4C16Q8NGL9 310 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 ZPLD1Q8TCW7 415 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 ASB5Q8WWX0 329 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 MOGAT1Q96PD6 335 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 PRRT1Q99946 306 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 ATG5Q9H1Y0 275 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 SYT4Q9H2B2 425 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 ELOVL3Q9HB03 270 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 BEX1Q9HBH7 125 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 SH2D2AQ9NP31 389 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 ALKBH4Q9NXW9 302 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 MRPL15Q9P015 296 aaKnown RBP7.97□□□□□ -1.13
COL12A1-208ENST00000486533 B4GALT7Q9UBV7 327 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 KLK11Q9UBX7 282 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 OPN4Q9UHM6 478 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 HHLA2Q9UM44 414 aa7.97□□□□□ -1.13
COL12A1-208ENST00000486533 CHCHD2Q9Y6H1 151 aaPredicted RBP7.97□□□□□ -1.13
COL12A1-208ENST00000486533 NCKAP5O14513 1909 aa7.96□□□□□ -1.13
COL12A1-208ENST00000486533 TRAV18A0A075B6X5 111 aa7.96□□□□□ -1.14
COL12A1-208ENST00000486533 NKX2-6A6NCS4 301 aa7.96□□□□□ -1.14
COL12A1-208ENST00000486533 TVP23AA6NH52 213 aa7.96□□□□□ -1.14
COL12A1-208ENST00000486533 H3BUI4 141 aa7.96□□□□□ -1.14
COL12A1-208ENST00000486533 AQP7O14520 342 aa7.96□□□□□ -1.14
COL12A1-208ENST00000486533 EIF1AYO14602 144 aaKnown RBP7.96□□□□□ -1.14
COL12A1-208ENST00000486533 TP53I11O14683 189 aa7.96□□□□□ -1.14
COL12A1-208ENST00000486533 SUSD5O60279 629 aa7.96□□□□□ -1.14
COL12A1-208ENST00000486533 TOXO94900 526 aa7.96□□□□□ -1.14
COL12A1-208ENST00000486533 AKR7A3O95154 331 aa7.96□□□□□ -1.14
COL12A1-208ENST00000486533 MPC2O95563 127 aa7.96□□□□□ -1.14
COL12A1-208ENST00000486533 RAB3DO95716 219 aa7.96□□□□□ -1.14
COL12A1-208ENST00000486533 NUDT14O95848 222 aa7.96□□□□□ -1.14
COL12A1-208ENST00000486533 CLPSP04118 112 aa7.96□□□□□ -1.14
COL12A1-208ENST00000486533 F13BP05160 661 aa7.96□□□□□ -1.14
COL12A1-208ENST00000486533 RFPL3SP0C7P2 107 aa7.96□□□□□ -1.14
COL12A1-208ENST00000486533 GABRA1P14867 456 aa7.96□□□□□ -1.14
COL12A1-208ENST00000486533 NAGAP17050 411 aa7.96□□□□□ -1.14
COL12A1-208ENST00000486533 ANXA7P20073 488 aaKnown RBP7.96□□□□□ -1.14
COL12A1-208ENST00000486533 HTR2CP28335 458 aa7.96□□□□□ -1.14
COL12A1-208ENST00000486533 NUP62P37198 522 aaPredicted RBP7.96□□□□□ -1.14
COL12A1-208ENST00000486533 EIF1AXP47813 144 aaKnown RBP7.96□□□□□ -1.14
COL12A1-208ENST00000486533 CLDN12P56749 244 aa7.96□□□□□ -1.14
COL12A1-208ENST00000486533 CD226Q15762 336 aa7.96□□□□□ -1.14
COL12A1-208ENST00000486533 HYAL4Q2M3T9 481 aa7.96□□□□□ -1.14
COL12A1-208ENST00000486533 WDR38Q5JTN6 314 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms