RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 ZNF292O60281 2723 aa17.83■□□□□ 0.44
HPS3-206ENST00000486530 TMEM235A6NFC5 223 aa17.82■□□□□ 0.44
HPS3-206ENST00000486530 MRPL33O75394 65 aaKnown RBP17.82■□□□□ 0.44
HPS3-206ENST00000486530 ALX3O95076 343 aa17.82■□□□□ 0.44
HPS3-206ENST00000486530 HPXP02790 462 aa17.82■□□□□ 0.44
HPS3-206ENST00000486530 IL5P05113 134 aa17.82■□□□□ 0.44
HPS3-206ENST00000486530 UBBP0CG47 229 aa17.82■□□□□ 0.44
HPS3-206ENST00000486530 PRF1P14222 555 aa17.82■□□□□ 0.44
HPS3-206ENST00000486530 CD46P15529 392 aa17.82■□□□□ 0.44
HPS3-206ENST00000486530 RRADP55042 308 aa17.82■□□□□ 0.44
HPS3-206ENST00000486530 NHLH1Q02575 133 aa17.82■□□□□ 0.44
HPS3-206ENST00000486530 SF3B4Q15427 424 aaKnown RBP eCLIP17.82■□□□□ 0.44
HPS3-206ENST00000486530 BCL2A1Q16548 175 aa17.82■□□□□ 0.44
HPS3-206ENST00000486530 NRN1LQ496H8 165 aa17.82■□□□□ 0.44
HPS3-206ENST00000486530 ATP1A1-AS1Q5TC04 95 aa17.82■□□□□ 0.44
HPS3-206ENST00000486530 ZNF774Q6NX45 483 aa17.82■□□□□ 0.44
HPS3-206ENST00000486530 Q6ZTK2 550 aa17.82■□□□□ 0.44
HPS3-206ENST00000486530 PIAS4Q8N2W9 510 aaPredicted RBP17.82■□□□□ 0.44
HPS3-206ENST00000486530 HYLS1Q96M11 299 aa17.82■□□□□ 0.44
HPS3-206ENST00000486530 GINS4Q9BRT9 223 aa17.82■□□□□ 0.44
HPS3-206ENST00000486530 LINC00470Q9BZP3 86 aa17.82■□□□□ 0.44
HPS3-206ENST00000486530 GPN1Q9HCN4 374 aaPredicted RBP17.82■□□□□ 0.44
HPS3-206ENST00000486530 MCTS1Q9ULC4 181 aaKnown RBP17.82■□□□□ 0.44
HPS3-206ENST00000486530 TIMM10BQ9Y5J6 103 aa17.82■□□□□ 0.44
HPS3-206ENST00000486530 IGKV1-9A0A0C4DH69 117 aa17.82■□□□□ 0.44
HPS3-206ENST00000486530 OR6C6A6NF89 314 aa17.82■□□□□ 0.44
HPS3-206ENST00000486530 ARGFXA6NJG6 315 aa17.82■□□□□ 0.44
HPS3-206ENST00000486530 CYB5AP00167 134 aa17.82■□□□□ 0.44
HPS3-206ENST00000486530 ZNF32P17041 273 aa17.82■□□□□ 0.44
HPS3-206ENST00000486530 OR3A4PP47883 348 aa17.82■□□□□ 0.44
HPS3-206ENST00000486530 NOVA1P51513 510 aaKnown RBP17.82■□□□□ 0.44
HPS3-206ENST00000486530 FAM189A2Q15884 450 aa17.82■□□□□ 0.44
HPS3-206ENST00000486530 PNLDC1Q8NA58 520 aaKnown RBP17.82■□□□□ 0.44
HPS3-206ENST00000486530 KCNG3Q8TAE7 436 aa17.82■□□□□ 0.44
HPS3-206ENST00000486530 GPER1Q99527 375 aa17.82■□□□□ 0.44
HPS3-206ENST00000486530 CHST5Q9GZS9 411 aa17.82■□□□□ 0.44
HPS3-206ENST00000486530 ZMAT3Q9HA38 289 aaKnown RBP17.82■□□□□ 0.44
HPS3-206ENST00000486530 PARPBPQ9NWS1 579 aa17.82■□□□□ 0.44
HPS3-206ENST00000486530 ING4Q9UNL4 249 aa17.82■□□□□ 0.44
HPS3-206ENST00000486530 PTPRBP23467 1997 aa17.81■□□□□ 0.44
HPS3-206ENST00000486530 MEIKINA0A087WXM9 373 aa17.81■□□□□ 0.44
HPS3-206ENST00000486530 DHRS7CA6NNS2 312 aa17.81■□□□□ 0.44
HPS3-206ENST00000486530 SMLR1H3BR10 107 aa17.81■□□□□ 0.44
HPS3-206ENST00000486530 FABP7O15540 132 aa17.81■□□□□ 0.44
HPS3-206ENST00000486530 MELTFP08582 738 aa17.81■□□□□ 0.44
HPS3-206ENST00000486530 CXCL3P19876 107 aa17.81■□□□□ 0.44
HPS3-206ENST00000486530 RAD52P43351 418 aa17.81■□□□□ 0.44
HPS3-206ENST00000486530 SOX8P57073 446 aa17.81■□□□□ 0.44
HPS3-206ENST00000486530 STK11Q15831 433 aa17.81■□□□□ 0.44
HPS3-206ENST00000486530 KRTAP27-1Q3LI81 207 aa17.81■□□□□ 0.44
HPS3-206ENST00000486530 SLC16A14Q7RTX9 510 aa17.81■□□□□ 0.44
HPS3-206ENST00000486530 ZFP62Q8NB50 900 aaPredicted RBP17.81■□□□□ 0.44
HPS3-206ENST00000486530 OR8S1Q8NH09 359 aa17.81■□□□□ 0.44
HPS3-206ENST00000486530 C1orf147Q96MC9 270 aaPredicted RBP17.81■□□□□ 0.44
HPS3-206ENST00000486530 TMEM246Q9BRR3 403 aa17.81■□□□□ 0.44
HPS3-206ENST00000486530 PLSCR3Q9NRY6 295 aa17.81■□□□□ 0.44
HPS3-206ENST00000486530 DLL3Q9NYJ7 618 aa17.81■□□□□ 0.44
HPS3-206ENST00000486530 PTTG3PQ9NZH4 202 aa17.81■□□□□ 0.44
HPS3-206ENST00000486530 SNRPGP15A8MWD9 76 aa17.8■□□□□ 0.44
HPS3-206ENST00000486530 FARS2O95363 451 aaKnown RBP17.8■□□□□ 0.44
HPS3-206ENST00000486530 RAB3DO95716 219 aa17.8■□□□□ 0.44
HPS3-206ENST00000486530 CHRM2P08172 466 aa17.8■□□□□ 0.44
HPS3-206ENST00000486530 HOXD11P31277 338 aaPredicted RBP17.8■□□□□ 0.44
HPS3-206ENST00000486530 PPIAP62937 165 aaKnown RBP17.8■□□□□ 0.44
HPS3-206ENST00000486530 SNAI3Q3KNW1 292 aa17.8■□□□□ 0.44
HPS3-206ENST00000486530 RNF144BQ7Z419 303 aa17.8■□□□□ 0.44
HPS3-206ENST00000486530 ZNF584Q8IVC4 421 aa17.8■□□□□ 0.44
HPS3-206ENST00000486530 ASCC1Q8N9N2 400 aaKnown RBP17.8■□□□□ 0.44
HPS3-206ENST00000486530 CHST4Q8NCG5 386 aa17.8■□□□□ 0.44
HPS3-206ENST00000486530 OR51S1Q8NGJ8 323 aa17.8■□□□□ 0.44
HPS3-206ENST00000486530 OR10R2Q8NGX6 335 aa17.8■□□□□ 0.44
HPS3-206ENST00000486530 MS4A3Q96HJ5 214 aa17.8■□□□□ 0.44
HPS3-206ENST00000486530 OR2H1Q9GZK4 316 aa17.8■□□□□ 0.44
HPS3-206ENST00000486530 RANBP3Q9H6Z4 567 aaPredicted RBP17.8■□□□□ 0.44
HPS3-206ENST00000486530 KLK13Q9UKR3 277 aa17.8■□□□□ 0.44
HPS3-206ENST00000486530 PIGLQ9Y2B2 252 aa17.8■□□□□ 0.44
HPS3-206ENST00000486530 BOLA1Q9Y3E2 137 aa17.8■□□□□ 0.44
HPS3-206ENST00000486530 WIPF3A6NGB9 483 aa17.8■□□□□ 0.44
HPS3-206ENST00000486530 OR6C65A6NJZ3 312 aa17.8■□□□□ 0.44
HPS3-206ENST00000486530 PYCARD-AS1I3L0S3 204 aa17.8■□□□□ 0.44
HPS3-206ENST00000486530 CREBL2O60519 120 aaPredicted RBP17.8■□□□□ 0.44
HPS3-206ENST00000486530 CD74P04233 296 aa17.8■□□□□ 0.44
HPS3-206ENST00000486530 LIPCP11150 499 aa17.8■□□□□ 0.44
HPS3-206ENST00000486530 CPN1P15169 458 aa17.8■□□□□ 0.44
HPS3-206ENST00000486530 FAHP16930 419 aa17.8■□□□□ 0.44
HPS3-206ENST00000486530 ANXA7P20073 488 aaKnown RBP17.8■□□□□ 0.44
HPS3-206ENST00000486530 HTR5AP47898 357 aa17.8■□□□□ 0.44
HPS3-206ENST00000486530 PSG4Q00888 419 aa17.8■□□□□ 0.44
HPS3-206ENST00000486530 TSPO2Q5TGU0 170 aa17.8■□□□□ 0.44
HPS3-206ENST00000486530 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.8■□□□□ 0.44
HPS3-206ENST00000486530 VASH2Q86V25 355 aa17.8■□□□□ 0.44
HPS3-206ENST00000486530 DVL3Q92997 716 aaPredicted RBP17.8■□□□□ 0.44
HPS3-206ENST00000486530 SEC22CQ9BRL7 303 aa17.8■□□□□ 0.44
HPS3-206ENST00000486530 LPAR5Q9H1C0 372 aa17.8■□□□□ 0.44
HPS3-206ENST00000486530 SLA2Q9H6Q3 261 aa17.8■□□□□ 0.44
HPS3-206ENST00000486530 EXO5Q9H790 373 aa17.8■□□□□ 0.44
HPS3-206ENST00000486530 RNF122Q9H9V4 155 aa17.8■□□□□ 0.44
HPS3-206ENST00000486530 ACKR4Q9NPB9 350 aa17.8■□□□□ 0.44
HPS3-206ENST00000486530 ZNF224Q9NZL3 707 aa17.8■□□□□ 0.44
HPS3-206ENST00000486530 GHRLQ9UBU3 117 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms