RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 C14orf119Q9NWQ9 140 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 DCAF16Q9NXF7 216 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 HAO2Q9NYQ3 351 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 RNF7Q9UBF6 113 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 OPN4Q9UHM6 478 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 ENOPH1Q9UHY7 261 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 PPIAL4AQ9Y536 164 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 AP4S1Q9Y587 144 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 TMEM14AQ9Y6G1 99 aa5.87□□□□□ -1.47
VPS50-218ENST00000485994 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.86□□□□□ -1.47
VPS50-218ENST00000485994 A0A0U1RQV5 110 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 KIR2DS1A0A191URI9 304 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 hCG_38984A0A1B0GV85 526 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 ISPDA4D126 451 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 GGT3PA6NGU5 568 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 ZAR1LA6NP61 321 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 G3V2T6 193 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 ZNF254O75437 659 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 TIPRLO75663 272 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 HLA-DPB1P04440 258 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 LIPFP07098 398 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 H2BFMP0C1H6 154 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 FCGR1AP12314 374 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 ATP6V1B1P15313 513 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 CA6P23280 308 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 POU1F1P28069 291 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 HSD11B1P28845 292 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 ROM1Q03395 351 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 OR8G1Q15617 311 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 OR8B8Q15620 311 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 KCNJ8Q15842 424 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 SNAPC1Q16533 368 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 KRTAP24-1Q3LI83 254 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 ESCO2Q56NI9 601 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 GLYATL3Q5SZD4 288 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 SLX4IPQ5VYV7 408 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 PLBD1Q6P4A8 553 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 KCTD18Q6PI47 426 aaPredicted RBP5.86□□□□□ -1.47
VPS50-218ENST00000485994 LRRN1Q6UXK5 716 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 ZNF841Q6ZN19 808 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 DCDC5Q6ZRR9 648 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 IL17RELQ6ZVW7 336 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 SLC16A9Q7RTY1 509 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.86□□□□□ -1.47
VPS50-218ENST00000485994 ZDHHC13Q8IUH4 622 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 PHC2Q8IXK0 858 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 C11orf53Q8IXP5 236 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 C10orf67Q8IYJ2 551 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 GALNT4Q8N4A0 578 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 IQCF1Q8N6M8 205 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 BHLHE23Q8NDY6 225 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 OR10AD1Q8NGE0 317 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 OR11L1Q8NGX0 322 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 OR6N2Q8NGY6 317 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 ZNF420Q8TAQ5 688 aaPredicted RBP5.86□□□□□ -1.47
VPS50-218ENST00000485994 THEM6Q8WUY1 208 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 ASB17Q8WXJ9 295 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 DVL3Q92997 716 aaPredicted RBP5.86□□□□□ -1.47
VPS50-218ENST00000485994 ZMYND19Q96E35 227 aaPredicted RBP5.86□□□□□ -1.47
VPS50-218ENST00000485994 NEIL1Q96FI4 390 aaPredicted RBP5.86□□□□□ -1.47
VPS50-218ENST00000485994 PLEKHA8Q96JA3 519 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 TMEM246Q9BRR3 403 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 PRRG3Q9BZD7 231 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 GABARAPL1Q9H0R8 117 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 OR10A2Q9H208 303 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 C7orf69Q9H7B7 122 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 MED20Q9H944 212 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 FN3KRPQ9HA64 309 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 ABCB9Q9NP78 766 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 PAPOLBQ9NRJ5 636 aaKnown RBP5.86□□□□□ -1.47
VPS50-218ENST00000485994 KAAG1Q9UBP8 84 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 INSIG2Q9Y5U4 225 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 MPC1Q9Y5U8 109 aa5.86□□□□□ -1.47
VPS50-218ENST00000485994 ANK2Q01484 3957 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 C5orf63A6NC05 138 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 ANKRD30BLA7E2S9 258 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 CEACAM18A8MTB9 384 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 LGALS8O00214 317 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 PHYHO14832 338 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 FAM20BO75063 409 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 CST4P01036 141 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 IGLV3-1P01715 115 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 IRF2P14316 349 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 CD33P20138 364 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 ANOS1P23352 680 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 FPR2P25090 351 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 CX3CR1P49238 355 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 ZNF121P58317 390 aaPredicted RBP5.85□□□□□ -1.47
VPS50-218ENST00000485994 BPIFB3P59826 476 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 HILS1P60008 231 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 ACTR3P61158 418 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 LCN2P80188 198 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 ZNF154Q13106 437 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 TMED1Q13445 227 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 MPPED2Q15777 294 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 KLHL12Q53G59 568 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 ATPAF1Q5TC12 328 aaPredicted RBP5.85□□□□□ -1.47
VPS50-218ENST00000485994 AADACL4Q5VUY2 407 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 NXNL2Q5VZ03 156 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 TEX36Q5VZQ5 186 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms