RNA–Protein interactions for RNA: ENST00000485934.1

HDHD3-203, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

TSL 2

Gene HDHD3, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-203ENST00000485934 CDC14BO60729 498 aa13.06□□□□□ -0.32
HDHD3-203ENST00000485934 WBP4O75554 376 aaKnown RBP13.06□□□□□ -0.32
HDHD3-203ENST00000485934 RPP14O95059 124 aaKnown RBP13.06□□□□□ -0.32
HDHD3-203ENST00000485934 CLIC3O95833 236 aa13.06□□□□□ -0.32
HDHD3-203ENST00000485934 IRF2P14316 349 aa13.06□□□□□ -0.32
HDHD3-203ENST00000485934 MYL12AP19105 171 aa13.06□□□□□ -0.32
HDHD3-203ENST00000485934 CA6P23280 308 aa13.06□□□□□ -0.32
HDHD3-203ENST00000485934 COL8A2P25067 703 aa13.06□□□□□ -0.32
HDHD3-203ENST00000485934 CHN2P52757 468 aa13.06□□□□□ -0.32
HDHD3-203ENST00000485934 RIPPLY1Q0D2K3 151 aa13.06□□□□□ -0.32
HDHD3-203ENST00000485934 CDONQ4KMG0 1287 aa13.06□□□□□ -0.32
HDHD3-203ENST00000485934 TMEM255AQ5JRV8 349 aa13.06□□□□□ -0.32
HDHD3-203ENST00000485934 ZNF684Q5T5D7 378 aa13.06□□□□□ -0.32
HDHD3-203ENST00000485934 ZBTB37Q5TC79 503 aa13.06□□□□□ -0.32
HDHD3-203ENST00000485934 TMPRSS11AQ6ZMR5 421 aa13.06□□□□□ -0.32
HDHD3-203ENST00000485934 C1orf87Q8N0U7 546 aa13.06□□□□□ -0.32
HDHD3-203ENST00000485934 SYS1Q8N2H4 156 aa13.06□□□□□ -0.32
HDHD3-203ENST00000485934 APH1BQ8WW43 257 aa13.06□□□□□ -0.32
HDHD3-203ENST00000485934 JAM3Q9BX67 310 aa13.06□□□□□ -0.32
HDHD3-203ENST00000485934 TTTY10Q9BZA0 68 aa13.06□□□□□ -0.32
HDHD3-203ENST00000485934 ZNF275Q9NSD4 429 aaPredicted RBP13.06□□□□□ -0.32
HDHD3-203ENST00000485934 EFCAB10A6NFE3 127 aa13.05□□□□□ -0.32
HDHD3-203ENST00000485934 DHRS7CA6NNS2 312 aa13.05□□□□□ -0.32
HDHD3-203ENST00000485934 RRP9O43818 475 aaKnown RBP13.05□□□□□ -0.32
HDHD3-203ENST00000485934 FAM20BO75063 409 aa13.05□□□□□ -0.32
HDHD3-203ENST00000485934 NCR1O76036 304 aa13.05□□□□□ -0.32
HDHD3-203ENST00000485934 CST4P01036 141 aa13.05□□□□□ -0.32
HDHD3-203ENST00000485934 IGHA1P01876 353 aa13.05□□□□□ -0.32
HDHD3-203ENST00000485934 CD200P41217 278 aa13.05□□□□□ -0.32
HDHD3-203ENST00000485934 GATA4P43694 442 aa13.05□□□□□ -0.32
HDHD3-203ENST00000485934 ZNF85Q03923 595 aa13.05□□□□□ -0.32
HDHD3-203ENST00000485934 DOK3Q7L591 496 aa13.05□□□□□ -0.32
HDHD3-203ENST00000485934 SEMA6DQ8NFY4 1073 aa13.05□□□□□ -0.32
HDHD3-203ENST00000485934 OR11L1Q8NGX0 322 aa13.05□□□□□ -0.32
HDHD3-203ENST00000485934 CNIH3Q8TBE1 160 aa13.05□□□□□ -0.32
HDHD3-203ENST00000485934 NRG4Q8WWG1 115 aa13.05□□□□□ -0.32
HDHD3-203ENST00000485934 GTF3AQ92664 365 aaKnown RBP13.05□□□□□ -0.32
HDHD3-203ENST00000485934 MEGF10Q96KG7 1140 aa13.05□□□□□ -0.32
HDHD3-203ENST00000485934 MICU1Q9BPX6 476 aa13.05□□□□□ -0.32
HDHD3-203ENST00000485934 ADAT1Q9BUB4 502 aaKnown RBP13.05□□□□□ -0.32
HDHD3-203ENST00000485934 BPESC1Q9GZL8 116 aa13.05□□□□□ -0.32
HDHD3-203ENST00000485934 FGF20Q9NP95 211 aaPredicted RBP13.05□□□□□ -0.32
HDHD3-203ENST00000485934 PLCXD1Q9NUJ7 323 aa13.05□□□□□ -0.32
HDHD3-203ENST00000485934 CNOT2Q9NZN8 540 aaKnown RBP13.05□□□□□ -0.32
HDHD3-203ENST00000485934 ZNF319Q9P2F9 582 aa13.05□□□□□ -0.32
HDHD3-203ENST00000485934 AASSQ9UDR5 926 aa13.05□□□□□ -0.32
HDHD3-203ENST00000485934 RRP15Q9Y3B9 282 aaKnown RBP13.05□□□□□ -0.32
HDHD3-203ENST00000485934 ZNF816-ZNF321PA0A0X1KG74 233 aa13.04□□□□□ -0.32
HDHD3-203ENST00000485934 A0A1B0GVI7 797 aa13.04□□□□□ -0.32
HDHD3-203ENST00000485934 PRR32B1ATL7 298 aa13.04□□□□□ -0.32
HDHD3-203ENST00000485934 J3QLW9 94 aa13.04□□□□□ -0.32
HDHD3-203ENST00000485934 SMAD7O15105 426 aaKnown RBP13.04□□□□□ -0.32
HDHD3-203ENST00000485934 SRSF10O75494 262 aaKnown RBP13.04□□□□□ -0.32
HDHD3-203ENST00000485934 RP2O75695 350 aa13.04□□□□□ -0.32
HDHD3-203ENST00000485934 DHRS3O75911 302 aa13.04□□□□□ -0.32
HDHD3-203ENST00000485934 PNPP00491 289 aa13.04□□□□□ -0.32
HDHD3-203ENST00000485934 TTRP02766 147 aa13.04□□□□□ -0.32
HDHD3-203ENST00000485934 HLA-DPB1P04440 258 aa13.04□□□□□ -0.32
HDHD3-203ENST00000485934 UBCP0CG48 685 aaKnown RBP13.04□□□□□ -0.32
HDHD3-203ENST00000485934 ZNF19P17023 458 aa13.04□□□□□ -0.32
HDHD3-203ENST00000485934 CCR9P51686 369 aa13.04□□□□□ -0.32
HDHD3-203ENST00000485934 GBX2P52951 348 aaPredicted RBP13.04□□□□□ -0.32
HDHD3-203ENST00000485934 AQP4P55087 323 aa13.04□□□□□ -0.32
HDHD3-203ENST00000485934 CDH15P55291 814 aa13.04□□□□□ -0.32
HDHD3-203ENST00000485934 ZNF181Q2M3W8 571 aa13.04□□□□□ -0.32
HDHD3-203ENST00000485934 TP53I3Q53FA7 332 aa13.04□□□□□ -0.32
HDHD3-203ENST00000485934 FDX2Q6P4F2 183 aa13.04□□□□□ -0.32
HDHD3-203ENST00000485934 SSX6Q7RTT6 188 aa13.04□□□□□ -0.32
HDHD3-203ENST00000485934 LHFPL3Q86UP9 236 aa13.04□□□□□ -0.32
HDHD3-203ENST00000485934 RFLNBQ8N5W9 214 aa13.04□□□□□ -0.32
HDHD3-203ENST00000485934 OR10AD1Q8NGE0 317 aa13.04□□□□□ -0.32
HDHD3-203ENST00000485934 OR52I1Q8NGK6 324 aa13.04□□□□□ -0.32
HDHD3-203ENST00000485934 OR51E1Q8TCB6 317 aa13.04□□□□□ -0.32
HDHD3-203ENST00000485934 ITLN1Q8WWA0 313 aa13.04□□□□□ -0.32
HDHD3-203ENST00000485934 RORBQ92753 470 aa13.04□□□□□ -0.32
HDHD3-203ENST00000485934 TMEM80Q96HE8 168 aa13.04□□□□□ -0.32
HDHD3-203ENST00000485934 ALG8Q9BVK2 526 aa13.04□□□□□ -0.32
HDHD3-203ENST00000485934 PAPOLGQ9BWT3 736 aaKnown RBP13.04□□□□□ -0.32
HDHD3-203ENST00000485934 FN3KRPQ9HA64 309 aa13.04□□□□□ -0.32
HDHD3-203ENST00000485934 G6PC2Q9NQR9 355 aa13.04□□□□□ -0.32
HDHD3-203ENST00000485934 GPR84Q9NQS5 396 aa13.04□□□□□ -0.32
HDHD3-203ENST00000485934 TMEM106BQ9NUM4 274 aa13.04□□□□□ -0.32
HDHD3-203ENST00000485934 ERVK13-1Q9NX77 482 aa13.04□□□□□ -0.32
HDHD3-203ENST00000485934 SCN3BQ9NY72 215 aa13.04□□□□□ -0.32
HDHD3-203ENST00000485934 ENPP5Q9UJA9 477 aa13.04□□□□□ -0.32
HDHD3-203ENST00000485934 EXOSC1Q9Y3B2 195 aaKnown RBP13.04□□□□□ -0.32
HDHD3-203ENST00000485934 ARFGEF3Q5TH69 2177 aa13.04□□□□□ -0.32
HDHD3-203ENST00000485934 C5orf63A6NC05 138 aa13.03□□□□□ -0.32
HDHD3-203ENST00000485934 F5H5P2 479 aa13.03□□□□□ -0.32
HDHD3-203ENST00000485934 LYNX1G3V0Z9 82 aa13.03□□□□□ -0.32
HDHD3-203ENST00000485934 MAGEB4O15481 346 aaPredicted RBP13.03□□□□□ -0.32
HDHD3-203ENST00000485934 MLNRO43193 412 aa13.03□□□□□ -0.32
HDHD3-203ENST00000485934 HTR1AP08908 422 aa13.03□□□□□ -0.32
HDHD3-203ENST00000485934 LYNX1P0DP58 116 aa13.03□□□□□ -0.32
HDHD3-203ENST00000485934 PIPP12273 146 aaPredicted RBP13.03□□□□□ -0.32
HDHD3-203ENST00000485934 CPT2P23786 658 aa13.03□□□□□ -0.32
HDHD3-203ENST00000485934 VHLP40337 213 aa13.03□□□□□ -0.32
HDHD3-203ENST00000485934 SMN1Q16637 294 aaKnown RBP13.03□□□□□ -0.32
HDHD3-203ENST00000485934 C6orf52Q5T4I8 152 aa13.03□□□□□ -0.32
HDHD3-203ENST00000485934 TMEM244Q5VVB8 128 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms