RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 PPP1CBP62140 327 aa17.63■□□□□ 0.41
VCPKMT-203ENST00000484763 PPP3R1P63098 170 aa17.63■□□□□ 0.41
VCPKMT-203ENST00000484763 RIPPLY1Q0D2K3 151 aa17.63■□□□□ 0.41
VCPKMT-203ENST00000484763 TMEM108Q6UXF1 575 aa17.63■□□□□ 0.41
VCPKMT-203ENST00000484763 OR5D14Q8NGL3 314 aa17.63■□□□□ 0.41
VCPKMT-203ENST00000484763 ITFG2Q969R8 447 aa17.63■□□□□ 0.41
VCPKMT-203ENST00000484763 BCL2L14Q9BZR8 327 aa17.63■□□□□ 0.41
VCPKMT-203ENST00000484763 SLIRPQ9GZT3 109 aaKnown RBP17.63■□□□□ 0.41
VCPKMT-203ENST00000484763 NCR1O76036 304 aa17.63■□□□□ 0.41
VCPKMT-203ENST00000484763 MAS1P04201 325 aa17.63■□□□□ 0.41
VCPKMT-203ENST00000484763 EPXP11678 715 aa17.63■□□□□ 0.41
VCPKMT-203ENST00000484763 FAHP16930 419 aa17.63■□□□□ 0.41
VCPKMT-203ENST00000484763 DDOSTP39656 456 aa17.63■□□□□ 0.41
VCPKMT-203ENST00000484763 PRSS12P56730 875 aa17.63■□□□□ 0.41
VCPKMT-203ENST00000484763 TFF3Q07654 80 aa17.63■□□□□ 0.41
VCPKMT-203ENST00000484763 TNK1Q13470 666 aa17.63■□□□□ 0.41
VCPKMT-203ENST00000484763 HLXQ14774 488 aaPredicted RBP17.63■□□□□ 0.41
VCPKMT-203ENST00000484763 CEP78Q5JTW2 689 aa17.63■□□□□ 0.41
VCPKMT-203ENST00000484763 LRRTM1Q86UE6 522 aa17.63■□□□□ 0.41
VCPKMT-203ENST00000484763 NR2C2APQ86WQ0 139 aa17.63■□□□□ 0.41
VCPKMT-203ENST00000484763 OR1J1Q8NGS3 322 aa17.63■□□□□ 0.41
VCPKMT-203ENST00000484763 PP6455Q8WZ26 134 aa17.63■□□□□ 0.41
VCPKMT-203ENST00000484763 BARHL1Q9BZE3 327 aa17.63■□□□□ 0.41
VCPKMT-203ENST00000484763 NGBQ9NPG2 151 aa17.63■□□□□ 0.41
VCPKMT-203ENST00000484763 NDRG3Q9UGV2 375 aa17.63■□□□□ 0.41
VCPKMT-203ENST00000484763 HEATR1Q9H583 2144 aaKnown RBP17.62■□□□□ 0.41
VCPKMT-203ENST00000484763 TUBG1P23258 451 aa17.62■□□□□ 0.41
VCPKMT-203ENST00000484763 CD40P25942 277 aa17.62■□□□□ 0.41
VCPKMT-203ENST00000484763 GRNP28799 593 aaKnown RBP17.62■□□□□ 0.41
VCPKMT-203ENST00000484763 CAV3P56539 151 aa17.62■□□□□ 0.41
VCPKMT-203ENST00000484763 CROCCP3Q8IVE0 287 aa17.62■□□□□ 0.41
VCPKMT-203ENST00000484763 C1orf174Q8IYL3 243 aa17.62■□□□□ 0.41
VCPKMT-203ENST00000484763 DACH2Q96NX9 599 aa17.62■□□□□ 0.41
VCPKMT-203ENST00000484763 CHST5Q9GZS9 411 aa17.62■□□□□ 0.41
VCPKMT-203ENST00000484763 ZCCHC4Q9H5U6 513 aa17.62■□□□□ 0.41
VCPKMT-203ENST00000484763 TUBG2Q9NRH3 451 aa17.62■□□□□ 0.41
VCPKMT-203ENST00000484763 AK6Q9Y3D8 172 aaKnown RBP17.62■□□□□ 0.41
VCPKMT-203ENST00000484763 ANXA2P2A6NMY6 339 aa17.61■□□□□ 0.41
VCPKMT-203ENST00000484763 ADRA2CP18825 462 aa17.61■□□□□ 0.41
VCPKMT-203ENST00000484763 PTAFRP25105 342 aa17.61■□□□□ 0.41
VCPKMT-203ENST00000484763 OR10A3P58181 314 aa17.61■□□□□ 0.41
VCPKMT-203ENST00000484763 SPATA46Q5T0L3 261 aa17.61■□□□□ 0.41
VCPKMT-203ENST00000484763 ZBTB37Q5TC79 503 aa17.61■□□□□ 0.41
VCPKMT-203ENST00000484763 FBXW12Q6X9E4 464 aa17.61■□□□□ 0.41
VCPKMT-203ENST00000484763 OR2J1Q9GZK6 312 aa17.61■□□□□ 0.41
VCPKMT-203ENST00000484763 PMF1-BGLAPU3KQ54 211 aa17.61■□□□□ 0.41
VCPKMT-203ENST00000484763 HCFC1P51610 2035 aa17.61■□□□□ 0.41
VCPKMT-203ENST00000484763 ZNF462Q96JM2 2506 aa17.61■□□□□ 0.41
VCPKMT-203ENST00000484763 A0A0G2JK05 382 aa17.61■□□□□ 0.41
VCPKMT-203ENST00000484763 RAB3AP20336 220 aa17.61■□□□□ 0.41
VCPKMT-203ENST00000484763 ZNF404Q494X3 552 aa17.61■□□□□ 0.41
VCPKMT-203ENST00000484763 ZNF529Q6P280 563 aa17.61■□□□□ 0.41
VCPKMT-203ENST00000484763 SFXN4Q6P4A7 337 aa17.61■□□□□ 0.41
VCPKMT-203ENST00000484763 OR1M1Q8NGA1 313 aa17.61■□□□□ 0.41
VCPKMT-203ENST00000484763 OR56B2PQ8NGI1 322 aa17.61■□□□□ 0.41
VCPKMT-203ENST00000484763 OR13C9Q8NGT0 318 aa17.61■□□□□ 0.41
VCPKMT-203ENST00000484763 SLC25A40Q8TBP6 338 aa17.61■□□□□ 0.41
VCPKMT-203ENST00000484763 SLC30A2Q9BRI3 323 aa17.61■□□□□ 0.41
VCPKMT-203ENST00000484763 SPEF1Q9Y4P9 236 aa17.61■□□□□ 0.41
VCPKMT-203ENST00000484763 GGT3PA6NGU5 568 aa17.6■□□□□ 0.41
VCPKMT-203ENST00000484763 NOTOA8MTQ0 251 aa17.6■□□□□ 0.41
VCPKMT-203ENST00000484763 SULT1B1O43704 296 aa17.6■□□□□ 0.41
VCPKMT-203ENST00000484763 PSMD7P51665 324 aa17.6■□□□□ 0.41
VCPKMT-203ENST00000484763 ERVS71-1P61550 626 aa17.6■□□□□ 0.41
VCPKMT-203ENST00000484763 UTS2BQ765I0 119 aa17.6■□□□□ 0.41
VCPKMT-203ENST00000484763 OR51A2Q8NGJ7 313 aa17.6■□□□□ 0.41
VCPKMT-203ENST00000484763 GFI1Q99684 422 aa17.6■□□□□ 0.41
VCPKMT-203ENST00000484763 V9GY05 133 aa17.6■□□□□ 0.41
VCPKMT-203ENST00000484763 ZNF816-ZNF321PA0A0X1KG74 233 aa17.59■□□□□ 0.41
VCPKMT-203ENST00000484763 MEGF11A6BM72 1044 aa17.59■□□□□ 0.41
VCPKMT-203ENST00000484763 SPOCK1Q08629 439 aa17.59■□□□□ 0.41
VCPKMT-203ENST00000484763 FTMTQ8N4E7 242 aa17.59■□□□□ 0.41
VCPKMT-203ENST00000484763 NKAIN3Q8N8D7 197 aa17.59■□□□□ 0.41
VCPKMT-203ENST00000484763 CSNK2A3Q8NEV1 391 aa17.59■□□□□ 0.41
VCPKMT-203ENST00000484763 MCFD2Q8NI22 146 aa17.59■□□□□ 0.41
VCPKMT-203ENST00000484763 AP3S1Q92572 193 aa17.59■□□□□ 0.41
VCPKMT-203ENST00000484763 NXF2Q9GZY0 626 aaKnown RBP17.59■□□□□ 0.41
VCPKMT-203ENST00000484763 TMEM138Q9NPI0 162 aa17.59■□□□□ 0.41
VCPKMT-203ENST00000484763 PLEKHB1Q9UF11 243 aaPredicted RBP17.59■□□□□ 0.41
VCPKMT-203ENST00000484763 A3GALT2U3KPV4 340 aa17.59■□□□□ 0.41
VCPKMT-203ENST00000484763 ATP6V1G2-DDX39BF2Z307 99 aa17.58■□□□□ 0.41
VCPKMT-203ENST00000484763 CLPXO76031 633 aa17.58■□□□□ 0.41
VCPKMT-203ENST00000484763 ERCC1P07992 297 aaPredicted RBP17.58■□□□□ 0.41
VCPKMT-203ENST00000484763 RAC2P15153 192 aa17.58■□□□□ 0.41
VCPKMT-203ENST00000484763 BDKRB2P30411 391 aa17.58■□□□□ 0.41
VCPKMT-203ENST00000484763 SNTB2Q13425 540 aaKnown RBP17.58■□□□□ 0.41
VCPKMT-203ENST00000484763 SNTB1Q13884 538 aaKnown RBP17.58■□□□□ 0.41
VCPKMT-203ENST00000484763 CLVS2Q5SYC1 327 aa17.58■□□□□ 0.41
VCPKMT-203ENST00000484763 DNAAF1Q8NEP3 725 aa17.58■□□□□ 0.41
VCPKMT-203ENST00000484763 LINC01560Q8TB33 94 aa17.58■□□□□ 0.41
VCPKMT-203ENST00000484763 MARS2Q96GW9 593 aaKnown RBP17.58■□□□□ 0.41
VCPKMT-203ENST00000484763 KCNN3Q9UGI6 736 aa17.58■□□□□ 0.41
VCPKMT-203ENST00000484763 FAM208BQ5VWN6 2430 aa17.58■□□□□ 0.41
VCPKMT-203ENST00000484763 TUBAL3A6NHL2 446 aa17.58■□□□□ 0.4
VCPKMT-203ENST00000484763 CD300LBA8K4G0 201 aa17.58■□□□□ 0.4
VCPKMT-203ENST00000484763 ALX3O95076 343 aa17.58■□□□□ 0.4
VCPKMT-203ENST00000484763 BSPH1Q075Z2 132 aa17.58■□□□□ 0.4
VCPKMT-203ENST00000484763 GLT8D1Q68CQ7 371 aa17.58■□□□□ 0.4
VCPKMT-203ENST00000484763 TMEM42Q69YG0 159 aa17.58■□□□□ 0.4
VCPKMT-203ENST00000484763 KLF14Q8TD94 323 aaPredicted RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms