RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 TMEM106BQ9NUM4 274 aa13.43□□□□□ -0.26
UPF3A-208ENST00000484246 H0YAE9 185 aa13.42□□□□□ -0.26
UPF3A-208ENST00000484246 PSMD9O00233 223 aa13.42□□□□□ -0.26
UPF3A-208ENST00000484246 PPIHO43447 177 aaKnown RBP13.42□□□□□ -0.26
UPF3A-208ENST00000484246 APOL3O95236 402 aa13.42□□□□□ -0.26
UPF3A-208ENST00000484246 PNPP00491 289 aa13.42□□□□□ -0.26
UPF3A-208ENST00000484246 IGHV4-31P0DP07 118 aa13.42□□□□□ -0.26
UPF3A-208ENST00000484246 ATP6V1E1P36543 226 aa13.42□□□□□ -0.26
UPF3A-208ENST00000484246 ZNF85Q03923 595 aa13.42□□□□□ -0.26
UPF3A-208ENST00000484246 MFGE8Q08431 387 aaPredicted RBP13.42□□□□□ -0.26
UPF3A-208ENST00000484246 FTMTQ8N4E7 242 aa13.42□□□□□ -0.26
UPF3A-208ENST00000484246 SETD9Q8NE22 299 aa13.42□□□□□ -0.26
UPF3A-208ENST00000484246 CCL17Q92583 94 aa13.42□□□□□ -0.26
UPF3A-208ENST00000484246 SIGLEC11Q96RL6 698 aa13.42□□□□□ -0.26
UPF3A-208ENST00000484246 ADI1Q9BV57 179 aa13.42□□□□□ -0.26
UPF3A-208ENST00000484246 TTTY10Q9BZA0 68 aa13.42□□□□□ -0.26
UPF3A-208ENST00000484246 PBOV1Q9GZY1 135 aa13.42□□□□□ -0.26
UPF3A-208ENST00000484246 GCM1Q9NP62 436 aa13.42□□□□□ -0.26
UPF3A-208ENST00000484246 ABCB9Q9NP78 766 aa13.42□□□□□ -0.26
UPF3A-208ENST00000484246 BRD7Q9NPI1 651 aa13.42□□□□□ -0.26
UPF3A-208ENST00000484246 G6PC2Q9NQR9 355 aa13.42□□□□□ -0.26
UPF3A-208ENST00000484246 PPP1R3CQ9UQK1 317 aa13.42□□□□□ -0.26
UPF3A-208ENST00000484246 WIPI2Q9Y4P8 454 aa13.42□□□□□ -0.26
UPF3A-208ENST00000484246 N6AMT1Q9Y5N5 214 aa13.42□□□□□ -0.26
UPF3A-208ENST00000484246 HSPE1-MOB4S4R3N1 261 aa13.42□□□□□ -0.26
UPF3A-208ENST00000484246 DNHD1Q96M86 4753 aa13.41□□□□□ -0.26
UPF3A-208ENST00000484246 METTL15A6NJ78 407 aa13.41□□□□□ -0.26
UPF3A-208ENST00000484246 ANKRD30BLA7E2S9 258 aa13.41□□□□□ -0.26
UPF3A-208ENST00000484246 F5H5P2 479 aa13.41□□□□□ -0.26
UPF3A-208ENST00000484246 LOC110117498-PIK3R3F6TDL0 507 aa13.41□□□□□ -0.26
UPF3A-208ENST00000484246 H0YJX3 145 aa13.41□□□□□ -0.26
UPF3A-208ENST00000484246 H0YL77 283 aa13.41□□□□□ -0.26
UPF3A-208ENST00000484246 WBP4O75554 376 aaKnown RBP13.41□□□□□ -0.26
UPF3A-208ENST00000484246 CST4P01036 141 aa13.41□□□□□ -0.26
UPF3A-208ENST00000484246 IGHA1P01876 353 aa13.41□□□□□ -0.26
UPF3A-208ENST00000484246 TTRP02766 147 aa13.41□□□□□ -0.26
UPF3A-208ENST00000484246 HLA-DPB1P04440 258 aa13.41□□□□□ -0.26
UPF3A-208ENST00000484246 CA6P23280 308 aa13.41□□□□□ -0.26
UPF3A-208ENST00000484246 ACKR3P25106 362 aa13.41□□□□□ -0.26
UPF3A-208ENST00000484246 MZT1Q08AG7 82 aa13.41□□□□□ -0.26
UPF3A-208ENST00000484246 RAB40BQ12829 278 aa13.41□□□□□ -0.26
UPF3A-208ENST00000484246 MAB21L1Q13394 359 aa13.41□□□□□ -0.26
UPF3A-208ENST00000484246 OR8G1Q15617 311 aa13.41□□□□□ -0.26
UPF3A-208ENST00000484246 CDONQ4KMG0 1287 aa13.41□□□□□ -0.26
UPF3A-208ENST00000484246 ZBTB37Q5TC79 503 aa13.41□□□□□ -0.26
UPF3A-208ENST00000484246 LIPNQ5VXI9 398 aa13.41□□□□□ -0.26
UPF3A-208ENST00000484246 PLEKHG7Q6ZR37 379 aa13.41□□□□□ -0.26
UPF3A-208ENST00000484246 ELMOD2Q8IZ81 293 aa13.41□□□□□ -0.26
UPF3A-208ENST00000484246 DHRSXQ8N5I4 330 aa13.41□□□□□ -0.26
UPF3A-208ENST00000484246 ACBD7Q8N6N7 88 aa13.41□□□□□ -0.26
UPF3A-208ENST00000484246 RAB1CQ92928 201 aa13.41□□□□□ -0.26
UPF3A-208ENST00000484246 LGALS12Q96DT0 336 aa13.41□□□□□ -0.26
UPF3A-208ENST00000484246 TBX5Q99593 518 aa13.41□□□□□ -0.26
UPF3A-208ENST00000484246 JAM3Q9BX67 310 aa13.41□□□□□ -0.26
UPF3A-208ENST00000484246 INPP5EQ9NRR6 644 aa13.41□□□□□ -0.26
UPF3A-208ENST00000484246 NKX1-2Q9UD57 310 aaPredicted RBP13.41□□□□□ -0.26
UPF3A-208ENST00000484246 RPL36Q9Y3U8 105 aaKnown RBP13.41□□□□□ -0.26
UPF3A-208ENST00000484246 SNX5Q9Y5X3 404 aa13.41□□□□□ -0.26
UPF3A-208ENST00000484246 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.4□□□□□ -0.26
UPF3A-208ENST00000484246 LRP5LA4QPB2 252 aa13.4□□□□□ -0.26
UPF3A-208ENST00000484246 DHRS7CA6NNS2 312 aa13.4□□□□□ -0.26
UPF3A-208ENST00000484246 IGHV2-70P01814 119 aa13.4□□□□□ -0.26
UPF3A-208ENST00000484246 CCL1P22362 96 aa13.4□□□□□ -0.26
UPF3A-208ENST00000484246 CAPGP40121 348 aa13.4□□□□□ -0.26
UPF3A-208ENST00000484246 C6orf52Q5T4I8 152 aa13.4□□□□□ -0.26
UPF3A-208ENST00000484246 KCTD20Q7Z5Y7 419 aa13.4□□□□□ -0.26
UPF3A-208ENST00000484246 CLDND2Q8NHS1 167 aa13.4□□□□□ -0.26
UPF3A-208ENST00000484246 MYCBPQ99417 103 aaPredicted RBP13.4□□□□□ -0.26
UPF3A-208ENST00000484246 AASSQ9UDR5 926 aa13.4□□□□□ -0.26
UPF3A-208ENST00000484246 OR52A1Q9UKL2 312 aa13.4□□□□□ -0.26
UPF3A-208ENST00000484246 MPC1Q9Y5U8 109 aa13.4□□□□□ -0.26
UPF3A-208ENST00000484246 NPTNQ9Y639 398 aa13.4□□□□□ -0.26
UPF3A-208ENST00000484246 TMEM178BH3BS89 294 aa13.39□□□□□ -0.27
UPF3A-208ENST00000484246 MAGEB4O15481 346 aaPredicted RBP13.39□□□□□ -0.27
UPF3A-208ENST00000484246 FADS2O95864 444 aaKnown RBP13.39□□□□□ -0.27
UPF3A-208ENST00000484246 LMO4P61968 165 aa13.39□□□□□ -0.27
UPF3A-208ENST00000484246 ACTA2P62736 377 aa13.39□□□□□ -0.27
UPF3A-208ENST00000484246 ACTG2P63267 376 aa13.39□□□□□ -0.27
UPF3A-208ENST00000484246 IL5RAQ01344 420 aa13.39□□□□□ -0.27
UPF3A-208ENST00000484246 GFOD2Q3B7J2 385 aa13.39□□□□□ -0.27
UPF3A-208ENST00000484246 TMEM155Q4W5P6 130 aa13.39□□□□□ -0.27
UPF3A-208ENST00000484246 BCL2L15Q5TBC7 163 aa13.39□□□□□ -0.27
UPF3A-208ENST00000484246 CYB5R2Q6BCY4 276 aa13.39□□□□□ -0.27
UPF3A-208ENST00000484246 FDX2Q6P4F2 183 aa13.39□□□□□ -0.27
UPF3A-208ENST00000484246 FAM220AQ7Z4H9 259 aa13.39□□□□□ -0.27
UPF3A-208ENST00000484246 PEG10Q86TG7 708 aaKnown RBP13.39□□□□□ -0.27
UPF3A-208ENST00000484246 CATSPERDQ86XM0 798 aa13.39□□□□□ -0.27
UPF3A-208ENST00000484246 FBLIM1Q8WUP2 373 aa13.39□□□□□ -0.27
UPF3A-208ENST00000484246 CYGBQ8WWM9 190 aa13.39□□□□□ -0.27
UPF3A-208ENST00000484246 RORBQ92753 470 aa13.39□□□□□ -0.27
UPF3A-208ENST00000484246 RNF166Q96A37 237 aaPredicted RBP13.39□□□□□ -0.27
UPF3A-208ENST00000484246 MRPL48Q96GC5 212 aaKnown RBP13.39□□□□□ -0.27
UPF3A-208ENST00000484246 ZNF649Q9BS31 505 aa13.39□□□□□ -0.27
UPF3A-208ENST00000484246 GPR84Q9NQS5 396 aa13.39□□□□□ -0.27
UPF3A-208ENST00000484246 DCAF16Q9NXF7 216 aa13.39□□□□□ -0.27
UPF3A-208ENST00000484246 ZNF816-ZNF321PA0A0X1KG74 233 aa13.38□□□□□ -0.27
UPF3A-208ENST00000484246 DAPL1A0PJW8 107 aa13.38□□□□□ -0.27
UPF3A-208ENST00000484246 WNT9BO14905 357 aa13.38□□□□□ -0.27
UPF3A-208ENST00000484246 FAM20BO75063 409 aa13.38□□□□□ -0.27
UPF3A-208ENST00000484246 DHRS3O75911 302 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms