RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 TMEM269A0A1B0GVZ9 245 aa15.15■□□□□ 0.02
HDAC6-225ENST00000483506 ANKRD30BLA7E2S9 258 aa15.15■□□□□ 0.02
HDAC6-225ENST00000483506 ZNF670-ZNF695F2Z2N8 137 aa15.15■□□□□ 0.02
HDAC6-225ENST00000483506 PSMD9O00233 223 aa15.15■□□□□ 0.02
HDAC6-225ENST00000483506 BAG2O95816 211 aa15.15■□□□□ 0.02
HDAC6-225ENST00000483506 OR2T7P0C7T2 308 aa15.15■□□□□ 0.02
HDAC6-225ENST00000483506 GABRB1P18505 474 aa15.15■□□□□ 0.02
HDAC6-225ENST00000483506 PMELP40967 661 aa15.15■□□□□ 0.02
HDAC6-225ENST00000483506 BTG1P62324 171 aa15.15■□□□□ 0.02
HDAC6-225ENST00000483506 MEDAGQ5VYS4 303 aa15.15■□□□□ 0.02
HDAC6-225ENST00000483506 MOGAT3Q86VF5 341 aa15.15■□□□□ 0.02
HDAC6-225ENST00000483506 LRRC28Q86X40 367 aaPredicted RBP15.15■□□□□ 0.02
HDAC6-225ENST00000483506 OR2T27Q8NH04 317 aa15.15■□□□□ 0.02
HDAC6-225ENST00000483506 LYZL4Q96KX0 146 aa15.15■□□□□ 0.02
HDAC6-225ENST00000483506 MOB1AQ9H8S9 216 aa15.15■□□□□ 0.02
HDAC6-225ENST00000483506 C8orf4Q9NR00 106 aa15.15■□□□□ 0.02
HDAC6-225ENST00000483506 NUFIP1Q9UHK0 495 aaKnown RBP15.15■□□□□ 0.02
HDAC6-225ENST00000483506 MRM2Q9UI43 246 aaKnown RBP15.15■□□□□ 0.02
HDAC6-225ENST00000483506 CDC42EP3Q9UKI2 254 aa15.15■□□□□ 0.02
HDAC6-225ENST00000483506 GMPPBQ9Y5P6 360 aa15.15■□□□□ 0.02
HDAC6-225ENST00000483506 DLGAP1O14490 977 aa15.14■□□□□ 0.01
HDAC6-225ENST00000483506 SLC16A6O15403 523 aa15.14■□□□□ 0.01
HDAC6-225ENST00000483506 ENTPD6O75354 484 aa15.14■□□□□ 0.01
HDAC6-225ENST00000483506 MSMBP08118 114 aa15.14■□□□□ 0.01
HDAC6-225ENST00000483506 MZT1Q08AG7 82 aa15.14■□□□□ 0.01
HDAC6-225ENST00000483506 ZMYND11Q15326 602 aa15.14■□□□□ 0.01
HDAC6-225ENST00000483506 ZNF684Q5T5D7 378 aa15.14■□□□□ 0.01
HDAC6-225ENST00000483506 FTMTQ8N4E7 242 aa15.14■□□□□ 0.01
HDAC6-225ENST00000483506 SPICQ8N5J4 248 aa15.14■□□□□ 0.01
HDAC6-225ENST00000483506 ZNF420Q8TAQ5 688 aaPredicted RBP15.14■□□□□ 0.01
HDAC6-225ENST00000483506 GAL3ST1Q99999 423 aa15.14■□□□□ 0.01
HDAC6-225ENST00000483506 TTTY10Q9BZA0 68 aa15.14■□□□□ 0.01
HDAC6-225ENST00000483506 PBOV1Q9GZY1 135 aa15.14■□□□□ 0.01
HDAC6-225ENST00000483506 LPAR3Q9UBY5 353 aa15.14■□□□□ 0.01
HDAC6-225ENST00000483506 IKZF2Q9UKS7 526 aa15.14■□□□□ 0.01
HDAC6-225ENST00000483506 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.13■□□□□ 0.01
HDAC6-225ENST00000483506 LOC100130705A0A1B0GUX0 176 aa15.13■□□□□ 0.01
HDAC6-225ENST00000483506 A0A1W2PQL4 384 aaPredicted RBP15.13■□□□□ 0.01
HDAC6-225ENST00000483506 LRRC30A6NM36 301 aa15.13■□□□□ 0.01
HDAC6-225ENST00000483506 J3QRE1 110 aa15.13■□□□□ 0.01
HDAC6-225ENST00000483506 MPZL2O60487 215 aa15.13■□□□□ 0.01
HDAC6-225ENST00000483506 CST4P01036 141 aa15.13■□□□□ 0.01
HDAC6-225ENST00000483506 ANPEPP15144 967 aa15.13■□□□□ 0.01
HDAC6-225ENST00000483506 ATP6V1B1P15313 513 aa15.13■□□□□ 0.01
HDAC6-225ENST00000483506 CPT2P23786 658 aa15.13■□□□□ 0.01
HDAC6-225ENST00000483506 ACKR3P25106 362 aa15.13■□□□□ 0.01
HDAC6-225ENST00000483506 RBMXP38159 391 aaKnown RBP15.13■□□□□ 0.01
HDAC6-225ENST00000483506 MDH2P40926 338 aaKnown RBP15.13■□□□□ 0.01
HDAC6-225ENST00000483506 MTNR1AP48039 350 aa15.13■□□□□ 0.01
HDAC6-225ENST00000483506 MFGE8Q08431 387 aaPredicted RBP15.13■□□□□ 0.01
HDAC6-225ENST00000483506 RCN1Q15293 331 aa15.13■□□□□ 0.01
HDAC6-225ENST00000483506 GFOD2Q3B7J2 385 aa15.13■□□□□ 0.01
HDAC6-225ENST00000483506 SSX6Q7RTT6 188 aa15.13■□□□□ 0.01
HDAC6-225ENST00000483506 ENTHD1Q8IYW4 607 aa15.13■□□□□ 0.01
HDAC6-225ENST00000483506 C1orf87Q8N0U7 546 aa15.13■□□□□ 0.01
HDAC6-225ENST00000483506 MUC20Q8N307 709 aaPredicted RBP15.13■□□□□ 0.01
HDAC6-225ENST00000483506 OR51F2Q8NH61 342 aa15.13■□□□□ 0.01
HDAC6-225ENST00000483506 APOL4Q9BPW4 351 aa15.13■□□□□ 0.01
HDAC6-225ENST00000483506 G6PC2Q9NQR9 355 aa15.13■□□□□ 0.01
HDAC6-225ENST00000483506 FAM118AQ9NWS6 357 aa15.13■□□□□ 0.01
HDAC6-225ENST00000483506 SMPD3Q9NY59 655 aaPredicted RBP15.13■□□□□ 0.01
HDAC6-225ENST00000483506 RHBDD3Q9Y3P4 386 aa15.13■□□□□ 0.01
HDAC6-225ENST00000483506 R4GMQ9 66 aa15.13■□□□□ 0.01
HDAC6-225ENST00000483506 ISPDA4D126 451 aa15.12■□□□□ 0.01
HDAC6-225ENST00000483506 F5H0A9 414 aaPredicted RBP15.12■□□□□ 0.01
HDAC6-225ENST00000483506 SULT1C4O75897 302 aa15.12■□□□□ 0.01
HDAC6-225ENST00000483506 CYB5R3P00387 301 aaPredicted RBP15.12■□□□□ 0.01
HDAC6-225ENST00000483506 PNPP00491 289 aa15.12■□□□□ 0.01
HDAC6-225ENST00000483506 ISL1P61371 349 aa15.12■□□□□ 0.01
HDAC6-225ENST00000483506 MPPED2Q15777 294 aa15.12■□□□□ 0.01
HDAC6-225ENST00000483506 CHRFAM7AQ494W8 412 aa15.12■□□□□ 0.01
HDAC6-225ENST00000483506 PRAMEF6Q5VXH4 476 aa15.12■□□□□ 0.01
HDAC6-225ENST00000483506 GLCCI1Q86VQ1 547 aa15.12■□□□□ 0.01
HDAC6-225ENST00000483506 PACRGLQ8N7B6 248 aa15.12■□□□□ 0.01
HDAC6-225ENST00000483506 RHOXF1Q8NHV9 184 aa15.12■□□□□ 0.01
HDAC6-225ENST00000483506 DVL3Q92997 716 aaPredicted RBP15.12■□□□□ 0.01
HDAC6-225ENST00000483506 TMEM186Q96B77 213 aa15.12■□□□□ 0.01
HDAC6-225ENST00000483506 ITPKCQ96DU7 683 aa15.12■□□□□ 0.01
HDAC6-225ENST00000483506 FN3KRPQ9HA64 309 aa15.12■□□□□ 0.01
HDAC6-225ENST00000483506 ABCB9Q9NP78 766 aa15.12■□□□□ 0.01
HDAC6-225ENST00000483506 C14orf119Q9NWQ9 140 aa15.12■□□□□ 0.01
HDAC6-225ENST00000483506 MPC1Q9Y5U8 109 aa15.12■□□□□ 0.01
HDAC6-225ENST00000483506 MXRA5Q9NR99 2828 aa15.12■□□□□ 0.01
HDAC6-225ENST00000483506 TRAV20A0A0B4J274 112 aa15.11■□□□□ 0.01
HDAC6-225ENST00000483506 IGHV3-64DA0A0J9YX35 117 aa15.11■□□□□ 0.01
HDAC6-225ENST00000483506 SNTNA6NMZ2 147 aa15.11■□□□□ 0.01
HDAC6-225ENST00000483506 LOC110117498-PIK3R3F6TDL0 507 aa15.11■□□□□ 0.01
HDAC6-225ENST00000483506 MAGEB4O15481 346 aaPredicted RBP15.11■□□□□ 0.01
HDAC6-225ENST00000483506 FAM20BO75063 409 aa15.11■□□□□ 0.01
HDAC6-225ENST00000483506 APOL3O95236 402 aa15.11■□□□□ 0.01
HDAC6-225ENST00000483506 KRT8P05787 483 aa15.11■□□□□ 0.01
HDAC6-225ENST00000483506 PCMT1P22061 227 aa15.11■□□□□ 0.01
HDAC6-225ENST00000483506 CR1LQ2VPA4 569 aa15.11■□□□□ 0.01
HDAC6-225ENST00000483506 FAM120AOSQ5T036 256 aa15.11■□□□□ 0.01
HDAC6-225ENST00000483506 ZBTB37Q5TC79 503 aa15.11■□□□□ 0.01
HDAC6-225ENST00000483506 Q6ZSR3 168 aa15.11■□□□□ 0.01
HDAC6-225ENST00000483506 ELMOD2Q8IZ81 293 aa15.11■□□□□ 0.01
HDAC6-225ENST00000483506 KLHL36Q8N4N3 616 aa15.11■□□□□ 0.01
HDAC6-225ENST00000483506 OR10H4Q8NGA5 316 aa15.11■□□□□ 0.01
HDAC6-225ENST00000483506 OR11L1Q8NGX0 322 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms