RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 CSPG4Q6UVK1 2322 aa17.7■□□□□ 0.42
SEC13-217ENST00000482647 RPP14O95059 124 aaKnown RBP17.69■□□□□ 0.42
SEC13-217ENST00000482647 FADS2O95864 444 aaKnown RBP17.69■□□□□ 0.42
SEC13-217ENST00000482647 HEXAP06865 529 aa17.69■□□□□ 0.42
SEC13-217ENST00000482647 CAPGP40121 348 aa17.69■□□□□ 0.42
SEC13-217ENST00000482647 ZNF85Q03923 595 aa17.69■□□□□ 0.42
SEC13-217ENST00000482647 MZT1Q08AG7 82 aa17.69■□□□□ 0.42
SEC13-217ENST00000482647 RAB40BQ12829 278 aa17.69■□□□□ 0.42
SEC13-217ENST00000482647 ZNF684Q5T5D7 378 aa17.69■□□□□ 0.42
SEC13-217ENST00000482647 BCL2L15Q5TBC7 163 aa17.69■□□□□ 0.42
SEC13-217ENST00000482647 LIPNQ5VXI9 398 aa17.69■□□□□ 0.42
SEC13-217ENST00000482647 KCTD20Q7Z5Y7 419 aa17.69■□□□□ 0.42
SEC13-217ENST00000482647 CELF2-AS1Q8N7Q2 184 aa17.69■□□□□ 0.42
SEC13-217ENST00000482647 SPERTQ8NA61 448 aa17.69■□□□□ 0.42
SEC13-217ENST00000482647 ADAT1Q9BUB4 502 aaKnown RBP17.69■□□□□ 0.42
SEC13-217ENST00000482647 GCM1Q9NP62 436 aa17.69■□□□□ 0.42
SEC13-217ENST00000482647 TMEM106BQ9NUM4 274 aa17.69■□□□□ 0.42
SEC13-217ENST00000482647 OR52A1Q9UKL2 312 aa17.69■□□□□ 0.42
SEC13-217ENST00000482647 GTF2A1LQ9UNN4 478 aa17.69■□□□□ 0.42
SEC13-217ENST00000482647 HSPE1-MOB4S4R3N1 261 aa17.69■□□□□ 0.42
SEC13-217ENST00000482647 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.68■□□□□ 0.42
SEC13-217ENST00000482647 IFNL4K9M1U5 179 aa17.68■□□□□ 0.42
SEC13-217ENST00000482647 SRSF10O75494 262 aaKnown RBP17.68■□□□□ 0.42
SEC13-217ENST00000482647 WBP4O75554 376 aaKnown RBP17.68■□□□□ 0.42
SEC13-217ENST00000482647 PNPP00491 289 aa17.68■□□□□ 0.42
SEC13-217ENST00000482647 MFGE8Q08431 387 aaPredicted RBP17.68■□□□□ 0.42
SEC13-217ENST00000482647 OR8B8Q15620 311 aa17.68■□□□□ 0.42
SEC13-217ENST00000482647 KLHL22Q53GT1 634 aa17.68■□□□□ 0.42
SEC13-217ENST00000482647 ZNF771Q7L3S4 317 aaPredicted RBP17.68■□□□□ 0.42
SEC13-217ENST00000482647 FAM220AQ7Z4H9 259 aa17.68■□□□□ 0.42
SEC13-217ENST00000482647 COMMD2Q86X83 199 aa17.68■□□□□ 0.42
SEC13-217ENST00000482647 HPS1Q92902 700 aa17.68■□□□□ 0.42
SEC13-217ENST00000482647 MRPL48Q96GC5 212 aaKnown RBP17.68■□□□□ 0.42
SEC13-217ENST00000482647 LYZL4Q96KX0 146 aa17.68■□□□□ 0.42
SEC13-217ENST00000482647 G6PC2Q9NQR9 355 aa17.68■□□□□ 0.42
SEC13-217ENST00000482647 MRPS18AQ9NVS2 196 aaKnown RBP17.68■□□□□ 0.42
SEC13-217ENST00000482647 GNG8Q9UK08 70 aa17.68■□□□□ 0.42
SEC13-217ENST00000482647 LRP5LA4QPB2 252 aa17.67■□□□□ 0.42
SEC13-217ENST00000482647 GNALP38405 381 aa17.67■□□□□ 0.42
SEC13-217ENST00000482647 CD200P41217 278 aa17.67■□□□□ 0.42
SEC13-217ENST00000482647 ISL1P61371 349 aa17.67■□□□□ 0.42
SEC13-217ENST00000482647 MVKQ03426 396 aa17.67■□□□□ 0.42
SEC13-217ENST00000482647 MAB21L1Q13394 359 aa17.67■□□□□ 0.42
SEC13-217ENST00000482647 ELMOD2Q8IZ81 293 aa17.67■□□□□ 0.42
SEC13-217ENST00000482647 OR51E1Q8TCB6 317 aa17.67■□□□□ 0.42
SEC13-217ENST00000482647 NRG4Q8WWG1 115 aa17.67■□□□□ 0.42
SEC13-217ENST00000482647 ERGIC1Q969X5 290 aa17.67■□□□□ 0.42
SEC13-217ENST00000482647 PPP1R14AQ96A00 147 aa17.67■□□□□ 0.42
SEC13-217ENST00000482647 GPR84Q9NQS5 396 aa17.67■□□□□ 0.42
SEC13-217ENST00000482647 RHBDD3Q9Y3P4 386 aa17.67■□□□□ 0.42
SEC13-217ENST00000482647 LRRC30A6NM36 301 aa17.66■□□□□ 0.42
SEC13-217ENST00000482647 H0YJX3 145 aa17.66■□□□□ 0.42
SEC13-217ENST00000482647 ATP6V1B1P15313 513 aa17.66■□□□□ 0.42
SEC13-217ENST00000482647 GATA4P43694 442 aa17.66■□□□□ 0.42
SEC13-217ENST00000482647 MAP2K3P46734 347 aa17.66■□□□□ 0.42
SEC13-217ENST00000482647 GZMKP49863 264 aa17.66■□□□□ 0.42
SEC13-217ENST00000482647 ACTA2P62736 377 aa17.66■□□□□ 0.42
SEC13-217ENST00000482647 ACTG2P63267 376 aa17.66■□□□□ 0.42
SEC13-217ENST00000482647 SMN1Q16637 294 aaKnown RBP17.66■□□□□ 0.42
SEC13-217ENST00000482647 CDONQ4KMG0 1287 aa17.66■□□□□ 0.42
SEC13-217ENST00000482647 TP53I3Q53FA7 332 aa17.66■□□□□ 0.42
SEC13-217ENST00000482647 AVPI1Q5T686 147 aa17.66■□□□□ 0.42
SEC13-217ENST00000482647 CYB5R2Q6BCY4 276 aa17.66■□□□□ 0.42
SEC13-217ENST00000482647 MOGAT3Q86VF5 341 aa17.66■□□□□ 0.42
SEC13-217ENST00000482647 C8orf59Q8N0T1 100 aaPredicted RBP17.66■□□□□ 0.42
SEC13-217ENST00000482647 PLPP7Q8NBV4 271 aa17.66■□□□□ 0.42
SEC13-217ENST00000482647 OR8S1Q8NH09 359 aa17.66■□□□□ 0.42
SEC13-217ENST00000482647 CNIH3Q8TBE1 160 aa17.66■□□□□ 0.42
SEC13-217ENST00000482647 RORBQ92753 470 aa17.66■□□□□ 0.42
SEC13-217ENST00000482647 TFAP2CQ92754 450 aa17.66■□□□□ 0.42
SEC13-217ENST00000482647 PAPOLGQ9BWT3 736 aaKnown RBP17.66■□□□□ 0.42
SEC13-217ENST00000482647 VCX3BQ9H321 246 aa17.66■□□□□ 0.42
SEC13-217ENST00000482647 INPP5EQ9NRR6 644 aa17.66■□□□□ 0.42
SEC13-217ENST00000482647 C14orf119Q9NWQ9 140 aa17.66■□□□□ 0.42
SEC13-217ENST00000482647 WIPI2Q9Y4P8 454 aa17.66■□□□□ 0.42
SEC13-217ENST00000482647 TLN2Q9Y4G6 2542 aa17.65■□□□□ 0.42
SEC13-217ENST00000482647 IGHV3-64DA0A0J9YX35 117 aa17.65■□□□□ 0.42
SEC13-217ENST00000482647 CD5LO43866 347 aa17.65■□□□□ 0.42
SEC13-217ENST00000482647 FAM20BO75063 409 aa17.65■□□□□ 0.42
SEC13-217ENST00000482647 MTRF1O75570 445 aaKnown RBP17.65■□□□□ 0.42
SEC13-217ENST00000482647 CST4P01036 141 aa17.65■□□□□ 0.42
SEC13-217ENST00000482647 IGLV3-1P01715 115 aa17.65■□□□□ 0.42
SEC13-217ENST00000482647 TTRP02766 147 aa17.65■□□□□ 0.42
SEC13-217ENST00000482647 ACKR3P25106 362 aa17.65■□□□□ 0.42
SEC13-217ENST00000482647 KRTAP1-1Q07627 177 aa17.65■□□□□ 0.42
SEC13-217ENST00000482647 Q71RC1 249 aaPredicted RBP17.65■□□□□ 0.42
SEC13-217ENST00000482647 CATSPERDQ86XM0 798 aa17.65■□□□□ 0.42
SEC13-217ENST00000482647 SEMA6DQ8NFY4 1073 aa17.65■□□□□ 0.42
SEC13-217ENST00000482647 FAM71F1Q96KD3 344 aaPredicted RBP17.65■□□□□ 0.42
SEC13-217ENST00000482647 SOX7Q9BT81 388 aa17.65■□□□□ 0.42
SEC13-217ENST00000482647 NARFLQ9H6Q4 476 aa17.65■□□□□ 0.42
SEC13-217ENST00000482647 ABCB9Q9NP78 766 aa17.65■□□□□ 0.42
SEC13-217ENST00000482647 ACOXLQ9NUZ1 547 aa17.65■□□□□ 0.42
SEC13-217ENST00000482647 MYRFQ9Y2G1 1151 aa17.65■□□□□ 0.42
SEC13-217ENST00000482647 MPC1Q9Y5U8 109 aa17.65■□□□□ 0.42
SEC13-217ENST00000482647 NPTNQ9Y639 398 aa17.65■□□□□ 0.42
SEC13-217ENST00000482647 IRGMA1A4Y4 181 aa17.64■□□□□ 0.41
SEC13-217ENST00000482647 IGHA1P01876 353 aa17.64■□□□□ 0.41
SEC13-217ENST00000482647 GNAO1P09471 354 aa17.64■□□□□ 0.41
SEC13-217ENST00000482647 IGHV4-31P0DP07 118 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms