RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 TMEM106BQ9NUM4 274 aa17.34■□□□□ 0.37
VARS-224ENST00000479051 NKX1-2Q9UD57 310 aaPredicted RBP17.34■□□□□ 0.37
VARS-224ENST00000479051 AASSQ9UDR5 926 aa17.34■□□□□ 0.37
VARS-224ENST00000479051 SNX5Q9Y5X3 404 aa17.34■□□□□ 0.37
VARS-224ENST00000479051 CACNG2Q9Y698 323 aa17.34■□□□□ 0.37
VARS-224ENST00000479051 H0YAE9 185 aa17.33■□□□□ 0.36
VARS-224ENST00000479051 FADS2O95864 444 aaKnown RBP17.33■□□□□ 0.36
VARS-224ENST00000479051 CAPGP40121 348 aa17.33■□□□□ 0.36
VARS-224ENST00000479051 CD200P41217 278 aa17.33■□□□□ 0.36
VARS-224ENST00000479051 MVKQ03426 396 aa17.33■□□□□ 0.36
VARS-224ENST00000479051 OR8B8Q15620 311 aa17.33■□□□□ 0.36
VARS-224ENST00000479051 CYB5R2Q6BCY4 276 aa17.33■□□□□ 0.36
VARS-224ENST00000479051 OR8S1Q8NH09 359 aa17.33■□□□□ 0.36
VARS-224ENST00000479051 ERGIC1Q969X5 290 aa17.33■□□□□ 0.36
VARS-224ENST00000479051 VCX3BQ9H321 246 aa17.33■□□□□ 0.36
VARS-224ENST00000479051 ABCB9Q9NP78 766 aa17.33■□□□□ 0.36
VARS-224ENST00000479051 C14orf119Q9NWQ9 140 aa17.33■□□□□ 0.36
VARS-224ENST00000479051 OR52A1Q9UKL2 312 aa17.33■□□□□ 0.36
VARS-224ENST00000479051 EXOGQ9Y2C4 368 aaKnown RBP17.33■□□□□ 0.36
VARS-224ENST00000479051 LRP5LA4QPB2 252 aa17.32■□□□□ 0.36
VARS-224ENST00000479051 LRRC30A6NM36 301 aa17.32■□□□□ 0.36
VARS-224ENST00000479051 MAGEB4O15481 346 aaPredicted RBP17.32■□□□□ 0.36
VARS-224ENST00000479051 CD5LO43866 347 aa17.32■□□□□ 0.36
VARS-224ENST00000479051 MTRF1O75570 445 aaKnown RBP17.32■□□□□ 0.36
VARS-224ENST00000479051 RPP14O95059 124 aaKnown RBP17.32■□□□□ 0.36
VARS-224ENST00000479051 ATP6V1B1P15313 513 aa17.32■□□□□ 0.36
VARS-224ENST00000479051 MAP2K3P46734 347 aa17.32■□□□□ 0.36
VARS-224ENST00000479051 ADARB1P78563 741 aaKnown RBP17.32■□□□□ 0.36
VARS-224ENST00000479051 MFGE8Q08431 387 aaPredicted RBP17.32■□□□□ 0.36
VARS-224ENST00000479051 RAB40BQ12829 278 aa17.32■□□□□ 0.36
VARS-224ENST00000479051 KLHL22Q53GT1 634 aa17.32■□□□□ 0.36
VARS-224ENST00000479051 SPRNQ5BIV9 151 aa17.32■□□□□ 0.36
VARS-224ENST00000479051 AVPI1Q5T686 147 aa17.32■□□□□ 0.36
VARS-224ENST00000479051 LIPNQ5VXI9 398 aa17.32■□□□□ 0.36
VARS-224ENST00000479051 KCTD20Q7Z5Y7 419 aa17.32■□□□□ 0.36
VARS-224ENST00000479051 OR11L1Q8NGX0 322 aa17.32■□□□□ 0.36
VARS-224ENST00000479051 LGALS12Q96DT0 336 aa17.32■□□□□ 0.36
VARS-224ENST00000479051 SIGLEC11Q96RL6 698 aa17.32■□□□□ 0.36
VARS-224ENST00000479051 PAPOLGQ9BWT3 736 aaKnown RBP17.32■□□□□ 0.36
VARS-224ENST00000479051 GCM1Q9NP62 436 aa17.32■□□□□ 0.36
VARS-224ENST00000479051 GNG8Q9UK08 70 aa17.32■□□□□ 0.36
VARS-224ENST00000479051 WIPI2Q9Y4P8 454 aa17.32■□□□□ 0.36
VARS-224ENST00000479051 HSPE1-MOB4S4R3N1 261 aa17.32■□□□□ 0.36
VARS-224ENST00000479051 IRGMA1A4Y4 181 aa17.31■□□□□ 0.36
VARS-224ENST00000479051 ISPDA4D126 451 aa17.31■□□□□ 0.36
VARS-224ENST00000479051 ANXA2P2A6NMY6 339 aa17.31■□□□□ 0.36
VARS-224ENST00000479051 CLIC3O95833 236 aa17.31■□□□□ 0.36
VARS-224ENST00000479051 IRF2P14316 349 aa17.31■□□□□ 0.36
VARS-224ENST00000479051 GATA4P43694 442 aa17.31■□□□□ 0.36
VARS-224ENST00000479051 ACTA2P62736 377 aa17.31■□□□□ 0.36
VARS-224ENST00000479051 ACTG2P63267 376 aa17.31■□□□□ 0.36
VARS-224ENST00000479051 ZNF85Q03923 595 aa17.31■□□□□ 0.36
VARS-224ENST00000479051 ZNF771Q7L3S4 317 aaPredicted RBP17.31■□□□□ 0.36
VARS-224ENST00000479051 MOGAT3Q86VF5 341 aa17.31■□□□□ 0.36
VARS-224ENST00000479051 C8orf59Q8N0T1 100 aaPredicted RBP17.31■□□□□ 0.36
VARS-224ENST00000479051 C1orf87Q8N0U7 546 aa17.31■□□□□ 0.36
VARS-224ENST00000479051 PLPP7Q8NBV4 271 aa17.31■□□□□ 0.36
VARS-224ENST00000479051 OR51E1Q8TCB6 317 aa17.31■□□□□ 0.36
VARS-224ENST00000479051 APH1BQ8WW43 257 aa17.31■□□□□ 0.36
VARS-224ENST00000479051 LYZL4Q96KX0 146 aa17.31■□□□□ 0.36
VARS-224ENST00000479051 NARFLQ9H6Q4 476 aa17.31■□□□□ 0.36
VARS-224ENST00000479051 AMBNQ9NP70 447 aa17.31■□□□□ 0.36
VARS-224ENST00000479051 GPR84Q9NQS5 396 aa17.31■□□□□ 0.36
VARS-224ENST00000479051 INPP5EQ9NRR6 644 aa17.31■□□□□ 0.36
VARS-224ENST00000479051 NPTNQ9Y639 398 aa17.31■□□□□ 0.36
VARS-224ENST00000479051 TANC2Q9HCD6 1990 aa17.31■□□□□ 0.36
VARS-224ENST00000479051 J3QRE1 110 aa17.3■□□□□ 0.36
VARS-224ENST00000479051 SRSF10O75494 262 aaKnown RBP17.3■□□□□ 0.36
VARS-224ENST00000479051 PNPP00491 289 aa17.3■□□□□ 0.36
VARS-224ENST00000479051 IGHV4-31P0DP07 118 aa17.3■□□□□ 0.36
VARS-224ENST00000479051 MAB21L1Q13394 359 aa17.3■□□□□ 0.36
VARS-224ENST00000479051 ZNF684Q5T5D7 378 aa17.3■□□□□ 0.36
VARS-224ENST00000479051 Q71RC1 249 aaPredicted RBP17.3■□□□□ 0.36
VARS-224ENST00000479051 THAP5Q7Z6K1 395 aa17.3■□□□□ 0.36
VARS-224ENST00000479051 ELMOD2Q8IZ81 293 aa17.3■□□□□ 0.36
VARS-224ENST00000479051 CLDND2Q8NHS1 167 aa17.3■□□□□ 0.36
VARS-224ENST00000479051 FAM71F1Q96KD3 344 aaPredicted RBP17.3■□□□□ 0.36
VARS-224ENST00000479051 FN3KRPQ9HA64 309 aa17.3■□□□□ 0.36
VARS-224ENST00000479051 MRPS18AQ9NVS2 196 aaKnown RBP17.3■□□□□ 0.36
VARS-224ENST00000479051 MPC1Q9Y5U8 109 aa17.3■□□□□ 0.36
VARS-224ENST00000479051 DYSFO75923 2080 aa17.29■□□□□ 0.36
VARS-224ENST00000479051 IGHV3-64DA0A0J9YX35 117 aa17.29■□□□□ 0.36
VARS-224ENST00000479051 ZNF816-ZNF321PA0A0X1KG74 233 aa17.29■□□□□ 0.36
VARS-224ENST00000479051 CST4P01036 141 aa17.29■□□□□ 0.36
VARS-224ENST00000479051 TTRP02766 147 aa17.29■□□□□ 0.36
VARS-224ENST00000479051 KRTAP1-1Q07627 177 aa17.29■□□□□ 0.36
VARS-224ENST00000479051 ZNF181Q2M3W8 571 aa17.29■□□□□ 0.36
VARS-224ENST00000479051 CDONQ4KMG0 1287 aa17.29■□□□□ 0.36
VARS-224ENST00000479051 TP53I3Q53FA7 332 aa17.29■□□□□ 0.36
VARS-224ENST00000479051 SEMA6DQ8NFY4 1073 aa17.29■□□□□ 0.36
VARS-224ENST00000479051 CNIH3Q8TBE1 160 aa17.29■□□□□ 0.36
VARS-224ENST00000479051 DVL3Q92997 716 aaPredicted RBP17.29■□□□□ 0.36
VARS-224ENST00000479051 RAB39BQ96DA2 213 aa17.29■□□□□ 0.36
VARS-224ENST00000479051 HIST1H2AAQ96QV6 131 aa17.29■□□□□ 0.36
VARS-224ENST00000479051 GAL3ST1Q99999 423 aa17.29■□□□□ 0.36
VARS-224ENST00000479051 MICU1Q9BPX6 476 aa17.29■□□□□ 0.36
VARS-224ENST00000479051 G6PC2Q9NQR9 355 aa17.29■□□□□ 0.36
VARS-224ENST00000479051 RHBDD3Q9Y3P4 386 aa17.29■□□□□ 0.36
VARS-224ENST00000479051 H0YJX3 145 aa17.28■□□□□ 0.36
VARS-224ENST00000479051 TMEM178BH3BS89 294 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms