RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 RDH10Q8IZV5 341 aa17.01■□□□□ 0.31
ACTB-210ENST00000477812 OR5AS1Q8N127 324 aa17.01■□□□□ 0.31
ACTB-210ENST00000477812 BHLHE23Q8NDY6 225 aa17.01■□□□□ 0.31
ACTB-210ENST00000477812 RGP1Q92546 391 aaPredicted RBP17.01■□□□□ 0.31
ACTB-210ENST00000477812 ITFG2Q969R8 447 aa17.01■□□□□ 0.31
ACTB-210ENST00000477812 SMIM19Q96E16 107 aa17.01■□□□□ 0.31
ACTB-210ENST00000477812 CACNG6Q9BXT2 260 aa17.01■□□□□ 0.31
ACTB-210ENST00000477812 CGGBP1Q9UFW8 167 aaPredicted RBP17.01■□□□□ 0.31
ACTB-210ENST00000477812 PLEKHA6Q9Y2H5 1048 aa17.01■□□□□ 0.31
ACTB-210ENST00000477812 V9GYS6 101 aa17.01■□□□□ 0.31
ACTB-210ENST00000477812 USF3Q68DE3 2245 aa17.01■□□□□ 0.31
ACTB-210ENST00000477812 ANKRD17O75179 2603 aaKnown RBP17■□□□□ 0.31
ACTB-210ENST00000477812 SETXQ7Z333 2677 aaKnown RBP17■□□□□ 0.31
ACTB-210ENST00000477812 TRBV2A0A0J9YWF9 115 aa17■□□□□ 0.31
ACTB-210ENST00000477812 TMEM212A6NML5 194 aa17■□□□□ 0.31
ACTB-210ENST00000477812 DDOSTP39656 456 aa17■□□□□ 0.31
ACTB-210ENST00000477812 TAS2R43P59537 309 aa17■□□□□ 0.31
ACTB-210ENST00000477812 MOGQ16653 247 aa17■□□□□ 0.31
ACTB-210ENST00000477812 NKPD1Q17RQ9 610 aa17■□□□□ 0.31
ACTB-210ENST00000477812 ODF4Q2M2E3 257 aa17■□□□□ 0.31
ACTB-210ENST00000477812 DOK3Q7L591 496 aa17■□□□□ 0.31
ACTB-210ENST00000477812 ZFP41Q8N8Y5 198 aa17■□□□□ 0.31
ACTB-210ENST00000477812 OR8G5Q8NG78 346 aa17■□□□□ 0.31
ACTB-210ENST00000477812 OR14K1Q8NGZ2 314 aa17■□□□□ 0.31
ACTB-210ENST00000477812 OR10AC1Q8NH08 325 aa17■□□□□ 0.31
ACTB-210ENST00000477812 FAM71F1Q96KD3 344 aaPredicted RBP17■□□□□ 0.31
ACTB-210ENST00000477812 PGLYRP3Q96LB9 341 aa17■□□□□ 0.31
ACTB-210ENST00000477812 NR1H4Q96RI1 486 aaPredicted RBP17■□□□□ 0.31
ACTB-210ENST00000477812 PDCD1LG2Q9BQ51 273 aa17■□□□□ 0.31
ACTB-210ENST00000477812 SLC30A2Q9BRI3 323 aa17■□□□□ 0.31
ACTB-210ENST00000477812 MSL2Q9HCI7 577 aa17■□□□□ 0.31
ACTB-210ENST00000477812 ZNF701Q9NV72 531 aaPredicted RBP17■□□□□ 0.31
ACTB-210ENST00000477812 FBXO9Q9UK97 447 aaPredicted RBP17■□□□□ 0.31
ACTB-210ENST00000477812 NOTCH2Q04721 2471 aa16.99■□□□□ 0.31
ACTB-210ENST00000477812 GGT3PA6NGU5 568 aa16.99■□□□□ 0.31
ACTB-210ENST00000477812 DHRS7CA6NNS2 312 aa16.99■□□□□ 0.31
ACTB-210ENST00000477812 DHRS3O75911 302 aa16.99■□□□□ 0.31
ACTB-210ENST00000477812 NAT2P11245 290 aa16.99■□□□□ 0.31
ACTB-210ENST00000477812 ATP6V1B1P15313 513 aa16.99■□□□□ 0.31
ACTB-210ENST00000477812 PAX1P15863 534 aa16.99■□□□□ 0.31
ACTB-210ENST00000477812 ACHEP22303 614 aa16.99■□□□□ 0.31
ACTB-210ENST00000477812 LIPAP38571 399 aa16.99■□□□□ 0.31
ACTB-210ENST00000477812 MED22Q15528 200 aa16.99■□□□□ 0.31
ACTB-210ENST00000477812 TMEM244Q5VVB8 128 aa16.99■□□□□ 0.31
ACTB-210ENST00000477812 COMMD2Q86X83 199 aa16.99■□□□□ 0.31
ACTB-210ENST00000477812 ZCCHC24Q8N2G6 241 aaKnown RBP16.99■□□□□ 0.31
ACTB-210ENST00000477812 PIGTQ969N2 578 aa16.99■□□□□ 0.31
ACTB-210ENST00000477812 DYNLRB1Q9NP97 96 aa16.99■□□□□ 0.31
ACTB-210ENST00000477812 CYSLTR2Q9NS75 346 aa16.99■□□□□ 0.31
ACTB-210ENST00000477812 MRPL15Q9P015 296 aaKnown RBP16.99■□□□□ 0.31
ACTB-210ENST00000477812 GPR160Q9UJ42 338 aa16.99■□□□□ 0.31
ACTB-210ENST00000477812 A0A1B0GVI7 797 aa16.98■□□□□ 0.31
ACTB-210ENST00000477812 C17orf100A8MU93 164 aa16.98■□□□□ 0.31
ACTB-210ENST00000477812 SYT7O43581 403 aa16.98■□□□□ 0.31
ACTB-210ENST00000477812 PLPP2O43688 288 aa16.98■□□□□ 0.31
ACTB-210ENST00000477812 ADH4P08319 380 aa16.98■□□□□ 0.31
ACTB-210ENST00000477812 CDKN1AP38936 164 aa16.98■□□□□ 0.31
ACTB-210ENST00000477812 UBE2UQ5VVX9 321 aa16.98■□□□□ 0.31
ACTB-210ENST00000477812 ZNF367Q7RTV3 350 aa16.98■□□□□ 0.31
ACTB-210ENST00000477812 SVOPQ8N4V2 548 aa16.98■□□□□ 0.31
ACTB-210ENST00000477812 ZNF676Q8N7Q3 588 aa16.98■□□□□ 0.31
ACTB-210ENST00000477812 OR51A4Q8NGJ6 313 aa16.98■□□□□ 0.31
ACTB-210ENST00000477812 OR5AK2Q8NH90 309 aa16.98■□□□□ 0.31
ACTB-210ENST00000477812 NINJ1Q92982 152 aa16.98■□□□□ 0.31
ACTB-210ENST00000477812 MBD6Q96DN6 1003 aa16.98■□□□□ 0.31
ACTB-210ENST00000477812 OPALINQ96PE5 141 aa16.98■□□□□ 0.31
ACTB-210ENST00000477812 ISYNA1Q9NPH2 558 aa16.98■□□□□ 0.31
ACTB-210ENST00000477812 PLSCR5A0PG75 271 aa16.97■□□□□ 0.31
ACTB-210ENST00000477812 TRIM64CA6NLI5 447 aa16.97■□□□□ 0.31
ACTB-210ENST00000477812 MLNRO43193 412 aa16.97■□□□□ 0.31
ACTB-210ENST00000477812 LMX1BO60663 402 aa16.97■□□□□ 0.31
ACTB-210ENST00000477812 CST4P01036 141 aa16.97■□□□□ 0.31
ACTB-210ENST00000477812 IGHV1-46P01743 117 aa16.97■□□□□ 0.31
ACTB-210ENST00000477812 CD1AP06126 327 aa16.97■□□□□ 0.31
ACTB-210ENST00000477812 BMP4P12644 408 aa16.97■□□□□ 0.31
ACTB-210ENST00000477812 MAP2K3P46734 347 aa16.97■□□□□ 0.31
ACTB-210ENST00000477812 ZNF81P51508 661 aa16.97■□□□□ 0.31
ACTB-210ENST00000477812 MLLT11Q13015 90 aaPredicted RBP16.97■□□□□ 0.31
ACTB-210ENST00000477812 ZMAT1Q5H9K5 638 aa16.97■□□□□ 0.31
ACTB-210ENST00000477812 ZBTB37Q5TC79 503 aa16.97■□□□□ 0.31
ACTB-210ENST00000477812 CCDC54Q8NEL0 328 aa16.97■□□□□ 0.31
ACTB-210ENST00000477812 CSNK2A3Q8NEV1 391 aa16.97■□□□□ 0.31
ACTB-210ENST00000477812 SEMA6DQ8NFY4 1073 aa16.97■□□□□ 0.31
ACTB-210ENST00000477812 GHSRQ92847 366 aa16.97■□□□□ 0.31
ACTB-210ENST00000477812 SORCS2Q96PQ0 1159 aa16.97■□□□□ 0.31
ACTB-210ENST00000477812 MS4A5Q9H3V2 200 aa16.97■□□□□ 0.31
ACTB-210ENST00000477812 CXorf56Q9H5V9 222 aa16.97■□□□□ 0.31
ACTB-210ENST00000477812 PPP1R3EQ9H7J1 279 aa16.97■□□□□ 0.31
ACTB-210ENST00000477812 HHLA2Q9UM44 414 aa16.97■□□□□ 0.31
ACTB-210ENST00000477812 RHBDD3Q9Y3P4 386 aa16.97■□□□□ 0.31
ACTB-210ENST00000477812 PMF1-BGLAPU3KQ54 211 aa16.97■□□□□ 0.31
ACTB-210ENST00000477812 CSMD1Q96PZ7 3565 aa16.96■□□□□ 0.31
ACTB-210ENST00000477812 H3BSH0 61 aa16.96■□□□□ 0.31
ACTB-210ENST00000477812 MTRF1O75570 445 aaKnown RBP16.96■□□□□ 0.31
ACTB-210ENST00000477812 FAHP16930 419 aa16.96■□□□□ 0.31
ACTB-210ENST00000477812 CELP19835 753 aa16.96■□□□□ 0.31
ACTB-210ENST00000477812 RPS11P62280 158 aaKnown RBP eCLIP16.96■□□□□ 0.311e-9■□□□□ 9
ACTB-210ENST00000477812 SLC3A1Q07837 685 aa16.96■□□□□ 0.31
ACTB-210ENST00000477812 RIPPLY1Q0D2K3 151 aa16.96■□□□□ 0.31
ACTB-210ENST00000477812 TPBGQ13641 420 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms